RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
CLDN11-209ENST00000489485 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.53
CLDN11-209ENST00000489485 COL5A3P25940 1745 aaPredicted RBP18.33■□□□□ 0.52
CLDN11-209ENST00000489485 SOS1Q07889 1333 aaPredicted RBP18.33■□□□□ 0.52
CLDN11-209ENST00000489485 CICQ96RK0 1608 aaPredicted RBP18.33■□□□□ 0.52
CLDN11-209ENST00000489485 CYP19A1P11511 503 aaPredicted RBP18.33■□□□□ 0.52
CLDN11-209ENST00000489485 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
CLDN11-209ENST00000489485 A1BGP04217 495 aa18.31■□□□□ 0.52
CLDN11-209ENST00000489485 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
CLDN11-209ENST00000489485 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
CLDN11-209ENST00000489485 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
CLDN11-209ENST00000489485 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
CLDN11-209ENST00000489485 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
CLDN11-209ENST00000489485 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
CLDN11-209ENST00000489485 C4BP0C0L5 1744 aa18.3■□□□□ 0.52
CLDN11-209ENST00000489485 CT47B1P0C2W7 299 aaPredicted RBP18.3■□□□□ 0.52
CLDN11-209ENST00000489485 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
CLDN11-209ENST00000489485 RREB1Q92766 1687 aa18.3■□□□□ 0.52
CLDN11-209ENST00000489485 CANXP27824 592 aaKnown RBP18.29■□□□□ 0.52
CLDN11-209ENST00000489485 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
CLDN11-209ENST00000489485 CCDC87Q9NVE4 849 aa18.29■□□□□ 0.52
CLDN11-209ENST00000489485 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
CLDN11-209ENST00000489485 MYL6BP14649 208 aa18.29■□□□□ 0.52
CLDN11-209ENST00000489485 AK7Q96M32 723 aa18.29■□□□□ 0.52
CLDN11-209ENST00000489485 ZBTB1Q9Y2K1 713 aa18.29■□□□□ 0.52
CLDN11-209ENST00000489485 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
CLDN11-209ENST00000489485 ANXA1P04083 346 aa18.28■□□□□ 0.52
CLDN11-209ENST00000489485 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
CLDN11-209ENST00000489485 DBF4Q9UBU7 674 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-209ENST00000489485 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
CLDN11-209ENST00000489485 NUP188Q5SRE5 1749 aa18.27■□□□□ 0.52
CLDN11-209ENST00000489485 GNPATO15228 680 aa18.27■□□□□ 0.52
CLDN11-209ENST00000489485 ZNF428Q96B54 188 aa18.27■□□□□ 0.52
CLDN11-209ENST00000489485 BCL2L13Q9BXK5 485 aa18.27■□□□□ 0.52
CLDN11-209ENST00000489485 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
CLDN11-209ENST00000489485 NPM2Q86SE8 214 aaKnown RBP18.26■□□□□ 0.51
CLDN11-209ENST00000489485 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
CLDN11-209ENST00000489485 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
CLDN11-209ENST00000489485 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
CLDN11-209ENST00000489485 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
CLDN11-209ENST00000489485 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
CLDN11-209ENST00000489485 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
CLDN11-209ENST00000489485 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLDN11-209ENST00000489485 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
CLDN11-209ENST00000489485 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
CLDN11-209ENST00000489485 PDIA6Q15084 440 aa18.25■□□□□ 0.51
CLDN11-209ENST00000489485 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
CLDN11-209ENST00000489485 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
CLDN11-209ENST00000489485 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
CLDN11-209ENST00000489485 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
CLDN11-209ENST00000489485 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
CLDN11-209ENST00000489485 ARXQ96QS3 562 aa18.24■□□□□ 0.51
CLDN11-209ENST00000489485 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
CLDN11-209ENST00000489485 BCAR3O75815 825 aa18.24■□□□□ 0.51
CLDN11-209ENST00000489485 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
CLDN11-209ENST00000489485 ALDH1L2Q3SY69 923 aa18.24■□□□□ 0.51
CLDN11-209ENST00000489485 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 PHF14O94880 888 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-209ENST00000489485 SMIM5Q71RC9 77 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-209ENST00000489485 HYPKQ9NX55 129 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 UBR3Q6ZT12 1888 aa18.23■□□□□ 0.51
CLDN11-209ENST00000489485 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
CLDN11-209ENST00000489485 PHAXQ9H814 394 aaKnown RBP18.22■□□□□ 0.51
CLDN11-209ENST00000489485 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
CLDN11-209ENST00000489485 EIF5P55010 431 aaKnown RBP18.21■□□□□ 0.51
CLDN11-209ENST00000489485 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
CLDN11-209ENST00000489485 COL15A1P39059 1388 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
CLDN11-209ENST00000489485 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 G2E3Q7L622 706 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
CLDN11-209ENST00000489485 SOCS7O14512 581 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 TUBGCP6Q96RT7 1819 aa18.2■□□□□ 0.5
CLDN11-209ENST00000489485 SSFA2P28290 1259 aa18.19■□□□□ 0.5
CLDN11-209ENST00000489485 TBC1D2BQ9UPU7 963 aa18.19■□□□□ 0.5
CLDN11-209ENST00000489485 MSH5O43196 834 aa18.18■□□□□ 0.5
CLDN11-209ENST00000489485 FLIIQ13045 1269 aa18.18■□□□□ 0.5
CLDN11-209ENST00000489485 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
CLDN11-209ENST00000489485 PLIN1O60240 522 aa18.18■□□□□ 0.5
CLDN11-209ENST00000489485 RFC4P35249 363 aa18.18■□□□□ 0.5
CLDN11-209ENST00000489485 FKBP5Q13451 457 aaPredicted RBP18.18■□□□□ 0.5
CLDN11-209ENST00000489485 TTLL7Q6ZT98 887 aa18.18■□□□□ 0.5
CLDN11-209ENST00000489485 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
CLDN11-209ENST00000489485 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
CLDN11-209ENST00000489485 A0A087WZG4 1122 aa18.17■□□□□ 0.5
CLDN11-209ENST00000489485 ADRA2BP18089 450 aa18.17■□□□□ 0.5
CLDN11-209ENST00000489485 KIF6Q6ZMV9 814 aa18.17■□□□□ 0.5
CLDN11-209ENST00000489485 FLAD1Q8NFF5 587 aa18.16■□□□□ 0.5
CLDN11-209ENST00000489485 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
CLDN11-209ENST00000489485 PNPLA7Q6ZV29 1317 aa18.16■□□□□ 0.5
CLDN11-209ENST00000489485 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
CLDN11-209ENST00000489485 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
CLDN11-209ENST00000489485 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms