RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
PDPN-206ENST00000488631 LRP5O75197 1615 aa12.89□□□□□ -0.35
PDPN-206ENST00000488631 SSFA2P28290 1259 aa12.89□□□□□ -0.35
PDPN-206ENST00000488631 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
PDPN-206ENST00000488631 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
PDPN-206ENST00000488631 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
PDPN-206ENST00000488631 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
PDPN-206ENST00000488631 ITGB4P16144 1822 aa12.88□□□□□ -0.35
PDPN-206ENST00000488631 KCNQ3O43525 872 aa12.88□□□□□ -0.35
PDPN-206ENST00000488631 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
PDPN-206ENST00000488631 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
PDPN-206ENST00000488631 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
PDPN-206ENST00000488631 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
PDPN-206ENST00000488631 APAF1O14727 1248 aa12.87□□□□□ -0.35
PDPN-206ENST00000488631 ZPR1O75312 459 aa12.87□□□□□ -0.35
PDPN-206ENST00000488631 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
PDPN-206ENST00000488631 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
PDPN-206ENST00000488631 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
PDPN-206ENST00000488631 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
PDPN-206ENST00000488631 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
PDPN-206ENST00000488631 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
PDPN-206ENST00000488631 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
PDPN-206ENST00000488631 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
PDPN-206ENST00000488631 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
PDPN-206ENST00000488631 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
PDPN-206ENST00000488631 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
PDPN-206ENST00000488631 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
PDPN-206ENST00000488631 LY75O60449 1722 aa12.85□□□□□ -0.35
PDPN-206ENST00000488631 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
PDPN-206ENST00000488631 PTGER2P43116 358 aa12.84□□□□□ -0.35
PDPN-206ENST00000488631 CALD1Q05682 793 aaKnown RBP12.84□□□□□ -0.35
PDPN-206ENST00000488631 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
PDPN-206ENST00000488631 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 A0A087WZG4 1122 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
PDPN-206ENST00000488631 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
PDPN-206ENST00000488631 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 SCN11AQ9UI33 1791 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 MRC1P22897 1456 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 C5P01031 1676 aa12.83□□□□□ -0.36
PDPN-206ENST00000488631 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
PDPN-206ENST00000488631 NPHP1O15259 732 aa12.82□□□□□ -0.36
PDPN-206ENST00000488631 A1BGP04217 495 aa12.82□□□□□ -0.36
PDPN-206ENST00000488631 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
PDPN-206ENST00000488631 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
PDPN-206ENST00000488631 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
PDPN-206ENST00000488631 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
PDPN-206ENST00000488631 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
PDPN-206ENST00000488631 MMP10P09238 476 aa12.81□□□□□ -0.36
PDPN-206ENST00000488631 USP16Q9Y5T5 823 aa12.81□□□□□ -0.36
PDPN-206ENST00000488631 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
PDPN-206ENST00000488631 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
PDPN-206ENST00000488631 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
PDPN-206ENST00000488631 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
PDPN-206ENST00000488631 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
PDPN-206ENST00000488631 TBC1D2BQ9UPU7 963 aa12.8□□□□□ -0.36
PDPN-206ENST00000488631 MYL6BP14649 208 aa12.79□□□□□ -0.36
PDPN-206ENST00000488631 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
PDPN-206ENST00000488631 SYT17Q9BSW7 474 aa12.79□□□□□ -0.36
PDPN-206ENST00000488631 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
PDPN-206ENST00000488631 COL15A1P39059 1388 aa12.79□□□□□ -0.36
PDPN-206ENST00000488631 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
PDPN-206ENST00000488631 GYS1P13807 737 aa12.78□□□□□ -0.36
PDPN-206ENST00000488631 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
PDPN-206ENST00000488631 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDPN-206ENST00000488631 GNAI1P63096 354 aa12.78□□□□□ -0.36
PDPN-206ENST00000488631 GPR162Q16538 588 aa12.78□□□□□ -0.36
PDPN-206ENST00000488631 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
PDPN-206ENST00000488631 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
PDPN-206ENST00000488631 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.37
PDPN-206ENST00000488631 FKBP8Q14318 412 aa12.77□□□□□ -0.37
PDPN-206ENST00000488631 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
PDPN-206ENST00000488631 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.37
PDPN-206ENST00000488631 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
PDPN-206ENST00000488631 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
PDPN-206ENST00000488631 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
PDPN-206ENST00000488631 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
PDPN-206ENST00000488631 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
PDPN-206ENST00000488631 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
PDPN-206ENST00000488631 ELL2O00472 640 aaPredicted RBP12.75□□□□□ -0.37
PDPN-206ENST00000488631 CHL1O00533 1208 aa12.75□□□□□ -0.37
PDPN-206ENST00000488631 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
PDPN-206ENST00000488631 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
PDPN-206ENST00000488631 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
PDPN-206ENST00000488631 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
PDPN-206ENST00000488631 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
PDPN-206ENST00000488631 SETDB2Q96T68 719 aa12.74□□□□□ -0.37
PDPN-206ENST00000488631 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
PDPN-206ENST00000488631 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
PDPN-206ENST00000488631 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
PDPN-206ENST00000488631 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
PDPN-206ENST00000488631 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
PDPN-206ENST00000488631 KRT24Q2M2I5 525 aa12.73□□□□□ -0.37
PDPN-206ENST00000488631 HDGFL1Q5TGJ6 251 aa12.73□□□□□ -0.37
PDPN-206ENST00000488631 NLGN2Q8NFZ4 835 aa12.73□□□□□ -0.37
PDPN-206ENST00000488631 TJP1Q07157 1748 aa12.72□□□□□ -0.37
PDPN-206ENST00000488631 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms