RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
COL9A1-208ENST00000489611 TUBGCP6Q96RT7 1819 aa18.38■□□□□ 0.53
COL9A1-208ENST00000489611 ABCA3Q99758 1704 aa18.38■□□□□ 0.53
COL9A1-208ENST00000489611 EPB41L2O43491 1005 aaKnown RBP18.38■□□□□ 0.53
COL9A1-208ENST00000489611 SMARCA5O60264 1052 aaPredicted RBP18.38■□□□□ 0.53
COL9A1-208ENST00000489611 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
COL9A1-208ENST00000489611 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
COL9A1-208ENST00000489611 ERC2O15083 957 aa18.37■□□□□ 0.53
COL9A1-208ENST00000489611 MCM4P33991 863 aa18.37■□□□□ 0.53
COL9A1-208ENST00000489611 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
COL9A1-208ENST00000489611 LRRFIP2Q9Y608 721 aaKnown RBP18.37■□□□□ 0.53
COL9A1-208ENST00000489611 MX1P20591 662 aa18.37■□□□□ 0.53
COL9A1-208ENST00000489611 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
COL9A1-208ENST00000489611 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
COL9A1-208ENST00000489611 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
COL9A1-208ENST00000489611 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 APBB1O00213 710 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 ALDH1L1O75891 902 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
COL9A1-208ENST00000489611 POLA2Q14181 598 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 BEND3Q5T5X7 828 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
COL9A1-208ENST00000489611 PHLPP1O60346 1717 aa18.34■□□□□ 0.53
COL9A1-208ENST00000489611 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
COL9A1-208ENST00000489611 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
COL9A1-208ENST00000489611 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
COL9A1-208ENST00000489611 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
COL9A1-208ENST00000489611 ST18O60284 1047 aa18.33■□□□□ 0.53
COL9A1-208ENST00000489611 GBP4Q96PP9 640 aa18.33■□□□□ 0.53
COL9A1-208ENST00000489611 BCL11AQ9H165 835 aa18.33■□□□□ 0.53
COL9A1-208ENST00000489611 STRN4Q9NRL3 753 aa18.33■□□□□ 0.53
COL9A1-208ENST00000489611 SPG7Q9UQ90 795 aa18.33■□□□□ 0.53
COL9A1-208ENST00000489611 WDR17Q8IZU2 1322 aa18.33■□□□□ 0.52
COL9A1-208ENST00000489611 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.52
COL9A1-208ENST00000489611 MTX1Q13505 466 aa18.33■□□□□ 0.52
COL9A1-208ENST00000489611 TOM1L2Q6ZVM7 507 aa18.33■□□□□ 0.52
COL9A1-208ENST00000489611 PI4KAP1Q8N8J0 262 aa18.33■□□□□ 0.52
COL9A1-208ENST00000489611 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.52
COL9A1-208ENST00000489611 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.52
COL9A1-208ENST00000489611 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
COL9A1-208ENST00000489611 KSR2Q6VAB6 950 aa18.31■□□□□ 0.52
COL9A1-208ENST00000489611 KIF1BPQ96EK5 621 aa18.31■□□□□ 0.52
COL9A1-208ENST00000489611 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
COL9A1-208ENST00000489611 MCCP23508 829 aa18.31■□□□□ 0.52
COL9A1-208ENST00000489611 EVA1CP58658 441 aa18.31■□□□□ 0.52
COL9A1-208ENST00000489611 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
COL9A1-208ENST00000489611 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
COL9A1-208ENST00000489611 ADCY9O60503 1353 aa18.3■□□□□ 0.52
COL9A1-208ENST00000489611 MEGF6O75095 1541 aa18.3■□□□□ 0.52
COL9A1-208ENST00000489611 ANAPC15P60006 121 aa18.3■□□□□ 0.52
COL9A1-208ENST00000489611 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
COL9A1-208ENST00000489611 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
COL9A1-208ENST00000489611 COL22A1Q8NFW1 1626 aaPredicted RBP18.3■□□□□ 0.52
COL9A1-208ENST00000489611 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
COL9A1-208ENST00000489611 MCM2P49736 904 aa18.29■□□□□ 0.52
COL9A1-208ENST00000489611 L1TD1Q5T7N2 865 aaKnown RBP18.29■□□□□ 0.52
COL9A1-208ENST00000489611 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
COL9A1-208ENST00000489611 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
COL9A1-208ENST00000489611 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
COL9A1-208ENST00000489611 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
COL9A1-208ENST00000489611 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
COL9A1-208ENST00000489611 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
COL9A1-208ENST00000489611 KCNQ3O43525 872 aa18.28■□□□□ 0.52
COL9A1-208ENST00000489611 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
COL9A1-208ENST00000489611 SKOR2Q2VWA4 1001 aaPredicted RBP18.28■□□□□ 0.52
COL9A1-208ENST00000489611 CLEC17AQ6ZS10 378 aa18.28■□□□□ 0.52
COL9A1-208ENST00000489611 MRC1P22897 1456 aa18.28■□□□□ 0.52
COL9A1-208ENST00000489611 PKD1L3Q7Z443 1732 aa18.28■□□□□ 0.52
COL9A1-208ENST00000489611 ERC1Q8IUD2 1116 aa18.27■□□□□ 0.52
COL9A1-208ENST00000489611 LINS1Q8NG48 757 aa18.27■□□□□ 0.52
COL9A1-208ENST00000489611 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
COL9A1-208ENST00000489611 IL17RAQ96F46 866 aa18.27■□□□□ 0.52
COL9A1-208ENST00000489611 ESYT1Q9BSJ8 1104 aa18.27■□□□□ 0.52
COL9A1-208ENST00000489611 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
COL9A1-208ENST00000489611 IFNL2Q8IZJ0 200 aa18.27■□□□□ 0.51
COL9A1-208ENST00000489611 ISY1Q9ULR0 285 aaKnown RBP18.27■□□□□ 0.51
COL9A1-208ENST00000489611 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
COL9A1-208ENST00000489611 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-208ENST00000489611 NUCB2P80303 420 aa18.26■□□□□ 0.51
COL9A1-208ENST00000489611 UTYO14607 1347 aa18.26■□□□□ 0.51
COL9A1-208ENST00000489611 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
COL9A1-208ENST00000489611 USP42Q9H9J4 1324 aaKnown RBP18.26■□□□□ 0.51
COL9A1-208ENST00000489611 CD2BP2O95400 341 aaKnown RBP18.25■□□□□ 0.51
COL9A1-208ENST00000489611 CHMLP26374 656 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
COL9A1-208ENST00000489611 CARD10Q9BWT7 1032 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
COL9A1-208ENST00000489611 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 GOLGA6L22H0YM25 854 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 PHKG2P15735 406 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
COL9A1-208ENST00000489611 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
COL9A1-208ENST00000489611 PARP4Q9UKK3 1724 aaKnown RBP18.25■□□□□ 0.51
COL9A1-208ENST00000489611 TRAK2O60296 914 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms