RNA–Protein interactions for RNA: ENST00000489113.2

GAPDHP47-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 47, humanhuman

BASIC

Gene GAPDHP47, Length 999 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP47-201ENST00000489113 ZBTB1Q9Y2K1 713 aa11.74□□□□□ -0.53
GAPDHP47-201ENST00000489113 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
GAPDHP47-201ENST00000489113 BTBD11A6QL63 1104 aa11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 PPP2R1AP30153 589 aa11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 DDR1Q08345 913 aa11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
GAPDHP47-201ENST00000489113 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
GAPDHP47-201ENST00000489113 TM4SF1P30408 202 aa11.72□□□□□ -0.53
GAPDHP47-201ENST00000489113 CHRNA5P30532 468 aa11.72□□□□□ -0.53
GAPDHP47-201ENST00000489113 NFIXQ14938 502 aa11.72□□□□□ -0.53
GAPDHP47-201ENST00000489113 PHACTR3Q96KR7 559 aa11.72□□□□□ -0.53
GAPDHP47-201ENST00000489113 ITGB4P16144 1822 aa11.72□□□□□ -0.53
GAPDHP47-201ENST00000489113 COL15A1P39059 1388 aa11.71□□□□□ -0.53
GAPDHP47-201ENST00000489113 SERPINB2P05120 415 aa11.71□□□□□ -0.53
GAPDHP47-201ENST00000489113 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.54
GAPDHP47-201ENST00000489113 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 UTRNP46939 3433 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 H0YIN7 160 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
GAPDHP47-201ENST00000489113 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
GAPDHP47-201ENST00000489113 KCNA3P22001 575 aa11.69□□□□□ -0.54
GAPDHP47-201ENST00000489113 MCM10Q7L590 875 aa11.69□□□□□ -0.54
GAPDHP47-201ENST00000489113 C2CD5Q86YS7 1000 aa11.69□□□□□ -0.54
GAPDHP47-201ENST00000489113 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
GAPDHP47-201ENST00000489113 A1BGP04217 495 aa11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 IL6STP40189 918 aaPredicted RBP11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 EIF5P55010 431 aaKnown RBP11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 SETDB2Q96T68 719 aa11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
GAPDHP47-201ENST00000489113 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 UBR3Q6ZT12 1888 aa11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 ADCY9O60503 1353 aa11.67□□□□□ -0.54
GAPDHP47-201ENST00000489113 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 KCNQ3O43525 872 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 HSPA6P17066 643 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 PDE6BP35913 854 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 ZNF652Q9Y2D9 606 aa11.66□□□□□ -0.54
GAPDHP47-201ENST00000489113 TOMM70O94826 608 aa11.65□□□□□ -0.54
GAPDHP47-201ENST00000489113 ST5P78524 1137 aa11.65□□□□□ -0.54
GAPDHP47-201ENST00000489113 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
GAPDHP47-201ENST00000489113 BRIP1Q9BX63 1249 aa11.65□□□□□ -0.54
GAPDHP47-201ENST00000489113 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
GAPDHP47-201ENST00000489113 MRC1P22897 1456 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 KIF3CO14782 793 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 NMRK2Q9NPI5 230 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 CHD4Q14839 1912 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 CEMIPQ8WUJ3 1361 aa11.64□□□□□ -0.55
GAPDHP47-201ENST00000489113 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 ZNF831Q5JPB2 1677 aa11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 LMNB1P20700 586 aa11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 NBPF5PQ86XG9 351 aaPredicted RBP11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 MIS18AQ9NYP9 233 aa11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 KCPQ6ZWJ8 1503 aa11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
GAPDHP47-201ENST00000489113 CAMTA2O94983 1202 aa11.62□□□□□ -0.55
GAPDHP47-201ENST00000489113 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
GAPDHP47-201ENST00000489113 RRAGCQ9HB90 399 aa11.62□□□□□ -0.55
GAPDHP47-201ENST00000489113 C4AP0C0L4 1744 aa11.62□□□□□ -0.55
GAPDHP47-201ENST00000489113 PRAMEF22A3QJZ6 481 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 C21orf2O43822 256 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 APLP1P51693 650 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 RASSF7Q02833 373 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
GAPDHP47-201ENST00000489113 RALBP1Q15311 655 aa11.6□□□□□ -0.55
GAPDHP47-201ENST00000489113 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
GAPDHP47-201ENST00000489113 NIP7Q9Y221 180 aaKnown RBP eCLIP11.6□□□□□ -0.55
GAPDHP47-201ENST00000489113 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms