RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
CSTF1-205ENST00000490539 ADCY10Q96PN6 1610 aa7.32□□□□□ -1.24
CSTF1-205ENST00000490539 POM121CA8CG34 1229 aa7.32□□□□□ -1.24
CSTF1-205ENST00000490539 GTF2E1P29083 439 aaPredicted RBP7.32□□□□□ -1.24
CSTF1-205ENST00000490539 SCTRP47872 440 aa7.32□□□□□ -1.24
CSTF1-205ENST00000490539 MARSP56192 900 aaKnown RBP7.32□□□□□ -1.24
CSTF1-205ENST00000490539 CDCA7Q9BWT1 371 aaPredicted RBP7.32□□□□□ -1.24
CSTF1-205ENST00000490539 CDK11AQ9UQ88 783 aaPredicted RBP7.32□□□□□ -1.24
CSTF1-205ENST00000490539 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
CSTF1-205ENST00000490539 A0A1W2PRU2 124 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 TRAK2O60296 914 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 GPC1P35052 558 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 SLC27A3Q5K4L6 730 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 GLMNQ92990 594 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 OSBPL3Q9H4L5 887 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 CHIC2Q9UKJ5 165 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 NOD1Q9Y239 953 aa7.31□□□□□ -1.24
CSTF1-205ENST00000490539 PLEKHD1A6NEE1 506 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 FIGNL2A6NMB9 653 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 ARHGEF15O94989 841 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 SLURP2P0DP57 97 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 CTSOP43234 321 aaPredicted RBP7.3□□□□□ -1.24
CSTF1-205ENST00000490539 CLN3Q13286 438 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 RNFT1Q5M7Z0 435 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 SCARF2Q96GP6 870 aaPredicted RBP7.3□□□□□ -1.24
CSTF1-205ENST00000490539 ZMYND15Q9H091 742 aa7.3□□□□□ -1.24
CSTF1-205ENST00000490539 SAMD9Q5K651 1589 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 FHOD3Q2V2M9 1422 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 ASXL2Q76L83 1435 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 KDM5BQ9UGL1 1544 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 ARID3CA6NKF2 412 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 RNF144AP50876 292 aaPredicted RBP7.29□□□□□ -1.24
CSTF1-205ENST00000490539 TSGA10IPQ3SY00 556 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 ERICH6Q7L0X2 663 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 LYSMD3Q7Z3D4 306 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 TRIM50Q86XT4 487 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 CCDC155Q8N6L0 562 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 WHAMMQ8TF30 809 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 ARHGEF10LQ9HCE6 1279 aa7.29□□□□□ -1.24
CSTF1-205ENST00000490539 LTBP4Q8N2S1 1624 aa7.28□□□□□ -1.24
CSTF1-205ENST00000490539 PIK3CDO00329 1044 aa7.28□□□□□ -1.24
CSTF1-205ENST00000490539 XP32Q5T750 250 aa7.28□□□□□ -1.24
CSTF1-205ENST00000490539 RBM19Q9Y4C8 960 aaKnown RBP7.28□□□□□ -1.24
CSTF1-205ENST00000490539 CLIP1P30622 1438 aa7.27□□□□□ -1.24
CSTF1-205ENST00000490539 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 ATP9BO43861 1147 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 ATP1A2P50993 1020 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 PSME1Q06323 249 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 KDF1Q8NAX2 398 aaPredicted RBP7.27□□□□□ -1.25
CSTF1-205ENST00000490539 RNF217Q8TC41 542 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 CNKSR1Q969H4 720 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 ESYT1Q9BSJ8 1104 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 ZNF777Q9ULD5 760 aaPredicted RBP7.27□□□□□ -1.25
CSTF1-205ENST00000490539 WDR7Q9Y4E6 1490 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 ABCA8O94911 1581 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 RAPGEF6Q8TEU7 1601 aa7.27□□□□□ -1.25
CSTF1-205ENST00000490539 NCOA4Q13772 614 aa7.26□□□□□ -1.25
CSTF1-205ENST00000490539 SV2AQ7L0J3 742 aa7.26□□□□□ -1.25
CSTF1-205ENST00000490539 PRICKLE2Q7Z3G6 844 aa7.26□□□□□ -1.25
CSTF1-205ENST00000490539 PLEKHM2Q8IWE5 1019 aa7.26□□□□□ -1.25
CSTF1-205ENST00000490539 ADAMTS19Q8TE59 1207 aa7.26□□□□□ -1.25
CSTF1-205ENST00000490539 RAB6BQ9NRW1 208 aa7.26□□□□□ -1.25
CSTF1-205ENST00000490539 ZCCHC11Q5TAX3 1644 aaKnown RBP7.26□□□□□ -1.25
CSTF1-205ENST00000490539 GLI2P10070 1586 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 CDC14CA4D256 554 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 SLC35F4A4IF30 521 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 ITGA6P23229 1130 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 GNASQ5JWF2 1037 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 C14orf37Q86TY3 774 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 VWA5B2Q8N398 1253 aa7.25□□□□□ -1.25
CSTF1-205ENST00000490539 RGS17Q9UGC6 210 aaPredicted RBP7.25□□□□□ -1.25
CSTF1-205ENST00000490539 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 ARHGAP35Q9NRY4 1499 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 BACH1O14867 736 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 GTF2IP78347 998 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 FOXD4L5Q5VV16 416 aaPredicted RBP7.24□□□□□ -1.25
CSTF1-205ENST00000490539 TMEM214Q6NUQ4 689 aaKnown RBP7.24□□□□□ -1.25
CSTF1-205ENST00000490539 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 DEPDC4Q8N2C3 294 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 XAGE2Q96GT9 111 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 ZSCAN10Q96SZ4 725 aaPredicted RBP7.24□□□□□ -1.25
CSTF1-205ENST00000490539 TFIP11Q9UBB9 837 aaKnown RBP7.24□□□□□ -1.25
CSTF1-205ENST00000490539 PTPRTO14522 1441 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 ATP10BO94823 1461 aa7.24□□□□□ -1.25
CSTF1-205ENST00000490539 HECW1Q76N89 1606 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 EPRSP07814 1512 aaKnown RBP7.23□□□□□ -1.25
CSTF1-205ENST00000490539 INHAP05111 366 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 HSPA1LP34931 641 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 GDF10P55107 478 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 MAP3K10Q02779 954 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 CENPCQ03188 943 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 WDR44Q5JSH3 913 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 PPP1R12CQ9BZL4 782 aa7.23□□□□□ -1.25
CSTF1-205ENST00000490539 CEP162Q5TB80 1403 aa7.22□□□□□ -1.25
CSTF1-205ENST00000490539 CD109Q6YHK3 1445 aa7.22□□□□□ -1.25
CSTF1-205ENST00000490539 YEATS2Q9ULM3 1422 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms