RNA–Protein interactions for RNA: ENST00000488913.1

PATJ-209, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 3

Gene PATJ, Length 532 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-209ENST00000488913 USP3Q9Y6I4 520 aa11.39□□□□□ -0.59
PATJ-209ENST00000488913 SHISA8B8ZZ34 492 aa11.38□□□□□ -0.59
PATJ-209ENST00000488913 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
PATJ-209ENST00000488913 FIGNL1Q6PIW4 674 aa11.38□□□□□ -0.59
PATJ-209ENST00000488913 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
PATJ-209ENST00000488913 C1orf216Q8TAB5 229 aa11.38□□□□□ -0.59
PATJ-209ENST00000488913 EDARADDQ8WWZ3 215 aa11.38□□□□□ -0.59
PATJ-209ENST00000488913 NDFIP2Q9NV92 336 aa11.38□□□□□ -0.59
PATJ-209ENST00000488913 GDF2Q9UK05 429 aaPredicted RBP11.38□□□□□ -0.59
PATJ-209ENST00000488913 PARP3Q9Y6F1 533 aa11.38□□□□□ -0.59
PATJ-209ENST00000488913 A0A1W2PNR3 127 aa11.37□□□□□ -0.59
PATJ-209ENST00000488913 NBPF1Q3BBV0 1214 aa11.37□□□□□ -0.59
PATJ-209ENST00000488913 RRAGCQ9HB90 399 aa11.37□□□□□ -0.59
PATJ-209ENST00000488913 IQSEC3Q9UPP2 1182 aaPredicted RBP11.37□□□□□ -0.59
PATJ-209ENST00000488913 PCDHGC4Q9Y5F7 938 aa11.37□□□□□ -0.59
PATJ-209ENST00000488913 POM121CA8CG34 1229 aa11.36□□□□□ -0.59
PATJ-209ENST00000488913 BACH1O14867 736 aa11.36□□□□□ -0.59
PATJ-209ENST00000488913 LZTS3O60299 673 aaPredicted RBP11.36□□□□□ -0.59
PATJ-209ENST00000488913 SNRPNP63162 240 aaKnown RBP11.36□□□□□ -0.59
PATJ-209ENST00000488913 SUZ12Q15022 739 aaKnown RBP11.36□□□□□ -0.59
PATJ-209ENST00000488913 MTFR1Q15390 333 aa11.36□□□□□ -0.59
PATJ-209ENST00000488913 DNAAF2Q9NVR5 837 aaKnown RBP11.36□□□□□ -0.59
PATJ-209ENST00000488913 ATXN7O15265 892 aaPredicted RBP11.35□□□□□ -0.59
PATJ-209ENST00000488913 TATP17735 454 aaPredicted RBP11.35□□□□□ -0.59
PATJ-209ENST00000488913 FLIIQ13045 1269 aa11.35□□□□□ -0.59
PATJ-209ENST00000488913 NLRP8Q86W28 1048 aa11.35□□□□□ -0.59
PATJ-209ENST00000488913 GOLGA6L1Q8N7Z2 621 aa11.35□□□□□ -0.59
PATJ-209ENST00000488913 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
PATJ-209ENST00000488913 DCAF5Q96JK2 942 aa11.35□□□□□ -0.59
PATJ-209ENST00000488913 GGA1Q9UJY5 639 aa11.35□□□□□ -0.59
PATJ-209ENST00000488913 DCDC2BA2VCK2 349 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 AMPD1P23109 780 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 FOXK2Q01167 660 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 ZNF295-AS1Q8N0V1 137 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 ZNF358Q9NW07 568 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
PATJ-209ENST00000488913 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
PATJ-209ENST00000488913 BICDL1Q6ZP65 573 aa11.33□□□□□ -0.6
PATJ-209ENST00000488913 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
PATJ-209ENST00000488913 IGHA1P01876 353 aa11.32□□□□□ -0.6
PATJ-209ENST00000488913 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
PATJ-209ENST00000488913 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
PATJ-209ENST00000488913 TBCELQ5QJ74 424 aa11.31□□□□□ -0.6
PATJ-209ENST00000488913 ADAMTS19Q8TE59 1207 aa11.31□□□□□ -0.6
PATJ-209ENST00000488913 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
PATJ-209ENST00000488913 MKL2Q9ULH7 1088 aa11.31□□□□□ -0.6
PATJ-209ENST00000488913 NEURL1BA8MQ27 555 aa11.3□□□□□ -0.6
PATJ-209ENST00000488913 CD33P20138 364 aa11.3□□□□□ -0.6
PATJ-209ENST00000488913 TXLNAP40222 546 aa11.3□□□□□ -0.6
PATJ-209ENST00000488913 TNP2Q05952 138 aa11.3□□□□□ -0.6
PATJ-209ENST00000488913 PLA2G4EQ3MJ16 856 aa11.3□□□□□ -0.6
PATJ-209ENST00000488913 TNS4Q8IZW8 715 aa11.3□□□□□ -0.6
PATJ-209ENST00000488913 SCHIP1Q9P0W5 487 aaPredicted RBP11.3□□□□□ -0.6
PATJ-209ENST00000488913 SLCO4C1Q6ZQN7 724 aa11.29□□□□□ -0.6
PATJ-209ENST00000488913 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
PATJ-209ENST00000488913 TRIM50Q86XT4 487 aa11.28□□□□□ -0.6
PATJ-209ENST00000488913 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
PATJ-209ENST00000488913 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
PATJ-209ENST00000488913 HCN2Q9UL51 889 aa11.28□□□□□ -0.6
PATJ-209ENST00000488913 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
PATJ-209ENST00000488913 ARAFP10398 606 aa11.27□□□□□ -0.61
PATJ-209ENST00000488913 NOS2P35228 1153 aa11.27□□□□□ -0.61
PATJ-209ENST00000488913 SLC9A9Q8IVB4 645 aa11.27□□□□□ -0.61
PATJ-209ENST00000488913 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
PATJ-209ENST00000488913 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
PATJ-209ENST00000488913 USP17L3A6NCW0 530 aa11.26□□□□□ -0.61
PATJ-209ENST00000488913 USP17L4A6NCW7 530 aa11.26□□□□□ -0.61
PATJ-209ENST00000488913 MSTNO14793 375 aa11.26□□□□□ -0.61
PATJ-209ENST00000488913 EPXP11678 715 aa11.26□□□□□ -0.61
PATJ-209ENST00000488913 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
PATJ-209ENST00000488913 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
PATJ-209ENST00000488913 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
PATJ-209ENST00000488913 TEAD4Q15561 434 aa11.25□□□□□ -0.61
PATJ-209ENST00000488913 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
PATJ-209ENST00000488913 UCN2Q96RP3 112 aa11.25□□□□□ -0.61
PATJ-209ENST00000488913 PRR12Q9ULL5 1215 aa11.25□□□□□ -0.61
PATJ-209ENST00000488913 KIAA1024Q9UPX6 916 aa11.25□□□□□ -0.61
PATJ-209ENST00000488913 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
PATJ-209ENST00000488913 ITGB2P05107 769 aa11.24□□□□□ -0.61
PATJ-209ENST00000488913 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
PATJ-209ENST00000488913 EPHA4P54764 986 aa11.24□□□□□ -0.61
PATJ-209ENST00000488913 NEUROD4Q9HD90 331 aa11.24□□□□□ -0.61
PATJ-209ENST00000488913 ATP9BO43861 1147 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 FAM157BP0CG42 384 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 ADH6P28332 368 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 PCBP4P57723 403 aaKnown RBP11.23□□□□□ -0.61
PATJ-209ENST00000488913 CLDN10P78369 228 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 FAM182BQ5T319 152 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 LRRC69Q6ZNQ3 347 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 CLUAP1Q96AJ1 413 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 SPOCK3Q9BQ16 436 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 STRN4Q9NRL3 753 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 MKRN1Q9UHC7 482 aaKnown RBP11.23□□□□□ -0.61
PATJ-209ENST00000488913 KLF15Q9UIH9 416 aa11.23□□□□□ -0.61
PATJ-209ENST00000488913 SERTM1A2A2V5 107 aa11.22□□□□□ -0.61
PATJ-209ENST00000488913 GRIN2CQ14957 1233 aa11.22□□□□□ -0.61
PATJ-209ENST00000488913 SH3PXD2AQ5TCZ1 1133 aa11.22□□□□□ -0.61
PATJ-209ENST00000488913 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms