RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
RFC4-213ENST00000489028 PARP3Q9Y6F1 533 aa7.62□□□□□ -1.19
RFC4-213ENST00000489028 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 ATP4AP20648 1035 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 SEC13P55735 322 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 RNFT1Q5M7Z0 435 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 SH3PXD2AQ5TCZ1 1133 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 SV2AQ7L0J3 742 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 CCDC97Q96F63 343 aaPredicted RBP7.61□□□□□ -1.19
RFC4-213ENST00000489028 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
RFC4-213ENST00000489028 C21orf2O43822 256 aa7.6□□□□□ -1.19
RFC4-213ENST00000489028 GAS2L2Q8NHY3 880 aa7.6□□□□□ -1.19
RFC4-213ENST00000489028 RUBCNLQ9H714 662 aa7.6□□□□□ -1.19
RFC4-213ENST00000489028 GPR25O00155 361 aa7.59□□□□□ -1.19
RFC4-213ENST00000489028 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
RFC4-213ENST00000489028 TXLNAP40222 546 aa7.59□□□□□ -1.19
RFC4-213ENST00000489028 UBAP2LQ14157 1087 aaKnown RBP7.59□□□□□ -1.19
RFC4-213ENST00000489028 GAS6Q14393 721 aa7.59□□□□□ -1.19
RFC4-213ENST00000489028 GTPBP3Q969Y2 492 aaKnown RBP7.59□□□□□ -1.19
RFC4-213ENST00000489028 COL25A1Q9BXS0 654 aaPredicted RBP7.59□□□□□ -1.19
RFC4-213ENST00000489028 SERPINA10Q9UK55 444 aa7.59□□□□□ -1.19
RFC4-213ENST00000489028 ZMIZ1Q9ULJ6 1067 aa7.59□□□□□ -1.19
RFC4-213ENST00000489028 TEAD4Q15561 434 aa7.58□□□□□ -1.2
RFC4-213ENST00000489028 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
RFC4-213ENST00000489028 KLRG1Q96E93 195 aa7.58□□□□□ -1.2
RFC4-213ENST00000489028 NUCKS1Q9H1E3 243 aaKnown RBP7.58□□□□□ -1.2
RFC4-213ENST00000489028 EML1O00423 815 aa7.57□□□□□ -1.2
RFC4-213ENST00000489028 STK32AQ8WU08 396 aa7.57□□□□□ -1.2
RFC4-213ENST00000489028 L3MBTL2Q969R5 705 aa7.57□□□□□ -1.2
RFC4-213ENST00000489028 CNTNAP3BQ96NU0 1288 aa7.57□□□□□ -1.2
RFC4-213ENST00000489028 CNTNAP3Q9BZ76 1288 aa7.57□□□□□ -1.2
RFC4-213ENST00000489028 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
RFC4-213ENST00000489028 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
RFC4-213ENST00000489028 H7C1W4 665 aa7.56□□□□□ -1.2
RFC4-213ENST00000489028 SUPT5HO00267 1087 aaKnown RBP7.56□□□□□ -1.2
RFC4-213ENST00000489028 NOS2P35228 1153 aa7.56□□□□□ -1.2
RFC4-213ENST00000489028 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
RFC4-213ENST00000489028 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
RFC4-213ENST00000489028 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
RFC4-213ENST00000489028 CRISPLD1Q9H336 500 aa7.56□□□□□ -1.2
RFC4-213ENST00000489028 SERTM1A2A2V5 107 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 PSMA6P60900 246 aaKnown RBP7.55□□□□□ -1.2
RFC4-213ENST00000489028 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 C7orf43Q8WVR3 580 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 PBXIP1Q96AQ6 731 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 ZDHHC3Q9NYG2 299 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 ZNF232Q9UNY5 417 aa7.55□□□□□ -1.2
RFC4-213ENST00000489028 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
RFC4-213ENST00000489028 ATG7O95352 703 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 CSB-PGBD3P0DP91 1061 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 FAM69CQ0P6D2 419 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
RFC4-213ENST00000489028 PGBD3Q8N328 593 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 ZIC5Q96T25 663 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 HCN2Q9UL51 889 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 ATAD2Q6PL18 1390 aa7.54□□□□□ -1.2
RFC4-213ENST00000489028 A0A1W2PNR3 127 aa7.53□□□□□ -1.2
RFC4-213ENST00000489028 HIRAP54198 1017 aaPredicted RBP7.53□□□□□ -1.2
RFC4-213ENST00000489028 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
RFC4-213ENST00000489028 NDFIP2Q9NV92 336 aa7.53□□□□□ -1.2
RFC4-213ENST00000489028 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
RFC4-213ENST00000489028 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
RFC4-213ENST00000489028 WEE1P30291 646 aa7.52□□□□□ -1.21
RFC4-213ENST00000489028 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.21
RFC4-213ENST00000489028 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.21
RFC4-213ENST00000489028 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
RFC4-213ENST00000489028 CHMP7Q8WUX9 453 aaPredicted RBP7.52□□□□□ -1.21
RFC4-213ENST00000489028 BNIP3LO60238 219 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 IGFBP4P22692 258 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 EFHC2Q5JST6 749 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 ERICH6Q7L0X2 663 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 STAG2Q8N3U4 1231 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 ABHD17AQ96GS6 310 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 ZCCHC2Q9C0B9 1178 aaKnown RBP7.51□□□□□ -1.21
RFC4-213ENST00000489028 PHACTR1Q9C0D0 580 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 SLAIN2Q9P270 581 aa7.51□□□□□ -1.21
RFC4-213ENST00000489028 ACIN1Q9UKV3 1341 aaKnown RBP7.51□□□□□ -1.21
RFC4-213ENST00000489028 INSM1Q01101 510 aaPredicted RBP7.5□□□□□ -1.21
RFC4-213ENST00000489028 NLRP8Q86W28 1048 aa7.5□□□□□ -1.21
RFC4-213ENST00000489028 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
RFC4-213ENST00000489028 PRIMPOLQ96LW4 560 aa7.5□□□□□ -1.21
RFC4-213ENST00000489028 TRERF1Q96PN7 1200 aa7.5□□□□□ -1.21
RFC4-213ENST00000489028 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
RFC4-213ENST00000489028 SLURP2P0DP57 97 aa7.49□□□□□ -1.21
RFC4-213ENST00000489028 FOXR1Q6PIV2 292 aa7.49□□□□□ -1.21
RFC4-213ENST00000489028 BICDL1Q6ZP65 573 aa7.49□□□□□ -1.21
RFC4-213ENST00000489028 ZSCAN1Q8NBB4 408 aa7.49□□□□□ -1.21
RFC4-213ENST00000489028 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
RFC4-213ENST00000489028 PRMT3O60678 531 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 OCLNQ16625 522 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 SWI5Q1ZZU3 235 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 C1orf53Q5VUE5 145 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 LRRC69Q6ZNQ3 347 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 ALDH16A1Q8IZ83 802 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 RHPN1Q8TCX5 695 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 NGLY1Q96IV0 654 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms