RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DZIP3Q86Y13 1208 aaKnown RBP5.95□□□□□ -1.46
PRPF4-203ENST00000488937 PGBD3Q8N328 593 aa5.95□□□□□ -1.46
PRPF4-203ENST00000488937 ADAM32Q8TC27 787 aa5.95□□□□□ -1.46
PRPF4-203ENST00000488937 SSBP4Q9BWG4 385 aaPredicted RBP5.95□□□□□ -1.46
PRPF4-203ENST00000488937 SSTR4P31391 388 aa5.94□□□□□ -1.46
PRPF4-203ENST00000488937 RAB15P59190 212 aa5.94□□□□□ -1.46
PRPF4-203ENST00000488937 SLC51AQ86UW1 340 aa5.94□□□□□ -1.46
PRPF4-203ENST00000488937 CYLDQ9NQC7 956 aa5.94□□□□□ -1.46
PRPF4-203ENST00000488937 NRG1Q02297 640 aaPredicted RBP5.93□□□□□ -1.46
PRPF4-203ENST00000488937 COL9A3Q14050 684 aaPredicted RBP5.93□□□□□ -1.46
PRPF4-203ENST00000488937 OGFOD2Q6N063 350 aa5.93□□□□□ -1.46
PRPF4-203ENST00000488937 ZMYND15Q9H091 742 aa5.93□□□□□ -1.46
PRPF4-203ENST00000488937 ESPNB1AK53 854 aa5.92□□□□□ -1.46
PRPF4-203ENST00000488937 CTDSPL2Q05D32 466 aa5.92□□□□□ -1.46
PRPF4-203ENST00000488937 CLN3Q13286 438 aa5.92□□□□□ -1.46
PRPF4-203ENST00000488937 PRDM6Q9NQX0 595 aa5.92□□□□□ -1.46
PRPF4-203ENST00000488937 SELPP16109 830 aa5.91□□□□□ -1.46
PRPF4-203ENST00000488937 FAM182BQ5T319 152 aa5.91□□□□□ -1.46
PRPF4-203ENST00000488937 LENG1Q96BZ8 264 aaPredicted RBP5.91□□□□□ -1.46
PRPF4-203ENST00000488937 RUBCNLQ9H714 662 aa5.91□□□□□ -1.46
PRPF4-203ENST00000488937 POU5F2Q8N7G0 328 aa5.9□□□□□ -1.46
PRPF4-203ENST00000488937 ELOA3CA0A087WX78 387 aaPredicted RBP5.89□□□□□ -1.47
PRPF4-203ENST00000488937 ELOA3DA6NLF2 546 aaPredicted RBP5.89□□□□□ -1.47
PRPF4-203ENST00000488937 NR6A1Q15406 480 aa5.89□□□□□ -1.47
PRPF4-203ENST00000488937 ELOA3BQ3SY89 546 aa5.89□□□□□ -1.47
PRPF4-203ENST00000488937 ELOA3Q8NG57 546 aa5.89□□□□□ -1.47
PRPF4-203ENST00000488937 KDM4CQ9H3R0 1056 aa5.89□□□□□ -1.47
PRPF4-203ENST00000488937 GPBP1L1Q9HC44 474 aaPredicted RBP5.89□□□□□ -1.47
PRPF4-203ENST00000488937 KIAA1324LA8MWY0 1029 aaPredicted RBP5.88□□□□□ -1.47
PRPF4-203ENST00000488937 ALAS2P22557 587 aa5.88□□□□□ -1.47
PRPF4-203ENST00000488937 ZNF468Q5VIY5 522 aaPredicted RBP5.88□□□□□ -1.47
PRPF4-203ENST00000488937 FIGNL1Q6PIW4 674 aa5.88□□□□□ -1.47
PRPF4-203ENST00000488937 CYP2U1Q7Z449 544 aa5.88□□□□□ -1.47
PRPF4-203ENST00000488937 LRRN4Q8WUT4 740 aa5.88□□□□□ -1.47
PRPF4-203ENST00000488937 OCSTAMPQ9BR26 566 aa5.88□□□□□ -1.47
PRPF4-203ENST00000488937 CRISPLD1Q9H336 500 aa5.87□□□□□ -1.47
PRPF4-203ENST00000488937 C1orf115Q9H7X2 142 aa5.87□□□□□ -1.47
PRPF4-203ENST00000488937 PCDHGC4Q9Y5F7 938 aa5.87□□□□□ -1.47
PRPF4-203ENST00000488937 PCBP4P57723 403 aaKnown RBP5.86□□□□□ -1.47
PRPF4-203ENST00000488937 RNF20Q5VTR2 975 aa5.86□□□□□ -1.47
PRPF4-203ENST00000488937 CC2D2BQ6DHV5 1058 aa5.86□□□□□ -1.47
PRPF4-203ENST00000488937 SPOCD1Q6ZMY3 1216 aa5.86□□□□□ -1.47
PRPF4-203ENST00000488937 ZNF592Q92610 1267 aa5.86□□□□□ -1.47
PRPF4-203ENST00000488937 ESF1Q9H501 851 aaKnown RBP5.86□□□□□ -1.47
PRPF4-203ENST00000488937 M0R082 166 aa5.85□□□□□ -1.47
PRPF4-203ENST00000488937 MSX1P28360 303 aa5.85□□□□□ -1.47
PRPF4-203ENST00000488937 GTF2E1P29083 439 aaPredicted RBP5.85□□□□□ -1.47
PRPF4-203ENST00000488937 ZNF417Q8TAU3 575 aa5.85□□□□□ -1.47
PRPF4-203ENST00000488937 ZNF587Q96SQ5 575 aaPredicted RBP5.85□□□□□ -1.47
PRPF4-203ENST00000488937 MDFIQ99750 246 aa5.85□□□□□ -1.47
PRPF4-203ENST00000488937 FAM117AQ9C073 453 aa5.85□□□□□ -1.47
PRPF4-203ENST00000488937 NID1P14543 1247 aa5.84□□□□□ -1.47
PRPF4-203ENST00000488937 PHKA2P46019 1235 aa5.84□□□□□ -1.47
PRPF4-203ENST00000488937 ERVK-9P63128 1117 aa5.84□□□□□ -1.47
PRPF4-203ENST00000488937 DDRGK1Q96HY6 314 aa5.84□□□□□ -1.47
PRPF4-203ENST00000488937 POLR3EQ9NVU0 708 aa5.84□□□□□ -1.47
PRPF4-203ENST00000488937 MED26O95402 600 aa5.83□□□□□ -1.48
PRPF4-203ENST00000488937 ZCCHC2Q9C0B9 1178 aaKnown RBP5.83□□□□□ -1.48
PRPF4-203ENST00000488937 DNAAF2Q9NVR5 837 aaKnown RBP5.83□□□□□ -1.48
PRPF4-203ENST00000488937 MCCD1P59942 119 aaPredicted RBP5.82□□□□□ -1.48
PRPF4-203ENST00000488937 PRR23CQ6ZRP0 262 aa5.82□□□□□ -1.48
PRPF4-203ENST00000488937 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
PRPF4-203ENST00000488937 HCN2Q9UL51 889 aa5.82□□□□□ -1.48
PRPF4-203ENST00000488937 PRR12Q9ULL5 1215 aa5.82□□□□□ -1.48
PRPF4-203ENST00000488937 CCDC9Q9Y3X0 531 aaKnown RBP5.82□□□□□ -1.48
PRPF4-203ENST00000488937 CD33P20138 364 aa5.81□□□□□ -1.48
PRPF4-203ENST00000488937 GNASQ5JWF2 1037 aa5.81□□□□□ -1.48
PRPF4-203ENST00000488937 ADGRE2Q9UHX3 823 aa5.81□□□□□ -1.48
PRPF4-203ENST00000488937 AP1G2O75843 785 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 MAPTP10636 758 aaKnown RBP5.8□□□□□ -1.48
PRPF4-203ENST00000488937 FSTP19883 344 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 TNP2Q05952 138 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 SH3D19Q5HYK7 790 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 TRAPPC3LQ5T215 181 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 SHISA2Q6UWI4 295 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 NLRP8Q86W28 1048 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 MICALL1Q8N3F8 863 aa5.8□□□□□ -1.48
PRPF4-203ENST00000488937 ATP1B4Q9UN42 357 aaPredicted RBP5.8□□□□□ -1.48
PRPF4-203ENST00000488937 A0A0A0MRY4 1105 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 ATXN7O15265 892 aaPredicted RBP5.79□□□□□ -1.48
PRPF4-203ENST00000488937 GIGYF1O75420 1035 aaPredicted RBP5.79□□□□□ -1.48
PRPF4-203ENST00000488937 GNRH1P01148 92 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 SKIV2LQ15477 1246 aaKnown RBP5.79□□□□□ -1.48
PRPF4-203ENST00000488937 ARHGEF10LQ9HCE6 1279 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 GOPCQ9HD26 462 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 USP21Q9UK80 565 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 STARD13Q9Y3M8 1113 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 PCDHB9Q9Y5E1 797 aa5.79□□□□□ -1.48
PRPF4-203ENST00000488937 ZBBXA8MT70 800 aa5.78□□□□□ -1.48
PRPF4-203ENST00000488937 ADARB2-AS1A8MUL3 147 aa5.78□□□□□ -1.48
PRPF4-203ENST00000488937 ADAMTS4O75173 837 aa5.78□□□□□ -1.48
PRPF4-203ENST00000488937 ZSCAN10Q96SZ4 725 aaPredicted RBP5.78□□□□□ -1.48
PRPF4-203ENST00000488937 ESYT1Q9BSJ8 1104 aa5.78□□□□□ -1.48
PRPF4-203ENST00000488937 ZBTB7CA1YPR0 619 aa5.77□□□□□ -1.49
PRPF4-203ENST00000488937 ALBP02768 609 aa5.77□□□□□ -1.49
PRPF4-203ENST00000488937 CENPCQ03188 943 aa5.77□□□□□ -1.49
PRPF4-203ENST00000488937 C4orf17Q53FE4 359 aa5.77□□□□□ -1.49
PRPF4-203ENST00000488937 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
PRPF4-203ENST00000488937 ARID3AQ99856 593 aa5.77□□□□□ -1.49
PRPF4-203ENST00000488937 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms