RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 C4AP0C0L4 1744 aa31.65■■■□□ 2.66
PTPN18-213ENST00000489215 USP42Q9H9J4 1324 aaKnown RBP31.65■■■□□ 2.66
PTPN18-213ENST00000489215 A0A087WZG4 1122 aa31.63■■■□□ 2.65
PTPN18-213ENST00000489215 NPM2Q86SE8 214 aaKnown RBP31.63■■■□□ 2.65
PTPN18-213ENST00000489215 ZBTB1Q9Y2K1 713 aa31.63■■■□□ 2.65
PTPN18-213ENST00000489215 SNRPA1P09661 255 aaKnown RBP31.62■■■□□ 2.65
PTPN18-213ENST00000489215 RIPK4P57078 832 aa31.62■■■□□ 2.65
PTPN18-213ENST00000489215 PARP3Q9Y6F1 533 aa31.62■■■□□ 2.65
PTPN18-213ENST00000489215 COL15A1P39059 1388 aa31.61■■■□□ 2.65
PTPN18-213ENST00000489215 GPR162Q16538 588 aa31.61■■■□□ 2.65
PTPN18-213ENST00000489215 RUNDC1Q96C34 613 aa31.61■■■□□ 2.65
PTPN18-213ENST00000489215 KCNQ3O43525 872 aa31.6■■■□□ 2.65
PTPN18-213ENST00000489215 CANXP27824 592 aaKnown RBP31.6■■■□□ 2.65
PTPN18-213ENST00000489215 NARFQ9UHQ1 456 aa31.6■■■□□ 2.65
PTPN18-213ENST00000489215 TMPOP42166 694 aaKnown RBP31.59■■■□□ 2.65
PTPN18-213ENST00000489215 NLGN2Q8NFZ4 835 aa31.59■■■□□ 2.65
PTPN18-213ENST00000489215 IL6STP40189 918 aaPredicted RBP31.58■■■□□ 2.65
PTPN18-213ENST00000489215 EIF5P55010 431 aaKnown RBP31.58■■■□□ 2.65
PTPN18-213ENST00000489215 ADAMTS8Q9UP79 889 aa31.58■■■□□ 2.65
PTPN18-213ENST00000489215 SRP68Q9UHB9 627 aaKnown RBP31.57■■■□□ 2.64
PTPN18-213ENST00000489215 USPL1Q5W0Q7 1092 aa31.55■■■□□ 2.64
PTPN18-213ENST00000489215 BABAM1Q9NWV8 329 aa31.55■■■□□ 2.64
PTPN18-213ENST00000489215 FKBP8Q14318 412 aa31.54■■■□□ 2.64
PTPN18-213ENST00000489215 ANP32CO43423 234 aa31.53■■■□□ 2.64
PTPN18-213ENST00000489215 GRIN3BO60391 1043 aa31.53■■■□□ 2.64
PTPN18-213ENST00000489215 USP16Q9Y5T5 823 aa31.53■■■□□ 2.64
PTPN18-213ENST00000489215 TGFB2P61812 414 aa31.52■■■□□ 2.64
PTPN18-213ENST00000489215 CCDC146Q8IYE0 955 aa31.52■■■□□ 2.64
PTPN18-213ENST00000489215 PELP1Q8IZL8 1130 aaKnown RBP31.52■■■□□ 2.64
PTPN18-213ENST00000489215 A1BGP04217 495 aa31.51■■■□□ 2.63
PTPN18-213ENST00000489215 TM4SF1P30408 202 aa31.51■■■□□ 2.63
PTPN18-213ENST00000489215 MIS18AQ9NYP9 233 aa31.51■■■□□ 2.63
PTPN18-213ENST00000489215 KDM3BQ7LBC6 1761 aa31.51■■■□□ 2.63
PTPN18-213ENST00000489215 YY1P25490 414 aa31.5■■■□□ 2.63
PTPN18-213ENST00000489215 THUMPD2Q9BTF0 503 aaKnown RBP31.5■■■□□ 2.63
PTPN18-213ENST00000489215 KIF13BQ9NQT8 1826 aa31.49■■■□□ 2.63
PTPN18-213ENST00000489215 NEUROD2Q15784 382 aa31.48■■■□□ 2.63
PTPN18-213ENST00000489215 ZNF330Q9Y3S2 320 aaPredicted RBP31.48■■■□□ 2.63
PTPN18-213ENST00000489215 EIF4A1P60842 406 aaKnown RBP31.47■■■□□ 2.63
PTPN18-213ENST00000489215 TSPYL4Q9UJ04 414 aa31.47■■■□□ 2.63
PTPN18-213ENST00000489215 CHD4Q14839 1912 aa31.47■■■□□ 2.63
PTPN18-213ENST00000489215 GIGYF1O75420 1035 aaPredicted RBP31.45■■■□□ 2.63
PTPN18-213ENST00000489215 C10orf71Q711Q0 1435 aa31.45■■■□□ 2.63
PTPN18-213ENST00000489215 POLRMTO00411 1230 aaKnown RBP31.44■■■□□ 2.62
PTPN18-213ENST00000489215 RRP7AQ9Y3A4 280 aaKnown RBP31.44■■■□□ 2.62
PTPN18-213ENST00000489215 PRAMEF22A3QJZ6 481 aa31.43■■■□□ 2.62
PTPN18-213ENST00000489215 DDR1Q08345 913 aa31.43■■■□□ 2.62
PTPN18-213ENST00000489215 NFIXQ14938 502 aa31.43■■■□□ 2.62
PTPN18-213ENST00000489215 TBC1D2BQ9UPU7 963 aa31.43■■■□□ 2.62
PTPN18-213ENST00000489215 DZIP3Q86Y13 1208 aaKnown RBP31.42■■■□□ 2.62
PTPN18-213ENST00000489215 BCL2L12Q9HB09 334 aa31.42■■■□□ 2.62
PTPN18-213ENST00000489215 LAMB4A4D0S4 1761 aa31.42■■■□□ 2.62
PTPN18-213ENST00000489215 RGL2O15211 777 aa31.41■■■□□ 2.62
PTPN18-213ENST00000489215 TRIM35Q9UPQ4 493 aa31.4■■■□□ 2.62
PTPN18-213ENST00000489215 YBX3P16989 372 aaKnown RBP eCLIP31.39■■■□□ 2.62
PTPN18-213ENST00000489215 CLEC4GQ6UXB4 293 aa31.39■■■□□ 2.62
PTPN18-213ENST00000489215 ZNF652Q9Y2D9 606 aa31.39■■■□□ 2.62
PTPN18-213ENST00000489215 SERPINB2P05120 415 aa31.38■■■□□ 2.61
PTPN18-213ENST00000489215 CALD1Q05682 793 aaKnown RBP31.38■■■□□ 2.61
PTPN18-213ENST00000489215 ERBB4Q15303 1308 aa31.37■■■□□ 2.61
PTPN18-213ENST00000489215 PXDNLA1KZ92 1463 aa31.37■■■□□ 2.61
PTPN18-213ENST00000489215 SCN7AQ01118 1682 aa31.37■■■□□ 2.61
PTPN18-213ENST00000489215 CAMTA2O94983 1202 aa31.36■■■□□ 2.61
PTPN18-213ENST00000489215 A0A0G2JLW4 131 aa31.35■■■□□ 2.61
PTPN18-213ENST00000489215 NBPF26B4DH59 902 aa31.35■■■□□ 2.61
PTPN18-213ENST00000489215 CHL1O00533 1208 aa31.35■■■□□ 2.61
PTPN18-213ENST00000489215 APAF1O14727 1248 aa31.35■■■□□ 2.61
PTPN18-213ENST00000489215 NBPF10Q6P3W6 841 aaKnown RBP31.35■■■□□ 2.61
PTPN18-213ENST00000489215 NBPF15Q8N660 670 aa31.35■■■□□ 2.61
PTPN18-213ENST00000489215 SETDB2Q96T68 719 aa31.35■■■□□ 2.61
PTPN18-213ENST00000489215 BICDL1Q6ZP65 573 aa31.34■■■□□ 2.61
PTPN18-213ENST00000489215 MRS2Q9HD23 443 aa31.34■■■□□ 2.61
PTPN18-213ENST00000489215 AFDNP55196 1824 aaKnown RBP31.33■■■□□ 2.61
PTPN18-213ENST00000489215 N4BP2Q86UW6 1770 aaPredicted RBP31.33■■■□□ 2.61
PTPN18-213ENST00000489215 CARMIL3Q8ND23 1372 aa31.33■■■□□ 2.61
PTPN18-213ENST00000489215 NRXN2Q9P2S2 1712 aa31.33■■■□□ 2.61
PTPN18-213ENST00000489215 DPEP1P16444 411 aa31.33■■■□□ 2.61
PTPN18-213ENST00000489215 PIP4K2AP48426 406 aaPredicted RBP31.33■■■□□ 2.61
PTPN18-213ENST00000489215 TBC1D9BQ66K14 1250 aa31.33■■■□□ 2.61
PTPN18-213ENST00000489215 CFAP44Q96MT7 982 aa31.32■■■□□ 2.6
PTPN18-213ENST00000489215 PIM2Q9P1W9 311 aa31.32■■■□□ 2.6
PTPN18-213ENST00000489215 KIAA1551Q9HCM1 1747 aa31.32■■■□□ 2.6
PTPN18-213ENST00000489215 BCORQ6W2J9 1755 aa31.31■■■□□ 2.6
PTPN18-213ENST00000489215 PDZRN3Q9UPQ7 1066 aa31.31■■■□□ 2.6
PTPN18-213ENST00000489215 LAS1LQ9Y4W2 734 aaKnown RBP31.31■■■□□ 2.6
PTPN18-213ENST00000489215 CCDC184Q52MB2 194 aa31.3■■■□□ 2.6
PTPN18-213ENST00000489215 BCS1LQ9Y276 419 aa31.28■■■□□ 2.6
PTPN18-213ENST00000489215 ERVV-1B6SEH8 477 aa31.27■■■□□ 2.6
PTPN18-213ENST00000489215 NPHP1O15259 732 aa31.27■■■□□ 2.6
PTPN18-213ENST00000489215 KIF6Q6ZMV9 814 aa31.27■■■□□ 2.6
PTPN18-213ENST00000489215 KCNA3P22001 575 aa31.26■■■□□ 2.59
PTPN18-213ENST00000489215 NCBP3Q53F19 620 aaKnown RBP31.26■■■□□ 2.59
PTPN18-213ENST00000489215 BRCA1P38398 1863 aaKnown RBP31.25■■■□□ 2.59
PTPN18-213ENST00000489215 UTRNP46939 3433 aa31.25■■■□□ 2.59
PTPN18-213ENST00000489215 HOXB7P09629 217 aa31.25■■■□□ 2.59
PTPN18-213ENST00000489215 EIF2S2P20042 333 aaKnown RBP31.25■■■□□ 2.59
PTPN18-213ENST00000489215 GNAI1P63096 354 aa31.25■■■□□ 2.59
PTPN18-213ENST00000489215 BRIP1Q9BX63 1249 aa31.25■■■□□ 2.59
PTPN18-213ENST00000489215 MYL6BP14649 208 aa31.24■■■□□ 2.59
PTPN18-213ENST00000489215 PDE6BP35913 854 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms