RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 COL15A1P39059 1388 aa23.1■■□□□ 1.29
SEC13-218ENST00000490283 C4AP0C0L4 1744 aa23.08■■□□□ 1.29
SEC13-218ENST00000490283 A0A087WZG4 1122 aa23.08■■□□□ 1.29
SEC13-218ENST00000490283 DCTN1Q14203 1278 aa23.08■■□□□ 1.29
SEC13-218ENST00000490283 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
SEC13-218ENST00000490283 YBX3P16989 372 aaKnown RBP eCLIP23.07■■□□□ 1.282e-11■■□□□ 14.4
SEC13-218ENST00000490283 FKBP8Q14318 412 aa23.07■■□□□ 1.28
SEC13-218ENST00000490283 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
SEC13-218ENST00000490283 USPL1Q5W0Q7 1092 aa23.07■■□□□ 1.28
SEC13-218ENST00000490283 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
SEC13-218ENST00000490283 NARFQ9UHQ1 456 aa23.07■■□□□ 1.28
SEC13-218ENST00000490283 TAF7Q15545 349 aaPredicted RBP23.06■■□□□ 1.28
SEC13-218ENST00000490283 TGFB2P61812 414 aa23.05■■□□□ 1.28
SEC13-218ENST00000490283 ZNF330Q9Y3S2 320 aaPredicted RBP23.05■■□□□ 1.28
SEC13-218ENST00000490283 KCNQ3O43525 872 aa23.04■■□□□ 1.28
SEC13-218ENST00000490283 WDR43Q15061 677 aaKnown RBP eCLIP23.04■■□□□ 1.281e-6■■■□□ 17.5
SEC13-218ENST00000490283 PNISRQ8TF01 805 aaKnown RBP23.04■■□□□ 1.28
SEC13-218ENST00000490283 C10orf71Q711Q0 1435 aa23.04■■□□□ 1.28
SEC13-218ENST00000490283 SNRPA1P09661 255 aaKnown RBP23.03■■□□□ 1.28
SEC13-218ENST00000490283 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
SEC13-218ENST00000490283 EIF5P55010 431 aaKnown RBP23.02■■□□□ 1.28
SEC13-218ENST00000490283 WWC3Q9ULE0 1092 aa23.02■■□□□ 1.28
SEC13-218ENST00000490283 DDR1Q08345 913 aa23■■□□□ 1.27
SEC13-218ENST00000490283 PRKRIP1Q9H875 184 aaPredicted RBP23■■□□□ 1.27
SEC13-218ENST00000490283 CHD4Q14839 1912 aa23■■□□□ 1.27
SEC13-218ENST00000490283 PXDNLA1KZ92 1463 aa22.99■■□□□ 1.27
SEC13-218ENST00000490283 POLRMTO00411 1230 aaKnown RBP22.99■■□□□ 1.27
SEC13-218ENST00000490283 A1BGP04217 495 aa22.99■■□□□ 1.27
SEC13-218ENST00000490283 TM4SF1P30408 202 aa22.99■■□□□ 1.27
SEC13-218ENST00000490283 LMOD3Q0VAK6 560 aa22.99■■□□□ 1.27
SEC13-218ENST00000490283 A0A0G2JLW4 131 aa22.98■■□□□ 1.27
SEC13-218ENST00000490283 ZNF784Q8NCA9 323 aaPredicted RBP22.98■■□□□ 1.27
SEC13-218ENST00000490283 RIPK4P57078 832 aa22.97■■□□□ 1.27
SEC13-218ENST00000490283 NFIXQ14938 502 aa22.97■■□□□ 1.27
SEC13-218ENST00000490283 MIS18AQ9NYP9 233 aa22.97■■□□□ 1.27
SEC13-218ENST00000490283 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
SEC13-218ENST00000490283 DPEP1P16444 411 aa22.96■■□□□ 1.27
SEC13-218ENST00000490283 TBC1D2BQ9UPU7 963 aa22.96■■□□□ 1.27
SEC13-218ENST00000490283 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
SEC13-218ENST00000490283 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
SEC13-218ENST00000490283 BICDL1Q6ZP65 573 aa22.95■■□□□ 1.26
SEC13-218ENST00000490283 THUMPD2Q9BTF0 503 aaKnown RBP22.95■■□□□ 1.26
SEC13-218ENST00000490283 BCL2L12Q9HB09 334 aa22.95■■□□□ 1.26
SEC13-218ENST00000490283 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
SEC13-218ENST00000490283 SERPINB2P05120 415 aa22.94■■□□□ 1.26
SEC13-218ENST00000490283 TMPOP42166 694 aaKnown RBP22.94■■□□□ 1.26
SEC13-218ENST00000490283 DZIP3Q86Y13 1208 aaKnown RBP22.94■■□□□ 1.26
SEC13-218ENST00000490283 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
SEC13-218ENST00000490283 RUNDC1Q96C34 613 aa22.93■■□□□ 1.26
SEC13-218ENST00000490283 PIM2Q9P1W9 311 aa22.93■■□□□ 1.26
SEC13-218ENST00000490283 UTRNP46939 3433 aa22.92■■□□□ 1.26
SEC13-218ENST00000490283 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
SEC13-218ENST00000490283 PIP4K2AP48426 406 aaPredicted RBP22.91■■□□□ 1.26
SEC13-218ENST00000490283 TSPYL4Q9UJ04 414 aa22.91■■□□□ 1.26
SEC13-218ENST00000490283 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
SEC13-218ENST00000490283 NPHP1O15259 732 aa22.9■■□□□ 1.26
SEC13-218ENST00000490283 NEUROD2Q15784 382 aa22.9■■□□□ 1.26
SEC13-218ENST00000490283 TBC1D9BQ66K14 1250 aa22.9■■□□□ 1.26
SEC13-218ENST00000490283 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.26
SEC13-218ENST00000490283 CAMTA2O94983 1202 aa22.89■■□□□ 1.25
SEC13-218ENST00000490283 EIF4A1P60842 406 aaKnown RBP22.89■■□□□ 1.25
SEC13-218ENST00000490283 DALRD3Q5D0E6 543 aaKnown RBP22.89■■□□□ 1.25
SEC13-218ENST00000490283 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
SEC13-218ENST00000490283 ADAMTS8Q9UP79 889 aa22.89■■□□□ 1.25
SEC13-218ENST00000490283 RRP7AQ9Y3A4 280 aaKnown RBP22.89■■□□□ 1.25
SEC13-218ENST00000490283 N4BP2Q86UW6 1770 aaPredicted RBP22.89■■□□□ 1.25
SEC13-218ENST00000490283 SCN7AQ01118 1682 aa22.88■■□□□ 1.25
SEC13-218ENST00000490283 ZNF316A6NFI3 1004 aaPredicted RBP22.88■■□□□ 1.25
SEC13-218ENST00000490283 GIGYF1O75420 1035 aaPredicted RBP22.88■■□□□ 1.25
SEC13-218ENST00000490283 BABAM1Q9NWV8 329 aa22.88■■□□□ 1.25
SEC13-218ENST00000490283 KIAA1551Q9HCM1 1747 aa22.88■■□□□ 1.25
SEC13-218ENST00000490283 CHRNA5P30532 468 aa22.87■■□□□ 1.25
SEC13-218ENST00000490283 KCNA3P22001 575 aa22.86■■□□□ 1.25
SEC13-218ENST00000490283 CLEC4GQ6UXB4 293 aa22.86■■□□□ 1.25
SEC13-218ENST00000490283 ARHGAP27Q6ZUM4 889 aa22.86■■□□□ 1.25
SEC13-218ENST00000490283 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
SEC13-218ENST00000490283 GOLGB1Q14789 3259 aaKnown RBP22.85■■□□□ 1.25
SEC13-218ENST00000490283 NBPF26B4DH59 902 aa22.85■■□□□ 1.25
SEC13-218ENST00000490283 NBPF10Q6P3W6 841 aaKnown RBP22.85■■□□□ 1.25
SEC13-218ENST00000490283 NBPF15Q8N660 670 aa22.85■■□□□ 1.25
SEC13-218ENST00000490283 H0YIN7 160 aa22.84■■□□□ 1.25
SEC13-218ENST00000490283 RGL2O15211 777 aa22.84■■□□□ 1.25
SEC13-218ENST00000490283 CNBD1Q8NA66 436 aa22.84■■□□□ 1.25
SEC13-218ENST00000490283 PDZRN3Q9UPQ7 1066 aa22.84■■□□□ 1.25
SEC13-218ENST00000490283 PDE6BP35913 854 aa22.83■■□□□ 1.25
SEC13-218ENST00000490283 ST5P78524 1137 aa22.83■■□□□ 1.25
SEC13-218ENST00000490283 C2CD5Q86YS7 1000 aa22.83■■□□□ 1.25
SEC13-218ENST00000490283 LAMB4A4D0S4 1761 aa22.83■■□□□ 1.24
SEC13-218ENST00000490283 NRXN2Q9P2S2 1712 aa22.82■■□□□ 1.24
SEC13-218ENST00000490283 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
SEC13-218ENST00000490283 BRIP1Q9BX63 1249 aa22.82■■□□□ 1.24
SEC13-218ENST00000490283 ATP10DQ9P241 1426 aa22.82■■□□□ 1.24
SEC13-218ENST00000490283 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
SEC13-218ENST00000490283 AFDNP55196 1824 aaKnown RBP22.81■■□□□ 1.24
SEC13-218ENST00000490283 PRR5LQ6MZQ0 368 aa22.81■■□□□ 1.24
SEC13-218ENST00000490283 KIF6Q6ZMV9 814 aa22.81■■□□□ 1.24
SEC13-218ENST00000490283 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
SEC13-218ENST00000490283 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
SEC13-218ENST00000490283 MYL6BP14649 208 aa22.8■■□□□ 1.24
SEC13-218ENST00000490283 NIP7Q9Y221 180 aaKnown RBP eCLIP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms