RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SMTNP53814 917 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 TMEM132AQ24JP5 1023 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 TBC1D9Q6ZT07 1266 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 ZNF295-AS1Q8N0V1 137 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 AIDAQ96BJ3 306 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 SUV39H2Q9H5I1 410 aa6.95□□□□□ -1.3
CD46-215ENST00000488596 TMEM229AB2RXF0 380 aa6.94□□□□□ -1.3
CD46-215ENST00000488596 MAP7D1Q3KQU3 841 aa6.94□□□□□ -1.3
CD46-215ENST00000488596 NIFKQ9BYG3 293 aaKnown RBP6.94□□□□□ -1.3
CD46-215ENST00000488596 SERTAD1Q9UHV2 236 aa6.94□□□□□ -1.3
CD46-215ENST00000488596 PCDHGC4Q9Y5F7 938 aa6.94□□□□□ -1.3
CD46-215ENST00000488596 USP3Q9Y6I4 520 aa6.94□□□□□ -1.3
CD46-215ENST00000488596 PIK3CDO00329 1044 aa6.93□□□□□ -1.3
CD46-215ENST00000488596 AMPD1P23109 780 aa6.93□□□□□ -1.3
CD46-215ENST00000488596 SEMA3FQ13275 785 aa6.93□□□□□ -1.3
CD46-215ENST00000488596 SLCO4C1Q6ZQN7 724 aa6.93□□□□□ -1.3
CD46-215ENST00000488596 BTBD6Q96KE9 485 aa6.93□□□□□ -1.3
CD46-215ENST00000488596 NEURL1BA8MQ27 555 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 EPXP11678 715 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 WASHC4Q2M389 1173 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 FIGNL1Q6PIW4 674 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 NLRP8Q86W28 1048 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 SLC4A9Q96Q91 983 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 KRTAP4-12Q9BQ66 201 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 KLF15Q9UIH9 416 aa6.92□□□□□ -1.3
CD46-215ENST00000488596 IQSEC3Q9UPP2 1182 aaPredicted RBP6.92□□□□□ -1.3
CD46-215ENST00000488596 A0A1W2PNR3 127 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 DCDC2BA2VCK2 349 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 ATXN7O15265 892 aaPredicted RBP6.91□□□□□ -1.3
CD46-215ENST00000488596 ARAFP10398 606 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 MAPTP10636 758 aaKnown RBP6.91□□□□□ -1.3
CD46-215ENST00000488596 TNP2Q05952 138 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 GRIN2CQ14957 1233 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 MTFR1Q15390 333 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 PCDHGA11Q9Y5H2 935 aa6.91□□□□□ -1.3
CD46-215ENST00000488596 A6NJY4 79 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 CDK2AP1O14519 115 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 CD33P20138 364 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 ITGB7P26010 798 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 ARSJQ5FYB0 599 aaPredicted RBP6.9□□□□□ -1.3
CD46-215ENST00000488596 ZMYM1Q5SVZ6 1142 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 ZIC5Q96T25 663 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 PARP3Q9Y6F1 533 aa6.9□□□□□ -1.3
CD46-215ENST00000488596 GNB5O14775 395 aa6.89□□□□□ -1.31
CD46-215ENST00000488596 KHNYNO15037 678 aaKnown RBP6.89□□□□□ -1.31
CD46-215ENST00000488596 DGKGP49619 791 aa6.89□□□□□ -1.31
CD46-215ENST00000488596 MCM6Q14566 821 aa6.89□□□□□ -1.31
CD46-215ENST00000488596 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
CD46-215ENST00000488596 NOP53Q9NZM5 478 aaKnown RBP6.89□□□□□ -1.31
CD46-215ENST00000488596 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
CD46-215ENST00000488596 SOX11P35716 441 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 NBPF1Q3BBV0 1214 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 FAM182BQ5T319 152 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 CHSY3Q70JA7 882 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 FCHSD1Q86WN1 690 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 GTF3C3Q9Y5Q9 886 aa6.88□□□□□ -1.31
CD46-215ENST00000488596 BTBD11A6QL63 1104 aa6.87□□□□□ -1.31
CD46-215ENST00000488596 STRN4Q9NRL3 753 aa6.87□□□□□ -1.31
CD46-215ENST00000488596 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
CD46-215ENST00000488596 COG6Q9Y2V7 657 aa6.87□□□□□ -1.31
CD46-215ENST00000488596 SKIP12755 728 aa6.86□□□□□ -1.31
CD46-215ENST00000488596 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
CD46-215ENST00000488596 ADH6P28332 368 aa6.86□□□□□ -1.31
CD46-215ENST00000488596 TXLNAP40222 546 aa6.86□□□□□ -1.31
CD46-215ENST00000488596 PCBP4P57723 403 aaKnown RBP6.86□□□□□ -1.31
CD46-215ENST00000488596 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
CD46-215ENST00000488596 ZDHHC1Q8WTX9 485 aa6.86□□□□□ -1.31
CD46-215ENST00000488596 ALG2Q9H553 416 aa6.86□□□□□ -1.31
CD46-215ENST00000488596 FAM157BP0CG42 384 aa6.85□□□□□ -1.31
CD46-215ENST00000488596 CHRNA4P43681 627 aa6.85□□□□□ -1.31
CD46-215ENST00000488596 EML3Q32P44 896 aa6.85□□□□□ -1.31
CD46-215ENST00000488596 AVENQ9NQS1 362 aaPredicted RBP6.85□□□□□ -1.31
CD46-215ENST00000488596 ZNF358Q9NW07 568 aa6.85□□□□□ -1.31
CD46-215ENST00000488596 GTF2IP78347 998 aa6.84□□□□□ -1.31
CD46-215ENST00000488596 NCOA4Q13772 614 aa6.84□□□□□ -1.31
CD46-215ENST00000488596 ZNF468Q5VIY5 522 aaPredicted RBP6.84□□□□□ -1.31
CD46-215ENST00000488596 SCHIP1Q9P0W5 487 aaPredicted RBP6.84□□□□□ -1.31
CD46-215ENST00000488596 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
CD46-215ENST00000488596 GJA3Q9Y6H8 435 aa6.84□□□□□ -1.31
CD46-215ENST00000488596 BACH1O14867 736 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 EFSO43281 561 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 EPHA4P54764 986 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 C7orf43Q8WVR3 580 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 POM121Q96HA1 1249 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 MARK1Q9P0L2 795 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
CD46-215ENST00000488596 LZTS3O60299 673 aaPredicted RBP6.82□□□□□ -1.32
CD46-215ENST00000488596 NOS2P35228 1153 aa6.82□□□□□ -1.32
CD46-215ENST00000488596 DOC2BQ14184 412 aa6.82□□□□□ -1.32
CD46-215ENST00000488596 TEAD4Q15561 434 aa6.82□□□□□ -1.32
CD46-215ENST00000488596 TBCELQ5QJ74 424 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms