RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 NIFKQ9BYG3 293 aaKnown RBP7.24□□□□□ -1.25
CCDC93-209ENST00000488908 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
CCDC93-209ENST00000488908 INHAP05111 366 aa7.23□□□□□ -1.25
CCDC93-209ENST00000488908 CHRNA4P43681 627 aa7.23□□□□□ -1.25
CCDC93-209ENST00000488908 AVENQ9NQS1 362 aaPredicted RBP7.23□□□□□ -1.25
CCDC93-209ENST00000488908 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
CCDC93-209ENST00000488908 GDF10P55107 478 aa7.22□□□□□ -1.25
CCDC93-209ENST00000488908 NBPF1Q3BBV0 1214 aa7.22□□□□□ -1.25
CCDC93-209ENST00000488908 ARSJQ5FYB0 599 aaPredicted RBP7.22□□□□□ -1.25
CCDC93-209ENST00000488908 FAM182BQ5T319 152 aa7.22□□□□□ -1.25
CCDC93-209ENST00000488908 TBC1D2BQ9UPU7 963 aa7.22□□□□□ -1.25
CCDC93-209ENST00000488908 A0A1W2PNR3 127 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 DCDC2BA2VCK2 349 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 CD33P20138 364 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 SCNN1DP51172 638 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 SMTNP53814 917 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 TNP2Q05952 138 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.26
CCDC93-209ENST00000488908 KHNYNO15037 678 aaKnown RBP7.2□□□□□ -1.26
CCDC93-209ENST00000488908 TATP17735 454 aaPredicted RBP7.2□□□□□ -1.26
CCDC93-209ENST00000488908 FCHSD1Q86WN1 690 aa7.2□□□□□ -1.26
CCDC93-209ENST00000488908 MAP7D1Q3KQU3 841 aa7.19□□□□□ -1.26
CCDC93-209ENST00000488908 ZDHHC3Q9NYG2 299 aa7.19□□□□□ -1.26
CCDC93-209ENST00000488908 KLF15Q9UIH9 416 aa7.19□□□□□ -1.26
CCDC93-209ENST00000488908 PRR12Q9ULL5 1215 aa7.19□□□□□ -1.26
CCDC93-209ENST00000488908 GJA3Q9Y6H8 435 aa7.19□□□□□ -1.26
CCDC93-209ENST00000488908 FAM157BP0CG42 384 aa7.18□□□□□ -1.26
CCDC93-209ENST00000488908 SPATA31C1P0DKV0 1188 aa7.18□□□□□ -1.26
CCDC93-209ENST00000488908 DOC2BQ14184 412 aa7.18□□□□□ -1.26
CCDC93-209ENST00000488908 ZNF468Q5VIY5 522 aaPredicted RBP7.18□□□□□ -1.26
CCDC93-209ENST00000488908 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
CCDC93-209ENST00000488908 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
CCDC93-209ENST00000488908 GATA4P43694 442 aa7.17□□□□□ -1.26
CCDC93-209ENST00000488908 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
CCDC93-209ENST00000488908 PCBP4P57723 403 aaKnown RBP7.17□□□□□ -1.26
CCDC93-209ENST00000488908 IRF5Q13568 498 aa7.17□□□□□ -1.26
CCDC93-209ENST00000488908 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
CCDC93-209ENST00000488908 A6NJY4 79 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 SPDYE3A6NKU9 549 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 CDK2AP1O14519 115 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 PLPP7Q8NBV4 271 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 TRIM11Q96F44 468 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 SLC4A9Q96Q91 983 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 ZIC5Q96T25 663 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 CABP1Q9NZU7 370 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 MARK1Q9P0L2 795 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 SERTAD1Q9UHV2 236 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 HCN2Q9UL51 889 aa7.16□□□□□ -1.26
CCDC93-209ENST00000488908 ITGB7P26010 798 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 VAC14Q08AM6 782 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 LAMC2Q13753 1193 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 MTFR1Q15390 333 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 BICDL1Q6ZP65 573 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 PSMG3-AS1Q96PY0 264 aa7.15□□□□□ -1.26
CCDC93-209ENST00000488908 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
CCDC93-209ENST00000488908 ELOA3CA0A087WX78 387 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-209ENST00000488908 ELOA3DA6NLF2 546 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-209ENST00000488908 TMEM229AB2RXF0 380 aa7.14□□□□□ -1.27
CCDC93-209ENST00000488908 ALAS2P22557 587 aa7.14□□□□□ -1.27
CCDC93-209ENST00000488908 ELOA3BQ3SY89 546 aa7.14□□□□□ -1.27
CCDC93-209ENST00000488908 ZMYM1Q5SVZ6 1142 aa7.14□□□□□ -1.27
CCDC93-209ENST00000488908 ELOA3Q8NG57 546 aa7.14□□□□□ -1.27
CCDC93-209ENST00000488908 WASHC4Q2M389 1173 aa7.13□□□□□ -1.27
CCDC93-209ENST00000488908 PRRT3Q5FWE3 981 aa7.13□□□□□ -1.27
CCDC93-209ENST00000488908 EFSO43281 561 aa7.12□□□□□ -1.27
CCDC93-209ENST00000488908 SEMA3FQ13275 785 aa7.12□□□□□ -1.27
CCDC93-209ENST00000488908 STRN4Q9NRL3 753 aa7.12□□□□□ -1.27
CCDC93-209ENST00000488908 USP3Q9Y6I4 520 aa7.12□□□□□ -1.27
CCDC93-209ENST00000488908 BACH1O14867 736 aa7.11□□□□□ -1.27
CCDC93-209ENST00000488908 APBA3O96018 575 aa7.11□□□□□ -1.27
CCDC93-209ENST00000488908 SOX11P35716 441 aa7.11□□□□□ -1.27
CCDC93-209ENST00000488908 ABL2P42684 1182 aa7.11□□□□□ -1.27
CCDC93-209ENST00000488908 SYT9Q86SS6 491 aa7.11□□□□□ -1.27
CCDC93-209ENST00000488908 GDPD2Q9HCC8 539 aa7.1□□□□□ -1.27
CCDC93-209ENST00000488908 PARP3Q9Y6F1 533 aa7.1□□□□□ -1.27
CCDC93-209ENST00000488908 SIN3BO75182 1162 aa7.09□□□□□ -1.27
CCDC93-209ENST00000488908 RSPO4Q2I0M5 234 aaPredicted RBP7.09□□□□□ -1.27
CCDC93-209ENST00000488908 PCDHGA11Q9Y5H2 935 aa7.09□□□□□ -1.27
CCDC93-209ENST00000488908 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 TXLNAP40222 546 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 EML3Q32P44 896 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 NACC1Q96RE7 527 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 MDFIQ99750 246 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
CCDC93-209ENST00000488908 SCHIP1Q9P0W5 487 aaPredicted RBP7.08□□□□□ -1.28
CCDC93-209ENST00000488908 GPC6Q9Y625 555 aaPredicted RBP7.08□□□□□ -1.28
CCDC93-209ENST00000488908 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 M0R082 166 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 LRRC69Q6ZNQ3 347 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 ZNF417Q8TAU3 575 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 L3MBTL2Q969R5 705 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 ZNF587Q96SQ5 575 aaPredicted RBP7.07□□□□□ -1.28
CCDC93-209ENST00000488908 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 TPSG1Q9NRR2 321 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 NOD1Q9Y239 953 aa7.07□□□□□ -1.28
CCDC93-209ENST00000488908 LZTS3O60299 673 aaPredicted RBP7.06□□□□□ -1.28
CCDC93-209ENST00000488908 NOS2P35228 1153 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms