RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 IPO8O15397 1037 aaKnown RBP23.29■■□□□ 1.32
C9orf16-203ENST00000489240 STARD3NLO95772 234 aa23.29■■□□□ 1.32
C9orf16-203ENST00000489240 SLC4A2P04920 1241 aa23.29■■□□□ 1.32
C9orf16-203ENST00000489240 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
C9orf16-203ENST00000489240 ATP6V1AP38606 617 aa23.29■■□□□ 1.32
C9orf16-203ENST00000489240 RGPD3A6NKT7 1758 aaPredicted RBP23.29■■□□□ 1.32
C9orf16-203ENST00000489240 RGPD4Q7Z3J3 1758 aa23.29■■□□□ 1.32
C9orf16-203ENST00000489240 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
C9orf16-203ENST00000489240 DNAJC10Q8IXB1 793 aa23.28■■□□□ 1.32
C9orf16-203ENST00000489240 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
C9orf16-203ENST00000489240 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
C9orf16-203ENST00000489240 CHPF2Q9P2E5 772 aa23.28■■□□□ 1.32
C9orf16-203ENST00000489240 DDX21Q9NR30 783 aaKnown RBP eCLIP23.27■■□□□ 1.32
C9orf16-203ENST00000489240 ZKSCAN2Q63HK3 967 aa23.26■■□□□ 1.31
C9orf16-203ENST00000489240 HYPKQ9NX55 129 aa23.26■■□□□ 1.31
C9orf16-203ENST00000489240 NOB1Q9ULX3 412 aaKnown RBP23.26■■□□□ 1.31
C9orf16-203ENST00000489240 RREB1Q92766 1687 aa23.25■■□□□ 1.31
C9orf16-203ENST00000489240 ARHGAP45Q92619 1136 aa23.25■■□□□ 1.31
C9orf16-203ENST00000489240 PLIN1O60240 522 aa23.24■■□□□ 1.31
C9orf16-203ENST00000489240 CYP19A1P11511 503 aaPredicted RBP23.24■■□□□ 1.31
C9orf16-203ENST00000489240 MS4A1P11836 297 aa23.24■■□□□ 1.31
C9orf16-203ENST00000489240 PTPRCP08575 1304 aa23.24■■□□□ 1.31
C9orf16-203ENST00000489240 NEFLP07196 543 aa23.23■■□□□ 1.31
C9orf16-203ENST00000489240 CCNL1Q9UK58 526 aaPredicted RBP23.23■■□□□ 1.31
C9orf16-203ENST00000489240 APBA3O96018 575 aa23.22■■□□□ 1.31
C9orf16-203ENST00000489240 HMGB2P26583 209 aaKnown RBP23.22■■□□□ 1.31
C9orf16-203ENST00000489240 ITPK1Q13572 414 aa23.22■■□□□ 1.31
C9orf16-203ENST00000489240 PDIA6Q15084 440 aa23.22■■□□□ 1.31
C9orf16-203ENST00000489240 MYH14Q7Z406 1995 aaKnown RBP23.21■■□□□ 1.31
C9orf16-203ENST00000489240 PLSCR1O15162 318 aa23.21■■□□□ 1.31
C9orf16-203ENST00000489240 A1BGP04217 495 aa23.21■■□□□ 1.31
C9orf16-203ENST00000489240 FLIIQ13045 1269 aa23.21■■□□□ 1.31
C9orf16-203ENST00000489240 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
C9orf16-203ENST00000489240 G2E3Q7L622 706 aa23.21■■□□□ 1.31
C9orf16-203ENST00000489240 API5Q9BZZ5 524 aaKnown RBP23.21■■□□□ 1.31
C9orf16-203ENST00000489240 MYL6BP14649 208 aa23.2■■□□□ 1.3
C9orf16-203ENST00000489240 PDE3AQ14432 1141 aa23.2■■□□□ 1.3
C9orf16-203ENST00000489240 SLC27A3Q5K4L6 730 aa23.2■■□□□ 1.3
C9orf16-203ENST00000489240 ANXA1P04083 346 aa23.19■■□□□ 1.3
C9orf16-203ENST00000489240 PROSER3Q2NL68 480 aa23.19■■□□□ 1.3
C9orf16-203ENST00000489240 PHAXQ9H814 394 aaKnown RBP23.19■■□□□ 1.3
C9orf16-203ENST00000489240 CCDC87Q9NVE4 849 aa23.19■■□□□ 1.3
C9orf16-203ENST00000489240 N4BP2Q86UW6 1770 aaPredicted RBP23.19■■□□□ 1.3
C9orf16-203ENST00000489240 C4BP0C0L5 1744 aa23.19■■□□□ 1.3
C9orf16-203ENST00000489240 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
C9orf16-203ENST00000489240 TRIM27P14373 513 aa23.18■■□□□ 1.3
C9orf16-203ENST00000489240 CRKLP46109 303 aaKnown RBP23.18■■□□□ 1.3
C9orf16-203ENST00000489240 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
C9orf16-203ENST00000489240 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
C9orf16-203ENST00000489240 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
C9orf16-203ENST00000489240 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
C9orf16-203ENST00000489240 FTSJ3Q8IY81 847 aaKnown RBP23.17■■□□□ 1.3
C9orf16-203ENST00000489240 DZIP1LQ8IYY4 767 aaKnown RBP23.17■■□□□ 1.3
C9orf16-203ENST00000489240 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
C9orf16-203ENST00000489240 CNTNAP4Q9C0A0 1308 aa23.16■■□□□ 1.3
C9orf16-203ENST00000489240 DDX58O95786 925 aaKnown RBP23.16■■□□□ 1.3
C9orf16-203ENST00000489240 PIP4K2AP48426 406 aaPredicted RBP23.16■■□□□ 1.3
C9orf16-203ENST00000489240 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
C9orf16-203ENST00000489240 RC3H1Q5TC82 1133 aaKnown RBP23.16■■□□□ 1.3
C9orf16-203ENST00000489240 LINC00116Q8NCU8 138 aa23.16■■□□□ 1.3
C9orf16-203ENST00000489240 INTS5Q6P9B9 1019 aaKnown RBP23.15■■□□□ 1.3
C9orf16-203ENST00000489240 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
C9orf16-203ENST00000489240 NUP188Q5SRE5 1749 aa23.14■■□□□ 1.3
C9orf16-203ENST00000489240 IL6STP40189 918 aaPredicted RBP23.14■■□□□ 1.29
C9orf16-203ENST00000489240 KCNQ4P56696 695 aa23.14■■□□□ 1.29
C9orf16-203ENST00000489240 AIMP1Q12904 312 aaKnown RBP23.14■■□□□ 1.29
C9orf16-203ENST00000489240 TXNRD1Q16881 649 aa23.14■■□□□ 1.29
C9orf16-203ENST00000489240 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
C9orf16-203ENST00000489240 NPM2Q86SE8 214 aaKnown RBP23.14■■□□□ 1.29
C9orf16-203ENST00000489240 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
C9orf16-203ENST00000489240 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
C9orf16-203ENST00000489240 ZBTB1Q9Y2K1 713 aa23.14■■□□□ 1.29
C9orf16-203ENST00000489240 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
C9orf16-203ENST00000489240 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
C9orf16-203ENST00000489240 ABCC4O15439 1325 aa23.12■■□□□ 1.29
C9orf16-203ENST00000489240 IRX6P78412 446 aaPredicted RBP23.12■■□□□ 1.29
C9orf16-203ENST00000489240 LRRC4BQ9NT99 713 aa23.12■■□□□ 1.29
C9orf16-203ENST00000489240 TNNQ9UQP3 1299 aa23.12■■□□□ 1.29
C9orf16-203ENST00000489240 PXDNLA1KZ92 1463 aa23.11■■□□□ 1.29
C9orf16-203ENST00000489240 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
C9orf16-203ENST00000489240 PANK1Q8TE04 598 aa23.11■■□□□ 1.29
C9orf16-203ENST00000489240 ZNF330Q9Y3S2 320 aaPredicted RBP23.11■■□□□ 1.29
C9orf16-203ENST00000489240 UBR3Q6ZT12 1888 aa23.11■■□□□ 1.29
C9orf16-203ENST00000489240 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
C9orf16-203ENST00000489240 PI4KAP2A4QPH2 592 aa23.1■■□□□ 1.29
C9orf16-203ENST00000489240 BAG6P46379 1132 aa23.1■■□□□ 1.29
C9orf16-203ENST00000489240 ANKRD13DQ6ZTN6 518 aa23.1■■□□□ 1.29
C9orf16-203ENST00000489240 PROM2Q8N271 834 aa23.1■■□□□ 1.29
C9orf16-203ENST00000489240 PI4KAP1Q8N8J0 262 aa23.1■■□□□ 1.29
C9orf16-203ENST00000489240 NUP98P52948 1817 aa23.1■■□□□ 1.29
C9orf16-203ENST00000489240 EP400Q96L91 3159 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 RLBP1P12271 317 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 EIF5P55010 431 aaKnown RBP23.09■■□□□ 1.29
C9orf16-203ENST00000489240 KIF6Q6ZMV9 814 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 RIC3Q7Z5B4 369 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 PLBD2Q8NHP8 589 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 ADCY9O60503 1353 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
C9orf16-203ENST00000489240 A0A087WZG4 1122 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms