RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 RGS12O14924 1447 aa18.07■□□□□ 0.48
VPS26A-205ENST00000489656 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
VPS26A-205ENST00000489656 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
VPS26A-205ENST00000489656 EXOC6Q8TAG9 804 aa18.07■□□□□ 0.48
VPS26A-205ENST00000489656 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
VPS26A-205ENST00000489656 PPP4R2Q9NY27 417 aa18.07■□□□□ 0.48
VPS26A-205ENST00000489656 TCERG1O14776 1098 aaKnown RBP18.06■□□□□ 0.48
VPS26A-205ENST00000489656 ABCC4O15439 1325 aa18.05■□□□□ 0.48
VPS26A-205ENST00000489656 RLBP1P12271 317 aa18.05■□□□□ 0.48
VPS26A-205ENST00000489656 FTSJ3Q8IY81 847 aaKnown RBP18.05■□□□□ 0.48
VPS26A-205ENST00000489656 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
VPS26A-205ENST00000489656 TNNQ9UQP3 1299 aa18.05■□□□□ 0.48
VPS26A-205ENST00000489656 LY75O60449 1722 aa18.05■□□□□ 0.48
VPS26A-205ENST00000489656 COL5A3P25940 1745 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-205ENST00000489656 RREB1Q92766 1687 aa18.04■□□□□ 0.48
VPS26A-205ENST00000489656 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
VPS26A-205ENST00000489656 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
VPS26A-205ENST00000489656 AAMPQ13685 434 aa18.04■□□□□ 0.48
VPS26A-205ENST00000489656 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
VPS26A-205ENST00000489656 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
VPS26A-205ENST00000489656 ATG3Q9NT62 314 aa18.04■□□□□ 0.48
VPS26A-205ENST00000489656 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
VPS26A-205ENST00000489656 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
VPS26A-205ENST00000489656 A0A0G2JS52 829 aa18.03■□□□□ 0.48
VPS26A-205ENST00000489656 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
VPS26A-205ENST00000489656 RBM6P78332 1123 aaKnown RBP18.03■□□□□ 0.48
VPS26A-205ENST00000489656 MYT1Q01538 1121 aa18.03■□□□□ 0.48
VPS26A-205ENST00000489656 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.48
VPS26A-205ENST00000489656 FLIIQ13045 1269 aa18.02■□□□□ 0.48
VPS26A-205ENST00000489656 MVPQ14764 893 aaKnown RBP18.02■□□□□ 0.48
VPS26A-205ENST00000489656 G2E3Q7L622 706 aa18.02■□□□□ 0.48
VPS26A-205ENST00000489656 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.48
VPS26A-205ENST00000489656 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.48
VPS26A-205ENST00000489656 ASAP1Q9ULH1 1129 aa18.02■□□□□ 0.48
VPS26A-205ENST00000489656 ARFGEF2Q9Y6D5 1785 aa18.02■□□□□ 0.47
VPS26A-205ENST00000489656 NUP188Q5SRE5 1749 aa18.01■□□□□ 0.47
VPS26A-205ENST00000489656 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
VPS26A-205ENST00000489656 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
VPS26A-205ENST00000489656 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
VPS26A-205ENST00000489656 TAF1LQ8IZX4 1826 aa18■□□□□ 0.47
VPS26A-205ENST00000489656 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
VPS26A-205ENST00000489656 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
VPS26A-205ENST00000489656 HYPKQ9NX55 129 aa18■□□□□ 0.47
VPS26A-205ENST00000489656 PDIA6Q15084 440 aa17.99■□□□□ 0.47
VPS26A-205ENST00000489656 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
VPS26A-205ENST00000489656 ACSBG1Q96GR2 724 aa17.99■□□□□ 0.47
VPS26A-205ENST00000489656 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
VPS26A-205ENST00000489656 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
VPS26A-205ENST00000489656 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
VPS26A-205ENST00000489656 PTCD1O75127 700 aaKnown RBP17.98■□□□□ 0.47
VPS26A-205ENST00000489656 INTS3Q68E01 1043 aaKnown RBP17.98■□□□□ 0.47
VPS26A-205ENST00000489656 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
VPS26A-205ENST00000489656 MYH14Q7Z406 1995 aaKnown RBP17.98■□□□□ 0.47
VPS26A-205ENST00000489656 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-205ENST00000489656 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
VPS26A-205ENST00000489656 LRP10Q7Z4F1 713 aa17.96■□□□□ 0.47
VPS26A-205ENST00000489656 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
VPS26A-205ENST00000489656 CHMP4BQ9H444 224 aaKnown RBP17.96■□□□□ 0.47
VPS26A-205ENST00000489656 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
VPS26A-205ENST00000489656 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
VPS26A-205ENST00000489656 KCNQ2O43526 872 aa17.95■□□□□ 0.46
VPS26A-205ENST00000489656 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
VPS26A-205ENST00000489656 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
VPS26A-205ENST00000489656 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
VPS26A-205ENST00000489656 CCT4P50991 539 aaKnown RBP17.94■□□□□ 0.46
VPS26A-205ENST00000489656 KRT27Q7Z3Y8 459 aa17.94■□□□□ 0.46
VPS26A-205ENST00000489656 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
VPS26A-205ENST00000489656 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
VPS26A-205ENST00000489656 ADCY9O60503 1353 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
VPS26A-205ENST00000489656 STARD3NLO95772 234 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 ANXA1P04083 346 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 RXRBP28702 533 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 DNAJC10Q8IXB1 793 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
VPS26A-205ENST00000489656 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
VPS26A-205ENST00000489656 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
VPS26A-205ENST00000489656 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
VPS26A-205ENST00000489656 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
VPS26A-205ENST00000489656 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
VPS26A-205ENST00000489656 NUP98P52948 1817 aa17.92■□□□□ 0.46
VPS26A-205ENST00000489656 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
VPS26A-205ENST00000489656 F6X3S4 739 aa17.91■□□□□ 0.46
VPS26A-205ENST00000489656 ZBTB7BO15156 539 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-205ENST00000489656 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
VPS26A-205ENST00000489656 SIK1P57059 783 aa17.91■□□□□ 0.46
VPS26A-205ENST00000489656 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
VPS26A-205ENST00000489656 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
VPS26A-205ENST00000489656 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-205ENST00000489656 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
VPS26A-205ENST00000489656 TNS1Q9HBL0 1735 aaKnown RBP17.9■□□□□ 0.46
VPS26A-205ENST00000489656 CYP19A1P11511 503 aaPredicted RBP17.9■□□□□ 0.46
VPS26A-205ENST00000489656 DNAAF4Q8WXU2 420 aa17.9■□□□□ 0.46
VPS26A-205ENST00000489656 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
VPS26A-205ENST00000489656 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
VPS26A-205ENST00000489656 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
VPS26A-205ENST00000489656 A1BGP04217 495 aa17.89■□□□□ 0.45
VPS26A-205ENST00000489656 MYL6BP14649 208 aa17.89■□□□□ 0.45
VPS26A-205ENST00000489656 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms