RNA–Protein interactions for RNA: ENST00000489295.5

LRRFIP1-213, Transcript of LRR binding FLII interacting protein 1, human

TSL 5

Gene LRRFIP1, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-213	ENST00000489295	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.91	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	LOC102724428	A0A0B4J2F2	783 aa		13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	TRIM37	O94972	964 aa		13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	MS4A1	P11836	297 aa		13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	HMGB2	P26583	209 aa	Known RBP	13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	ANP32A	P39687	249 aa	Known RBP	13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	SIK1	P57059	783 aa		13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	EXOC6	Q8TAG9	804 aa		13.9	□□□□□ -0.18
LRRFIP1-213	ENST00000489295	PTCD1	O75127	700 aa	Known RBP	13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	RARS	P54136	660 aa	Known RBP	13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	HDGFL1	Q5TGJ6	251 aa		13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	CCDC30	Q5VVM6	783 aa		13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	PTF1A	Q7RTS3	328 aa		13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	RBM42	Q9BTD8	480 aa	Known RBP	13.89	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	RREB1	Q92766	1687 aa		13.88	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	COL5A3	P25940	1745 aa	Predicted RBP	13.88	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	ELL2	O00472	640 aa	Predicted RBP	13.88	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	BRPF1	P55201	1214 aa	Predicted RBP	13.88	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	STK31	Q9BXU1	1019 aa		13.88	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	KIF16B	Q96L93	1317 aa		13.88	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	CACNA1F	O60840	1977 aa		13.87	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	STARD3NL	O95772	234 aa		13.87	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	SLC27A3	Q5K4L6	730 aa		13.87	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	SMC4	Q9NTJ3	1288 aa		13.87	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	PLSCR1	O15162	318 aa		13.86	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	SSH1	Q8WYL5	1049 aa		13.86	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	SLC4A9	Q96Q91	983 aa		13.86	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	PRAMEF22	A3QJZ6	481 aa		13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	SLC4A2	P04920	1241 aa		13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	ATP6V1A	P38606	617 aa		13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	CCDC125	Q86Z20	511 aa		13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	DNAJC10	Q8IXB1	793 aa		13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	DBF4	Q9UBU7	674 aa	Predicted RBP	13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	CCNL1	Q9UK58	526 aa	Predicted RBP	13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	NOP58	Q9Y2X3	529 aa	Known RBP	13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	CNTNAP4	Q9C0A0	1308 aa		13.85	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	APBA3	O96018	575 aa		13.84	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	CYP19A1	P11511	503 aa	Predicted RBP	13.84	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	EIF2S2	P20042	333 aa	Known RBP	13.84	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	USP16	Q9Y5T5	823 aa		13.84	□□□□□ -0.19
LRRFIP1-213	ENST00000489295	TAF1L	Q8IZX4	1826 aa		13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	EP400	Q96L91	3159 aa		13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	SF3B2	Q13435	895 aa	Known RBP	13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	ITPK1	Q13572	414 aa		13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	MRPL50	Q8N5N7	158 aa	Known RBP	13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	HYPK	Q9NX55	129 aa		13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CHPF2	Q9P2E5	772 aa		13.83	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	C4B	P0C0L5	1744 aa		13.82	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	BAG6	P46379	1132 aa		13.82	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	BCL2L13	Q9BXK5	485 aa		13.82	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CCDC87	Q9NVE4	849 aa		13.82	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	PTPRC	P08575	1304 aa		13.82	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	IPO8	O15397	1037 aa	Known RBP	13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	BCAR3	O75815	825 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CRKL	P46109	303 aa	Known RBP	13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	PDIA6	Q15084	440 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	TXNRD1	Q16881	649 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	RC3H1	Q5TC82	1133 aa	Known RBP	13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	LINC00116	Q8NCU8	138 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	ARHGAP45	Q92619	1136 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	NECTIN2	Q92692	538 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	IPO9	Q96P70	1041 aa	Known RBP	13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CRBN	Q96SW2	442 aa		13.81	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	PXDNL	A1KZ92	1463 aa		13.8	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	NBPF26	B4DH59	902 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	A1BG	P04217	495 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CANX	P27824	592 aa	Known RBP	13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	IL6ST	P40189	918 aa	Predicted RBP	13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	FLII	Q13045	1269 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	NBPF14	Q5TI25	921 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	ZKSCAN2	Q63HK3	967 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	NBPF10	Q6P3W6	841 aa	Known RBP	13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	LRP10	Q7Z4F1	713 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	NBPF15	Q8N660	670 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	API5	Q9BZZ5	524 aa	Known RBP	13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	ZBTB1	Q9Y2K1	713 aa		13.79	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	PROSER3	Q2NL68	480 aa		13.78	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	INTS5	Q6P9B9	1019 aa	Known RBP	13.78	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	ATF7IP	Q6VMQ6	1270 aa		13.78	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	CAMKK2	Q96RR4	588 aa		13.78	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	LRRC4B	Q9NT99	713 aa		13.78	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.78	□□□□□ -0.2
LRRFIP1-213	ENST00000489295	DDX58	O95786	925 aa	Known RBP	13.77	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	NUP188	Q5SRE5	1749 aa		13.77	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	MYH14	Q7Z406	1995 aa	Known RBP	13.77	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	PROM2	Q8N271	834 aa		13.77	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	AK7	Q96M32	723 aa		13.77	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	NOB1	Q9ULX3	412 aa	Known RBP	13.77	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	COL15A1	P39059	1388 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	ABCC4	O15439	1325 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	KDM2B	Q8NHM5	1336 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295		A0A087WZG4	1122 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	RGL2	O15211	777 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	RPS6KA4	O75676	772 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	ANXA1	P04083	346 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	MYL6B	P14649	208 aa		13.76	□□□□□ -0.21
LRRFIP1-213	ENST00000489295	EIF5	P55010	431 aa	Known RBP	13.76	□□□□□ -0.21

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