RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 FMNL2Q96PY5 1086 aa15.9■□□□□ 0.14
CCHCR1-215ENST00000488920 NARFQ9UHQ1 456 aa15.9■□□□□ 0.14
CCHCR1-215ENST00000488920 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
CCHCR1-215ENST00000488920 HEG1Q9ULI3 1381 aa15.89■□□□□ 0.13
CCHCR1-215ENST00000488920 C10orf71Q711Q0 1435 aa15.89■□□□□ 0.13
CCHCR1-215ENST00000488920 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-215ENST00000488920 TEX13AQ9BXU3 409 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-215ENST00000488920 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
CCHCR1-215ENST00000488920 CHD4Q14839 1912 aa15.89■□□□□ 0.13
CCHCR1-215ENST00000488920 COL15A1P39059 1388 aa15.88■□□□□ 0.13
CCHCR1-215ENST00000488920 EIF5P55010 431 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-215ENST00000488920 DDX10Q13206 875 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-215ENST00000488920 NFIXQ14938 502 aa15.88■□□□□ 0.13
CCHCR1-215ENST00000488920 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
CCHCR1-215ENST00000488920 A1BGP04217 495 aa15.87■□□□□ 0.13
CCHCR1-215ENST00000488920 KCNA3P22001 575 aa15.87■□□□□ 0.13
CCHCR1-215ENST00000488920 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-215ENST00000488920 C4AP0C0L4 1744 aa15.86■□□□□ 0.13
CCHCR1-215ENST00000488920 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-215ENST00000488920 A0A087WZG4 1122 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 PRAMEF22A3QJZ6 481 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 NEFMP07197 916 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 CHRNA5P30532 468 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 ARHGAP27Q6ZUM4 889 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 PLEKHF1Q96S99 279 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 MIS18AQ9NYP9 233 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 PIM2Q9P1W9 311 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
CCHCR1-215ENST00000488920 SERPINB2P05120 415 aa15.84■□□□□ 0.13
CCHCR1-215ENST00000488920 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-215ENST00000488920 ZNF526Q8TF50 670 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-215ENST00000488920 ATP10DQ9P241 1426 aa15.84■□□□□ 0.13
CCHCR1-215ENST00000488920 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
CCHCR1-215ENST00000488920 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-215ENST00000488920 IL6STP40189 918 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-215ENST00000488920 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-215ENST00000488920 C1QTNF8P60827 252 aa15.83■□□□□ 0.12
CCHCR1-215ENST00000488920 RALBP1Q15311 655 aa15.83■□□□□ 0.12
CCHCR1-215ENST00000488920 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
CCHCR1-215ENST00000488920 SNRPA1P09661 255 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-215ENST00000488920 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-215ENST00000488920 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
CCHCR1-215ENST00000488920 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-215ENST00000488920 NFE2L2Q16236 605 aa15.81■□□□□ 0.12
CCHCR1-215ENST00000488920 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
CCHCR1-215ENST00000488920 PNNQ9H307 717 aaKnown RBP15.81■□□□□ 0.12
CCHCR1-215ENST00000488920 GPBP1L1Q9HC44 474 aaPredicted RBP15.81■□□□□ 0.12
CCHCR1-215ENST00000488920 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
CCHCR1-215ENST00000488920 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
CCHCR1-215ENST00000488920 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
CCHCR1-215ENST00000488920 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
CCHCR1-215ENST00000488920 ADCY9O60503 1353 aa15.79■□□□□ 0.12
CCHCR1-215ENST00000488920 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
CCHCR1-215ENST00000488920 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
CCHCR1-215ENST00000488920 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
CCHCR1-215ENST00000488920 CCDC24Q8N4L8 307 aa15.78■□□□□ 0.12
CCHCR1-215ENST00000488920 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
CCHCR1-215ENST00000488920 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
CCHCR1-215ENST00000488920 C2CD5Q86YS7 1000 aa15.77■□□□□ 0.12
CCHCR1-215ENST00000488920 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
CCHCR1-215ENST00000488920 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
CCHCR1-215ENST00000488920 SETDB2Q96T68 719 aa15.77■□□□□ 0.12
CCHCR1-215ENST00000488920 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-215ENST00000488920 H0YIN7 160 aa15.76■□□□□ 0.11
CCHCR1-215ENST00000488920 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
CCHCR1-215ENST00000488920 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
CCHCR1-215ENST00000488920 RIPK4P57078 832 aa15.75■□□□□ 0.11
CCHCR1-215ENST00000488920 C9orf131Q5VYM1 1079 aa15.75■□□□□ 0.11
CCHCR1-215ENST00000488920 NPHP1O15259 732 aa15.74■□□□□ 0.11
CCHCR1-215ENST00000488920 EIF4A1P60842 406 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-215ENST00000488920 PRR5LQ6MZQ0 368 aa15.74■□□□□ 0.11
CCHCR1-215ENST00000488920 TTLL6Q8N841 843 aa15.74■□□□□ 0.11
CCHCR1-215ENST00000488920 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
CCHCR1-215ENST00000488920 CCDC146Q8IYE0 955 aa15.73■□□□□ 0.11
CCHCR1-215ENST00000488920 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
CCHCR1-215ENST00000488920 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCHCR1-215ENST00000488920 PDE6BP35913 854 aa15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 TMPOP42166 694 aaKnown RBP15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 RNF181Q9P0P0 153 aa15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
CCHCR1-215ENST00000488920 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
CCHCR1-215ENST00000488920 NBPF5PQ86XG9 351 aaPredicted RBP15.71■□□□□ 0.11
CCHCR1-215ENST00000488920 TSPYL4Q9UJ04 414 aa15.71■□□□□ 0.11
CCHCR1-215ENST00000488920 KIF3CO14782 793 aa15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 ST5P78524 1137 aa15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 RASSF7Q02833 373 aa15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 HLFQ16534 295 aa15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 ADAMTS8Q9UP79 889 aa15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 NRXN2Q9P2S2 1712 aa15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 AFDNP55196 1824 aaKnown RBP15.7■□□□□ 0.1
CCHCR1-215ENST00000488920 FAM177BA6PVY3 158 aa15.69■□□□□ 0.1
CCHCR1-215ENST00000488920 MYL6BP14649 208 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms