RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
PCYT1A-215ENST00000488235 BCS1LQ9Y276 419 aa15.09■□□□□ 0.01
PCYT1A-215ENST00000488235 COL15A1P39059 1388 aa15.09■□□□□ 0.01
PCYT1A-215ENST00000488235 CEMIPQ8WUJ3 1361 aa15.09■□□□□ 0.01
PCYT1A-215ENST00000488235 SIPA1L3O60292 1781 aaPredicted RBP15.08■□□□□ 0.01
PCYT1A-215ENST00000488235 ZNF790Q6PG37 636 aa15.08■□□□□ 0
PCYT1A-215ENST00000488235 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0
PCYT1A-215ENST00000488235 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
PCYT1A-215ENST00000488235 CHRNA5P30532 468 aa15.07■□□□□ 0
PCYT1A-215ENST00000488235 NFIXQ14938 502 aa15.07■□□□□ 0
PCYT1A-215ENST00000488235 BRCA1P38398 1863 aaKnown RBP15.07■□□□□ 0
PCYT1A-215ENST00000488235 ZPR1O75312 459 aa15.06■□□□□ 0
PCYT1A-215ENST00000488235 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
PCYT1A-215ENST00000488235 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
PCYT1A-215ENST00000488235 TEFQ10587 303 aa15.06■□□□□ 0
PCYT1A-215ENST00000488235 TTC5Q8N0Z6 440 aa15.06■□□□□ 0
PCYT1A-215ENST00000488235 CFAP53Q96M91 514 aa15.06■□□□□ 0
PCYT1A-215ENST00000488235 NARFQ9UHQ1 456 aa15.06■□□□□ 0
PCYT1A-215ENST00000488235 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
PCYT1A-215ENST00000488235 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
PCYT1A-215ENST00000488235 PRAMEF22A3QJZ6 481 aa15.05■□□□□ -0
PCYT1A-215ENST00000488235 FCHSD2O94868 740 aa15.05■□□□□ -0
PCYT1A-215ENST00000488235 EIF5P55010 431 aaKnown RBP15.05■□□□□ -0
PCYT1A-215ENST00000488235 DCTN1Q14203 1278 aa15.05■□□□□ -0
PCYT1A-215ENST00000488235 CARMIL3Q8ND23 1372 aa15.04■□□□□ -0
PCYT1A-215ENST00000488235 MCM10Q7L590 875 aa15.04■□□□□ -0
PCYT1A-215ENST00000488235 GPBP1L1Q9HC44 474 aaPredicted RBP15.04■□□□□ -0
PCYT1A-215ENST00000488235 STARD3NLO95772 234 aa15.03■□□□□ -0
PCYT1A-215ENST00000488235 A1BGP04217 495 aa15.03■□□□□ -0
PCYT1A-215ENST00000488235 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
PCYT1A-215ENST00000488235 AFDNP55196 1824 aaKnown RBP15.02■□□□□ -0
PCYT1A-215ENST00000488235 BTBD11A6QL63 1104 aa15.02■□□□□ -0
PCYT1A-215ENST00000488235 PIP4K2AP48426 406 aaPredicted RBP15.02■□□□□ -0
PCYT1A-215ENST00000488235 NUDCQ9Y266 331 aa15.02■□□□□ -0
PCYT1A-215ENST00000488235 NRXN2Q9P2S2 1712 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 SERPINB2P05120 415 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 BICDL1Q6ZP65 573 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 PIM2Q9P1W9 311 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
PCYT1A-215ENST00000488235 KIF3CO14782 793 aa15□□□□□ -0.01
PCYT1A-215ENST00000488235 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
PCYT1A-215ENST00000488235 ZNF330Q9Y3S2 320 aaPredicted RBP15□□□□□ -0.01
PCYT1A-215ENST00000488235 USP16Q9Y5T5 823 aa15□□□□□ -0.01
PCYT1A-215ENST00000488235 CCDC24Q8N4L8 307 aa14.99□□□□□ -0.01
PCYT1A-215ENST00000488235 PCNTO95613 3336 aa14.99□□□□□ -0.01
PCYT1A-215ENST00000488235 ARFGEF1Q9Y6D6 1849 aa14.99□□□□□ -0.01
PCYT1A-215ENST00000488235 SCN7AQ01118 1682 aa14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 CAMTA2O94983 1202 aa14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 IL6STP40189 918 aaPredicted RBP14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 PRELPP51888 382 aa14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 PLEKHF1Q96S99 279 aa14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 MIS18AQ9NYP9 233 aa14.98□□□□□ -0.01
PCYT1A-215ENST00000488235 RASSF7Q02833 373 aa14.96□□□□□ -0.01
PCYT1A-215ENST00000488235 RTF1Q92541 710 aaKnown RBP14.96□□□□□ -0.01
PCYT1A-215ENST00000488235 THUMPD2Q9BTF0 503 aaKnown RBP14.96□□□□□ -0.01
PCYT1A-215ENST00000488235 A0A087WZG4 1122 aa14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 NBPF10Q6P3W6 841 aaKnown RBP14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 NBPF15Q8N660 670 aa14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 NMRK2Q9NPI5 230 aa14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
PCYT1A-215ENST00000488235 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
PCYT1A-215ENST00000488235 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
PCYT1A-215ENST00000488235 DZIP3Q86Y13 1208 aaKnown RBP14.94□□□□□ -0.02
PCYT1A-215ENST00000488235 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
PCYT1A-215ENST00000488235 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
PCYT1A-215ENST00000488235 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
PCYT1A-215ENST00000488235 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
PCYT1A-215ENST00000488235 DLEC1Q9Y238 1755 aa14.93□□□□□ -0.02
PCYT1A-215ENST00000488235 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
PCYT1A-215ENST00000488235 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
PCYT1A-215ENST00000488235 DLG5Q8TDM6 1919 aa14.92□□□□□ -0.02
PCYT1A-215ENST00000488235 H0YIN7 160 aa14.91□□□□□ -0.02
PCYT1A-215ENST00000488235 NFKBIEO00221 500 aa14.91□□□□□ -0.02
PCYT1A-215ENST00000488235 NFE2L2Q16236 605 aa14.91□□□□□ -0.02
PCYT1A-215ENST00000488235 HSPA6P17066 643 aa14.9□□□□□ -0.02
PCYT1A-215ENST00000488235 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
PCYT1A-215ENST00000488235 SETDB2Q96T68 719 aa14.9□□□□□ -0.02
PCYT1A-215ENST00000488235 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
PCYT1A-215ENST00000488235 SBF1O95248 1867 aa14.9□□□□□ -0.02
PCYT1A-215ENST00000488235 KDM3BQ7LBC6 1761 aa14.89□□□□□ -0.03
PCYT1A-215ENST00000488235 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
PCYT1A-215ENST00000488235 CNBD1Q8NA66 436 aa14.89□□□□□ -0.03
PCYT1A-215ENST00000488235 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
PCYT1A-215ENST00000488235 HLFQ16534 295 aa14.88□□□□□ -0.03
PCYT1A-215ENST00000488235 ZNF622Q969S3 477 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCYT1A-215ENST00000488235 C21orf2O43822 256 aa14.87□□□□□ -0.03
PCYT1A-215ENST00000488235 NPM2Q86SE8 214 aaKnown RBP14.87□□□□□ -0.03
PCYT1A-215ENST00000488235 TOMM70O94826 608 aa14.86□□□□□ -0.03
PCYT1A-215ENST00000488235 SRGNP10124 158 aa14.86□□□□□ -0.03
PCYT1A-215ENST00000488235 LMNB1P20700 586 aa14.86□□□□□ -0.03
PCYT1A-215ENST00000488235 PDE6BP35913 854 aa14.86□□□□□ -0.03
PCYT1A-215ENST00000488235 NGEFQ8N5V2 710 aa14.86□□□□□ -0.03
PCYT1A-215ENST00000488235 RRAGCQ9HB90 399 aa14.86□□□□□ -0.03
PCYT1A-215ENST00000488235 LAMB4A4D0S4 1761 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms