RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 CANXP27824 592 aaKnown RBP31.39■■■□□ 2.62
RNF38-208ENST00000488058 USP42Q9H9J4 1324 aaKnown RBP31.38■■■□□ 2.61
RNF38-208ENST00000488058 COL15A1P39059 1388 aa31.36■■■□□ 2.61
RNF38-208ENST00000488058 YY1P25490 414 aa31.36■■■□□ 2.61
RNF38-208ENST00000488058 TEX13AQ9BXU3 409 aaPredicted RBP31.36■■■□□ 2.61
RNF38-208ENST00000488058 ZPR1O75312 459 aa31.35■■■□□ 2.61
RNF38-208ENST00000488058 WDR43Q15061 677 aaKnown RBP eCLIP31.35■■■□□ 2.61
RNF38-208ENST00000488058 PARP3Q9Y6F1 533 aa31.34■■■□□ 2.61
RNF38-208ENST00000488058 FKBP8Q14318 412 aa31.33■■■□□ 2.61
RNF38-208ENST00000488058 TAF7Q15545 349 aaPredicted RBP31.33■■■□□ 2.61
RNF38-208ENST00000488058 USPL1Q5W0Q7 1092 aa31.33■■■□□ 2.61
RNF38-208ENST00000488058 ZNF330Q9Y3S2 320 aaPredicted RBP31.33■■■□□ 2.61
RNF38-208ENST00000488058 ZNF316A6NFI3 1004 aaPredicted RBP31.32■■■□□ 2.6
RNF38-208ENST00000488058 CCDC146Q8IYE0 955 aa31.32■■■□□ 2.6
RNF38-208ENST00000488058 THUMPD2Q9BTF0 503 aaKnown RBP31.32■■■□□ 2.6
RNF38-208ENST00000488058 MIS18AQ9NYP9 233 aa31.32■■■□□ 2.6
RNF38-208ENST00000488058 NARFQ9UHQ1 456 aa31.29■■■□□ 2.6
RNF38-208ENST00000488058 WWC3Q9ULE0 1092 aa31.29■■■□□ 2.6
RNF38-208ENST00000488058 PRAMEF22A3QJZ6 481 aa31.28■■■□□ 2.6
RNF38-208ENST00000488058 RIPK4P57078 832 aa31.28■■■□□ 2.6
RNF38-208ENST00000488058 A1BGP04217 495 aa31.27■■■□□ 2.6
RNF38-208ENST00000488058 KDM3BQ7LBC6 1761 aa31.26■■■□□ 2.59
RNF38-208ENST00000488058 SNRPA1P09661 255 aaKnown RBP31.26■■■□□ 2.59
RNF38-208ENST00000488058 YBX3P16989 372 aaKnown RBP eCLIP31.26■■■□□ 2.59
RNF38-208ENST00000488058 EIF5P55010 431 aaKnown RBP31.26■■■□□ 2.59
RNF38-208ENST00000488058 PNISRQ8TF01 805 aaKnown RBP31.26■■■□□ 2.59
RNF38-208ENST00000488058 USP16Q9Y5T5 823 aa31.26■■■□□ 2.59
RNF38-208ENST00000488058 KIF13BQ9NQT8 1826 aa31.26■■■□□ 2.59
RNF38-208ENST00000488058 CHD4Q14839 1912 aa31.26■■■□□ 2.59
RNF38-208ENST00000488058 A0A087WZG4 1122 aa31.25■■■□□ 2.59
RNF38-208ENST00000488058 NPM2Q86SE8 214 aaKnown RBP31.25■■■□□ 2.59
RNF38-208ENST00000488058 RRP7AQ9Y3A4 280 aaKnown RBP31.25■■■□□ 2.59
RNF38-208ENST00000488058 TMPOP42166 694 aaKnown RBP31.24■■■□□ 2.59
RNF38-208ENST00000488058 DDR1Q08345 913 aa31.24■■■□□ 2.59
RNF38-208ENST00000488058 NEUROD2Q15784 382 aa31.24■■■□□ 2.59
RNF38-208ENST00000488058 ADAMTS8Q9UP79 889 aa31.24■■■□□ 2.59
RNF38-208ENST00000488058 C10orf71Q711Q0 1435 aa31.24■■■□□ 2.59
RNF38-208ENST00000488058 PIP4K2AP48426 406 aaPredicted RBP31.23■■■□□ 2.59
RNF38-208ENST00000488058 N4BP2Q86UW6 1770 aaPredicted RBP31.22■■■□□ 2.59
RNF38-208ENST00000488058 IL6STP40189 918 aaPredicted RBP31.22■■■□□ 2.59
RNF38-208ENST00000488058 RUNDC1Q96C34 613 aa31.22■■■□□ 2.59
RNF38-208ENST00000488058 LMOD3Q0VAK6 560 aa31.21■■■□□ 2.59
RNF38-208ENST00000488058 TBC1D2BQ9UPU7 963 aa31.21■■■□□ 2.59
RNF38-208ENST00000488058 GRIN3BO60391 1043 aa31.2■■■□□ 2.59
RNF38-208ENST00000488058 TM4SF1P30408 202 aa31.2■■■□□ 2.59
RNF38-208ENST00000488058 BCL2L12Q9HB09 334 aa31.2■■■□□ 2.59
RNF38-208ENST00000488058 PXDNLA1KZ92 1463 aa31.2■■■□□ 2.58
RNF38-208ENST00000488058 KIAA1551Q9HCM1 1747 aa31.19■■■□□ 2.58
RNF38-208ENST00000488058 POLRMTO00411 1230 aaKnown RBP31.19■■■□□ 2.58
RNF38-208ENST00000488058 NFIXQ14938 502 aa31.19■■■□□ 2.58
RNF38-208ENST00000488058 LAMB4A4D0S4 1761 aa31.19■■■□□ 2.58
RNF38-208ENST00000488058 SCN7AQ01118 1682 aa31.19■■■□□ 2.58
RNF38-208ENST00000488058 BICDL1Q6ZP65 573 aa31.18■■■□□ 2.58
RNF38-208ENST00000488058 A0A0G2JLW4 131 aa31.17■■■□□ 2.58
RNF38-208ENST00000488058 TGFB2P61812 414 aa31.17■■■□□ 2.58
RNF38-208ENST00000488058 TSPYL4Q9UJ04 414 aa31.16■■■□□ 2.58
RNF38-208ENST00000488058 AFDNP55196 1824 aaKnown RBP31.15■■■□□ 2.58
RNF38-208ENST00000488058 EIF4A1P60842 406 aaKnown RBP31.15■■■□□ 2.58
RNF38-208ENST00000488058 DPEP1P16444 411 aa31.14■■■□□ 2.58
RNF38-208ENST00000488058 DZIP3Q86Y13 1208 aaKnown RBP31.14■■■□□ 2.58
RNF38-208ENST00000488058 SERPINB2P05120 415 aa31.12■■■□□ 2.57
RNF38-208ENST00000488058 BCORQ6W2J9 1755 aa31.12■■■□□ 2.57
RNF38-208ENST00000488058 GIGYF1O75420 1035 aaPredicted RBP31.11■■■□□ 2.57
RNF38-208ENST00000488058 TBC1D9BQ66K14 1250 aa31.11■■■□□ 2.57
RNF38-208ENST00000488058 NBPF26B4DH59 902 aa31.1■■■□□ 2.57
RNF38-208ENST00000488058 ANP32CO43423 234 aa31.1■■■□□ 2.57
RNF38-208ENST00000488058 CAMTA2O94983 1202 aa31.1■■■□□ 2.57
RNF38-208ENST00000488058 NBPF10Q6P3W6 841 aaKnown RBP31.1■■■□□ 2.57
RNF38-208ENST00000488058 NBPF15Q8N660 670 aa31.1■■■□□ 2.57
RNF38-208ENST00000488058 BCS1LQ9Y276 419 aa31.1■■■□□ 2.57
RNF38-208ENST00000488058 CCDC184Q52MB2 194 aa31.09■■■□□ 2.57
RNF38-208ENST00000488058 NRXN2Q9P2S2 1712 aa31.09■■■□□ 2.57
RNF38-208ENST00000488058 TRIM35Q9UPQ4 493 aa31.08■■■□□ 2.57
RNF38-208ENST00000488058 LAS1LQ9Y4W2 734 aaKnown RBP31.08■■■□□ 2.57
RNF38-208ENST00000488058 BRCA1P38398 1863 aaKnown RBP31.06■■■□□ 2.56
RNF38-208ENST00000488058 NGEFQ8N5V2 710 aa31.06■■■□□ 2.56
RNF38-208ENST00000488058 CHRNA5P30532 468 aa31.05■■■□□ 2.56
RNF38-208ENST00000488058 APAF1O14727 1248 aa31.04■■■□□ 2.56
RNF38-208ENST00000488058 BABAM1Q9NWV8 329 aa31.04■■■□□ 2.56
RNF38-208ENST00000488058 CARMIL3Q8ND23 1372 aa31.04■■■□□ 2.56
RNF38-208ENST00000488058 SETDB2Q96T68 719 aa31.03■■■□□ 2.56
RNF38-208ENST00000488058 PIM2Q9P1W9 311 aa31.03■■■□□ 2.56
RNF38-208ENST00000488058 NPHP1O15259 732 aa31.02■■■□□ 2.56
RNF38-208ENST00000488058 MYL6BP14649 208 aa31.02■■■□□ 2.56
RNF38-208ENST00000488058 KCNA3P22001 575 aa31.02■■■□□ 2.56
RNF38-208ENST00000488058 ZNF784Q8NCA9 323 aaPredicted RBP31.02■■■□□ 2.56
RNF38-208ENST00000488058 ZNF652Q9Y2D9 606 aa31.02■■■□□ 2.56
RNF38-208ENST00000488058 UTRNP46939 3433 aa31.01■■■□□ 2.56
RNF38-208ENST00000488058 EIF2S2P20042 333 aaKnown RBP31■■■□□ 2.55
RNF38-208ENST00000488058 CCDC24Q8N4L8 307 aa31■■■□□ 2.55
RNF38-208ENST00000488058 MRS2Q9HD23 443 aa31■■■□□ 2.55
RNF38-208ENST00000488058 GOLGB1Q14789 3259 aaKnown RBP30.99■■■□□ 2.55
RNF38-208ENST00000488058 CLEC4GQ6UXB4 293 aa30.98■■■□□ 2.55
RNF38-208ENST00000488058 CHL1O00533 1208 aa30.97■■■□□ 2.55
RNF38-208ENST00000488058 DALRD3Q5D0E6 543 aaKnown RBP30.97■■■□□ 2.55
RNF38-208ENST00000488058 PRR5LQ6MZQ0 368 aa30.97■■■□□ 2.55
RNF38-208ENST00000488058 ARFGEF1Q9Y6D6 1849 aa30.96■■■□□ 2.55
RNF38-208ENST00000488058 ARHGAP27Q6ZUM4 889 aa30.96■■■□□ 2.55
RNF38-208ENST00000488058 C2CD5Q86YS7 1000 aa30.96■■■□□ 2.55
RNF38-208ENST00000488058 CNBD1Q8NA66 436 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms