RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 RPS6KA4O75676 772 aa11.66□□□□□ -0.54
CPA4-207ENST00000488025 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
CPA4-207ENST00000488025 POLRMTO00411 1230 aaKnown RBP11.65□□□□□ -0.54
CPA4-207ENST00000488025 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
CPA4-207ENST00000488025 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
CPA4-207ENST00000488025 FLT4P35916 1363 aa11.65□□□□□ -0.55
CPA4-207ENST00000488025 ADAMTSL1Q8N6G6 1762 aa11.64□□□□□ -0.55
CPA4-207ENST00000488025 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
CPA4-207ENST00000488025 PHKG2P15735 406 aa11.64□□□□□ -0.55
CPA4-207ENST00000488025 SPG7Q9UQ90 795 aa11.64□□□□□ -0.55
CPA4-207ENST00000488025 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
CPA4-207ENST00000488025 USP42Q9H9J4 1324 aaKnown RBP11.63□□□□□ -0.55
CPA4-207ENST00000488025 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
CPA4-207ENST00000488025 FYB1O15117 783 aa11.63□□□□□ -0.55
CPA4-207ENST00000488025 DDNO94850 711 aaPredicted RBP11.63□□□□□ -0.55
CPA4-207ENST00000488025 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
CPA4-207ENST00000488025 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
CPA4-207ENST00000488025 THSD7BQ9C0I4 1608 aa11.63□□□□□ -0.55
CPA4-207ENST00000488025 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
CPA4-207ENST00000488025 PASKQ96RG2 1323 aa11.62□□□□□ -0.55
CPA4-207ENST00000488025 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
CPA4-207ENST00000488025 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
CPA4-207ENST00000488025 NEUROD1Q13562 356 aa11.62□□□□□ -0.55
CPA4-207ENST00000488025 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
CPA4-207ENST00000488025 PPM1GO15355 546 aaPredicted RBP11.61□□□□□ -0.55
CPA4-207ENST00000488025 TM4SF1P30408 202 aa11.61□□□□□ -0.55
CPA4-207ENST00000488025 RGS19P49795 217 aa11.61□□□□□ -0.55
CPA4-207ENST00000488025 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
CPA4-207ENST00000488025 IFNL2Q8IZJ0 200 aa11.61□□□□□ -0.55
CPA4-207ENST00000488025 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
CPA4-207ENST00000488025 TMEM88BA6NKF7 163 aa11.6□□□□□ -0.55
CPA4-207ENST00000488025 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
CPA4-207ENST00000488025 USPL1Q5W0Q7 1092 aa11.6□□□□□ -0.55
CPA4-207ENST00000488025 C2CD5Q86YS7 1000 aa11.6□□□□□ -0.55
CPA4-207ENST00000488025 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
CPA4-207ENST00000488025 EYA1Q99502 592 aa11.59□□□□□ -0.55
CPA4-207ENST00000488025 C21orf2O43822 256 aa11.58□□□□□ -0.56
CPA4-207ENST00000488025 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
CPA4-207ENST00000488025 GRM1Q13255 1194 aa11.58□□□□□ -0.56
CPA4-207ENST00000488025 NFIXQ14938 502 aa11.58□□□□□ -0.56
CPA4-207ENST00000488025 EAPPQ56P03 285 aaPredicted RBP11.58□□□□□ -0.56
CPA4-207ENST00000488025 CCDC24Q8N4L8 307 aa11.58□□□□□ -0.56
CPA4-207ENST00000488025 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.56
CPA4-207ENST00000488025 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
CPA4-207ENST00000488025 DEFB115Q30KQ5 88 aa11.57□□□□□ -0.56
CPA4-207ENST00000488025 POLR2AP24928 1970 aaKnown RBP11.57□□□□□ -0.56
CPA4-207ENST00000488025 AKAP11Q9UKA4 1901 aa11.56□□□□□ -0.56
CPA4-207ENST00000488025 ZPR1O75312 459 aa11.56□□□□□ -0.56
CPA4-207ENST00000488025 SERPINB2P05120 415 aa11.56□□□□□ -0.56
CPA4-207ENST00000488025 FMR1Q06787 632 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPA4-207ENST00000488025 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
CPA4-207ENST00000488025 ZNF622Q969S3 477 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPA4-207ENST00000488025 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
CPA4-207ENST00000488025 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
CPA4-207ENST00000488025 H0YIN7 160 aa11.55□□□□□ -0.56
CPA4-207ENST00000488025 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
CPA4-207ENST00000488025 BICDL1Q6ZP65 573 aa11.55□□□□□ -0.56
CPA4-207ENST00000488025 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
CPA4-207ENST00000488025 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
CPA4-207ENST00000488025 TAF1DQ9H5J8 278 aaPredicted RBP11.55□□□□□ -0.56
CPA4-207ENST00000488025 RASSF10A6NK89 507 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 ERVV-2B6SEH9 535 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 CABP4P57796 275 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 TESK2Q96S53 571 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 BCL2L12Q9HB09 334 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPA4-207ENST00000488025 ABT1Q9ULW3 272 aaKnown RBP11.54□□□□□ -0.56
CPA4-207ENST00000488025 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
CPA4-207ENST00000488025 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
CPA4-207ENST00000488025 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
CPA4-207ENST00000488025 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
CPA4-207ENST00000488025 BCORQ6W2J9 1755 aa11.52□□□□□ -0.57
CPA4-207ENST00000488025 ST20-MTHFSA0A0A6YYL1 179 aa11.52□□□□□ -0.57
CPA4-207ENST00000488025 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
CPA4-207ENST00000488025 NFATC2IPQ8NCF5 419 aa11.52□□□□□ -0.57
CPA4-207ENST00000488025 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.57
CPA4-207ENST00000488025 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
CPA4-207ENST00000488025 SOS1Q07889 1333 aaPredicted RBP11.52□□□□□ -0.57
CPA4-207ENST00000488025 COL15A1P39059 1388 aa11.52□□□□□ -0.57
CPA4-207ENST00000488025 AOC2O75106 756 aa11.51□□□□□ -0.57
CPA4-207ENST00000488025 ZNF530Q6P9A1 599 aaPredicted RBP11.51□□□□□ -0.57
CPA4-207ENST00000488025 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
CPA4-207ENST00000488025 IQCA1LA6NCM1 817 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 SOX10P56693 466 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
CPA4-207ENST00000488025 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 CAPNS2Q96L46 248 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
CPA4-207ENST00000488025 EPHX2P34913 555 aa11.49□□□□□ -0.57
CPA4-207ENST00000488025 DGKZQ13574 1117 aa11.49□□□□□ -0.57
CPA4-207ENST00000488025 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
CPA4-207ENST00000488025 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
CPA4-207ENST00000488025 HACL1Q9UJ83 578 aa11.49□□□□□ -0.57
CPA4-207ENST00000488025 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
CPA4-207ENST00000488025 OLFM4Q6UX06 510 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms