RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
GGPS1-207ENST00000489692 COL15A1P39059 1388 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 UTRNP46939 3433 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 A0A087WZG4 1122 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 DCTN1Q14203 1278 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 BICDL1Q6ZP65 573 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 NARFQ9UHQ1 456 aa15.5■□□□□ 0.07
GGPS1-207ENST00000489692 CICQ96RK0 1608 aaPredicted RBP15.5■□□□□ 0.07
GGPS1-207ENST00000489692 HEG1Q9ULI3 1381 aa15.49■□□□□ 0.07
GGPS1-207ENST00000489692 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
GGPS1-207ENST00000489692 KCNQ3O43525 872 aa15.49■□□□□ 0.07
GGPS1-207ENST00000489692 GIGYF1O75420 1035 aaPredicted RBP15.49■□□□□ 0.07
GGPS1-207ENST00000489692 DDR1Q08345 913 aa15.49■□□□□ 0.07
GGPS1-207ENST00000489692 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
GGPS1-207ENST00000489692 MAPK8IP3Q9UPT6 1336 aa15.48■□□□□ 0.07
GGPS1-207ENST00000489692 RALBP1Q15311 655 aa15.48■□□□□ 0.07
GGPS1-207ENST00000489692 ARHGAP27Q6ZUM4 889 aa15.48■□□□□ 0.07
GGPS1-207ENST00000489692 SUPT16HQ9Y5B9 1047 aaKnown RBP15.48■□□□□ 0.07
GGPS1-207ENST00000489692 KCPQ6ZWJ8 1503 aa15.48■□□□□ 0.07
GGPS1-207ENST00000489692 GOLGB1Q14789 3259 aaKnown RBP15.48■□□□□ 0.07
GGPS1-207ENST00000489692 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
GGPS1-207ENST00000489692 NPHP1O15259 732 aa15.47■□□□□ 0.07
GGPS1-207ENST00000489692 HNRNPUQ00839 825 aaKnown RBP eCLIP15.47■□□□□ 0.07
GGPS1-207ENST00000489692 CCDC184Q52MB2 194 aa15.47■□□□□ 0.07
GGPS1-207ENST00000489692 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
GGPS1-207ENST00000489692 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
GGPS1-207ENST00000489692 TBC1D2BQ9UPU7 963 aa15.47■□□□□ 0.07
GGPS1-207ENST00000489692 CEMIPQ8WUJ3 1361 aa15.47■□□□□ 0.07
GGPS1-207ENST00000489692 SCN11AQ9UI33 1791 aa15.47■□□□□ 0.07
GGPS1-207ENST00000489692 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
GGPS1-207ENST00000489692 A1BGP04217 495 aa15.46■□□□□ 0.07
GGPS1-207ENST00000489692 TM4SF1P30408 202 aa15.46■□□□□ 0.07
GGPS1-207ENST00000489692 NFIXQ14938 502 aa15.46■□□□□ 0.07
GGPS1-207ENST00000489692 PIM2Q9P1W9 311 aa15.46■□□□□ 0.07
GGPS1-207ENST00000489692 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
GGPS1-207ENST00000489692 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
GGPS1-207ENST00000489692 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
GGPS1-207ENST00000489692 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
GGPS1-207ENST00000489692 SERPINB2P05120 415 aa15.45■□□□□ 0.06
GGPS1-207ENST00000489692 CHRNA5P30532 468 aa15.45■□□□□ 0.06
GGPS1-207ENST00000489692 EIF5P55010 431 aaKnown RBP15.45■□□□□ 0.06
GGPS1-207ENST00000489692 DALRD3Q5D0E6 543 aaKnown RBP15.45■□□□□ 0.06
GGPS1-207ENST00000489692 GPBP1L1Q9HC44 474 aaPredicted RBP15.45■□□□□ 0.06
GGPS1-207ENST00000489692 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
GGPS1-207ENST00000489692 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
GGPS1-207ENST00000489692 SNRPA1P09661 255 aaKnown RBP15.44■□□□□ 0.06
GGPS1-207ENST00000489692 IL6STP40189 918 aaPredicted RBP15.44■□□□□ 0.06
GGPS1-207ENST00000489692 PIP4K2AP48426 406 aaPredicted RBP15.44■□□□□ 0.06
GGPS1-207ENST00000489692 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
GGPS1-207ENST00000489692 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
GGPS1-207ENST00000489692 TJP1Q07157 1748 aa15.43■□□□□ 0.06
GGPS1-207ENST00000489692 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
GGPS1-207ENST00000489692 PRAMEF22A3QJZ6 481 aa15.42■□□□□ 0.06
GGPS1-207ENST00000489692 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
GGPS1-207ENST00000489692 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
GGPS1-207ENST00000489692 DZIP3Q86Y13 1208 aaKnown RBP15.42■□□□□ 0.06
GGPS1-207ENST00000489692 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
GGPS1-207ENST00000489692 C4AP0C0L4 1744 aa15.41■□□□□ 0.06
GGPS1-207ENST00000489692 SENP3-EIF4A1A0A087X0R7 540 aa15.41■□□□□ 0.06
GGPS1-207ENST00000489692 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
GGPS1-207ENST00000489692 PNISRQ8TF01 805 aaKnown RBP15.41■□□□□ 0.06
GGPS1-207ENST00000489692 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
GGPS1-207ENST00000489692 NEFLP07196 543 aa15.4■□□□□ 0.06
GGPS1-207ENST00000489692 KCNA3P22001 575 aa15.4■□□□□ 0.06
GGPS1-207ENST00000489692 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
GGPS1-207ENST00000489692 C2CD5Q86YS7 1000 aa15.4■□□□□ 0.06
GGPS1-207ENST00000489692 SETDB2Q96T68 719 aa15.4■□□□□ 0.06
GGPS1-207ENST00000489692 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
GGPS1-207ENST00000489692 ADAMTS7Q9UKP4 1686 aa15.39■□□□□ 0.05
GGPS1-207ENST00000489692 H0YIN7 160 aa15.39■□□□□ 0.05
GGPS1-207ENST00000489692 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
GGPS1-207ENST00000489692 NGEFQ8N5V2 710 aa15.39■□□□□ 0.05
GGPS1-207ENST00000489692 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
GGPS1-207ENST00000489692 RIPK4P57078 832 aa15.38■□□□□ 0.05
GGPS1-207ENST00000489692 NEUROD2Q15784 382 aa15.38■□□□□ 0.05
GGPS1-207ENST00000489692 C9orf131Q5VYM1 1079 aa15.38■□□□□ 0.05
GGPS1-207ENST00000489692 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
GGPS1-207ENST00000489692 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.05
GGPS1-207ENST00000489692 ZNF652Q9Y2D9 606 aa15.38■□□□□ 0.05
GGPS1-207ENST00000489692 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
GGPS1-207ENST00000489692 ST5P78524 1137 aa15.37■□□□□ 0.05
GGPS1-207ENST00000489692 CCDC146Q8IYE0 955 aa15.37■□□□□ 0.05
GGPS1-207ENST00000489692 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
GGPS1-207ENST00000489692 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
GGPS1-207ENST00000489692 FAM177BA6PVY3 158 aa15.36■□□□□ 0.05
GGPS1-207ENST00000489692 PDE6BP35913 854 aa15.36■□□□□ 0.05
GGPS1-207ENST00000489692 NBPF5PQ86XG9 351 aaPredicted RBP15.36■□□□□ 0.05
GGPS1-207ENST00000489692 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
GGPS1-207ENST00000489692 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
GGPS1-207ENST00000489692 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
GGPS1-207ENST00000489692 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
GGPS1-207ENST00000489692 CHD4Q14839 1912 aa15.35■□□□□ 0.05
GGPS1-207ENST00000489692 LMOD3Q0VAK6 560 aa15.35■□□□□ 0.05
GGPS1-207ENST00000489692 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
GGPS1-207ENST00000489692 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
GGPS1-207ENST00000489692 ADCY9O60503 1353 aa15.35■□□□□ 0.05
GGPS1-207ENST00000489692 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
GGPS1-207ENST00000489692 MYL6BP14649 208 aa15.34■□□□□ 0.05
GGPS1-207ENST00000489692 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms