RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TAS1R3Q7RTX0 852 aa10.38□□□□□ -0.75
VPS26A-206ENST00000489794 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
VPS26A-206ENST00000489794 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
VPS26A-206ENST00000489794 HIRAP54198 1017 aaPredicted RBP10.37□□□□□ -0.75
VPS26A-206ENST00000489794 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
VPS26A-206ENST00000489794 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
VPS26A-206ENST00000489794 CABP1Q9NZU7 370 aa10.37□□□□□ -0.75
VPS26A-206ENST00000489794 MAN1A2O60476 641 aa10.36□□□□□ -0.75
VPS26A-206ENST00000489794 WFS1O76024 890 aa10.36□□□□□ -0.75
VPS26A-206ENST00000489794 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
VPS26A-206ENST00000489794 POTEAQ6S8J7 498 aa10.36□□□□□ -0.75
VPS26A-206ENST00000489794 C2orf49Q9BVC5 232 aaPredicted RBP10.36□□□□□ -0.75
VPS26A-206ENST00000489794 CARNS1A5YM72 827 aa10.35□□□□□ -0.75
VPS26A-206ENST00000489794 C21orf2O43822 256 aa10.35□□□□□ -0.75
VPS26A-206ENST00000489794 ARID4AP29374 1257 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-206ENST00000489794 NOS2P35228 1153 aa10.35□□□□□ -0.75
VPS26A-206ENST00000489794 LCE2AQ5TA79 106 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-206ENST00000489794 NBPF10Q6P3W6 841 aaKnown RBP10.35□□□□□ -0.75
VPS26A-206ENST00000489794 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
VPS26A-206ENST00000489794 SLAIN2Q9P270 581 aa10.35□□□□□ -0.75
VPS26A-206ENST00000489794 NBPF1Q3BBV0 1214 aa10.34□□□□□ -0.75
VPS26A-206ENST00000489794 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
VPS26A-206ENST00000489794 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
VPS26A-206ENST00000489794 C4orf17Q53FE4 359 aa10.33□□□□□ -0.76
VPS26A-206ENST00000489794 ZNF295-AS1Q8N0V1 137 aa10.33□□□□□ -0.76
VPS26A-206ENST00000489794 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
VPS26A-206ENST00000489794 L3MBTL2Q969R5 705 aa10.33□□□□□ -0.76
VPS26A-206ENST00000489794 FIGNL2A6NMB9 653 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 POU4F2Q12837 409 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 FKBP5Q13451 457 aaPredicted RBP10.32□□□□□ -0.76
VPS26A-206ENST00000489794 TBCELQ5QJ74 424 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 ZDHHC3Q9NYG2 299 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 GPC6Q9Y625 555 aaPredicted RBP10.32□□□□□ -0.76
VPS26A-206ENST00000489794 USP3Q9Y6I4 520 aa10.32□□□□□ -0.76
VPS26A-206ENST00000489794 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
VPS26A-206ENST00000489794 EML1O00423 815 aa10.31□□□□□ -0.76
VPS26A-206ENST00000489794 LGR5O75473 907 aa10.31□□□□□ -0.76
VPS26A-206ENST00000489794 PLA2G4AP47712 749 aa10.31□□□□□ -0.76
VPS26A-206ENST00000489794 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
VPS26A-206ENST00000489794 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
VPS26A-206ENST00000489794 TATP17735 454 aaPredicted RBP10.3□□□□□ -0.76
VPS26A-206ENST00000489794 HIF1AQ16665 826 aa10.3□□□□□ -0.76
VPS26A-206ENST00000489794 ZDHHC1Q8WTX9 485 aa10.3□□□□□ -0.76
VPS26A-206ENST00000489794 TIMMDC1Q9NPL8 285 aa10.3□□□□□ -0.76
VPS26A-206ENST00000489794 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
VPS26A-206ENST00000489794 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
VPS26A-206ENST00000489794 ZBTB7CA1YPR0 619 aa10.29□□□□□ -0.76
VPS26A-206ENST00000489794 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
VPS26A-206ENST00000489794 AEBP1Q8IUX7 1158 aa10.29□□□□□ -0.76
VPS26A-206ENST00000489794 PHKA2P46019 1235 aa10.28□□□□□ -0.76
VPS26A-206ENST00000489794 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.77
VPS26A-206ENST00000489794 AIDAQ96BJ3 306 aa10.27□□□□□ -0.77
VPS26A-206ENST00000489794 RHOQP17081 205 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 RTN1Q16799 776 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 C16orf46Q6P387 395 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 ALDH16A1Q8IZ83 802 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 MYO19Q96H55 970 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 EGFL7Q9UHF1 273 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 PARP3Q9Y6F1 533 aa10.26□□□□□ -0.77
VPS26A-206ENST00000489794 F11P03951 625 aa10.25□□□□□ -0.77
VPS26A-206ENST00000489794 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
VPS26A-206ENST00000489794 PHACTR1Q9C0D0 580 aa10.25□□□□□ -0.77
VPS26A-206ENST00000489794 PTSQ03393 145 aa10.24□□□□□ -0.77
VPS26A-206ENST00000489794 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
VPS26A-206ENST00000489794 LBRQ14739 615 aaKnown RBP10.24□□□□□ -0.77
VPS26A-206ENST00000489794 PGBD3Q8N328 593 aa10.24□□□□□ -0.77
VPS26A-206ENST00000489794 SLC16A10Q8TF71 515 aa10.24□□□□□ -0.77
VPS26A-206ENST00000489794 HCN4Q9Y3Q4 1203 aa10.24□□□□□ -0.77
VPS26A-206ENST00000489794 WIPF1O43516 503 aa10.23□□□□□ -0.77
VPS26A-206ENST00000489794 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
VPS26A-206ENST00000489794 ANKIB1Q9P2G1 1089 aa10.23□□□□□ -0.77
VPS26A-206ENST00000489794 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
VPS26A-206ENST00000489794 SLC35F4A4IF30 521 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 MSX1P28360 303 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 TXLNAP40222 546 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 RHPN1Q8TCX5 695 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 HELQQ8TDG4 1101 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 CRISPLD1Q9H336 500 aa10.22□□□□□ -0.77
VPS26A-206ENST00000489794 QTRT2Q9H974 415 aaKnown RBP10.22□□□□□ -0.77
VPS26A-206ENST00000489794 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 H7C1W4 665 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
VPS26A-206ENST00000489794 SH3PXD2AQ5TCZ1 1133 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 BICDL1Q6ZP65 573 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 GTF3C2Q8WUA4 911 aaPredicted RBP10.21□□□□□ -0.77
VPS26A-206ENST00000489794 NEUROD4Q9HD90 331 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 IVNS1ABPQ9Y6Y0 642 aa10.21□□□□□ -0.77
VPS26A-206ENST00000489794 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
VPS26A-206ENST00000489794 ATP4AP20648 1035 aa10.2□□□□□ -0.78
VPS26A-206ENST00000489794 C11orf91Q3C1V1 193 aa10.2□□□□□ -0.78
VPS26A-206ENST00000489794 ARSJQ5FYB0 599 aaPredicted RBP10.2□□□□□ -0.78
VPS26A-206ENST00000489794 EFHC2Q5JST6 749 aa10.2□□□□□ -0.78
VPS26A-206ENST00000489794 GAS2L1Q99501 681 aaPredicted RBP10.2□□□□□ -0.78
VPS26A-206ENST00000489794 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
VPS26A-206ENST00000489794 BRD2P25440 801 aaKnown RBP10.19□□□□□ -0.78
VPS26A-206ENST00000489794 NAA30Q147X3 362 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms