RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 DLG5Q8TDM6 1919 aa18.65■□□□□ 0.58
PFKFB3-213ENST00000487989 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
PFKFB3-213ENST00000487989 CCDC184Q52MB2 194 aa18.65■□□□□ 0.58
PFKFB3-213ENST00000487989 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
PFKFB3-213ENST00000487989 LMOD3Q0VAK6 560 aa18.64■□□□□ 0.57
PFKFB3-213ENST00000487989 ZBTB1Q9Y2K1 713 aa18.64■□□□□ 0.57
PFKFB3-213ENST00000487989 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
PFKFB3-213ENST00000487989 NLGN1Q8N2Q7 840 aa18.63■□□□□ 0.57
PFKFB3-213ENST00000487989 SOS1Q07889 1333 aaPredicted RBP18.63■□□□□ 0.57
PFKFB3-213ENST00000487989 SNRPA1P09661 255 aaKnown RBP18.62■□□□□ 0.57
PFKFB3-213ENST00000487989 GYS1P13807 737 aa18.62■□□□□ 0.57
PFKFB3-213ENST00000487989 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
PFKFB3-213ENST00000487989 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
PFKFB3-213ENST00000487989 MMP10P09238 476 aa18.61■□□□□ 0.57
PFKFB3-213ENST00000487989 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
PFKFB3-213ENST00000487989 USP42Q9H9J4 1324 aaKnown RBP18.6■□□□□ 0.57
PFKFB3-213ENST00000487989 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
PFKFB3-213ENST00000487989 ZPR1O75312 459 aa18.6■□□□□ 0.57
PFKFB3-213ENST00000487989 A1BGP04217 495 aa18.6■□□□□ 0.57
PFKFB3-213ENST00000487989 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
PFKFB3-213ENST00000487989 COL15A1P39059 1388 aa18.59■□□□□ 0.57
PFKFB3-213ENST00000487989 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
PFKFB3-213ENST00000487989 EIF5P55010 431 aaKnown RBP18.58■□□□□ 0.56
PFKFB3-213ENST00000487989 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
PFKFB3-213ENST00000487989 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
PFKFB3-213ENST00000487989 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
PFKFB3-213ENST00000487989 ZNF330Q9Y3S2 320 aaPredicted RBP18.58■□□□□ 0.56
PFKFB3-213ENST00000487989 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 A0A087WZG4 1122 aa18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 APAF1O14727 1248 aa18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 IL6STP40189 918 aaPredicted RBP18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 EIF4A1P60842 406 aaKnown RBP18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 FKBP8Q14318 412 aa18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 CD2APQ9Y5K6 639 aa18.57■□□□□ 0.56
PFKFB3-213ENST00000487989 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
PFKFB3-213ENST00000487989 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
PFKFB3-213ENST00000487989 GIGYF1O75420 1035 aaPredicted RBP18.55■□□□□ 0.56
PFKFB3-213ENST00000487989 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
PFKFB3-213ENST00000487989 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
PFKFB3-213ENST00000487989 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
PFKFB3-213ENST00000487989 LAS1LQ9Y4W2 734 aaKnown RBP18.54■□□□□ 0.56
PFKFB3-213ENST00000487989 KDM3BQ7LBC6 1761 aa18.54■□□□□ 0.56
PFKFB3-213ENST00000487989 TM4SF1P30408 202 aa18.53■□□□□ 0.56
PFKFB3-213ENST00000487989 CHL1O00533 1208 aa18.52■□□□□ 0.56
PFKFB3-213ENST00000487989 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.56
PFKFB3-213ENST00000487989 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
PFKFB3-213ENST00000487989 DDR1Q08345 913 aa18.51■□□□□ 0.55
PFKFB3-213ENST00000487989 GPR162Q16538 588 aa18.51■□□□□ 0.55
PFKFB3-213ENST00000487989 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
PFKFB3-213ENST00000487989 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
PFKFB3-213ENST00000487989 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
PFKFB3-213ENST00000487989 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
PFKFB3-213ENST00000487989 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
PFKFB3-213ENST00000487989 NFIXQ14938 502 aa18.49■□□□□ 0.55
PFKFB3-213ENST00000487989 GOLGB1Q14789 3259 aaKnown RBP18.49■□□□□ 0.55
PFKFB3-213ENST00000487989 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
PFKFB3-213ENST00000487989 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
PFKFB3-213ENST00000487989 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
PFKFB3-213ENST00000487989 BICDL1Q6ZP65 573 aa18.48■□□□□ 0.55
PFKFB3-213ENST00000487989 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
PFKFB3-213ENST00000487989 LAMB4A4D0S4 1761 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 SERPINB2P05120 415 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 MYL6BP14649 208 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 TGFB2P61812 414 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 TBC1D9BQ66K14 1250 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 C10orf71Q711Q0 1435 aa18.46■□□□□ 0.55
PFKFB3-213ENST00000487989 GNAI1P63096 354 aa18.45■□□□□ 0.54
PFKFB3-213ENST00000487989 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
PFKFB3-213ENST00000487989 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
PFKFB3-213ENST00000487989 A0A0G2JLW4 131 aa18.44■□□□□ 0.54
PFKFB3-213ENST00000487989 ZNF853P0CG23 659 aa18.44■□□□□ 0.54
PFKFB3-213ENST00000487989 YBX3P16989 372 aaKnown RBP eCLIP18.44■□□□□ 0.54
PFKFB3-213ENST00000487989 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
PFKFB3-213ENST00000487989 WWC3Q9ULE0 1092 aa18.44■□□□□ 0.54
PFKFB3-213ENST00000487989 UTRNP46939 3433 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 CCDC27Q2M243 656 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 ZNF652Q9Y2D9 606 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 SCN7AQ01118 1682 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
PFKFB3-213ENST00000487989 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
PFKFB3-213ENST00000487989 DPEP1P16444 411 aa18.42■□□□□ 0.54
PFKFB3-213ENST00000487989 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
PFKFB3-213ENST00000487989 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
PFKFB3-213ENST00000487989 PDIA6Q15084 440 aa18.41■□□□□ 0.54
PFKFB3-213ENST00000487989 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
PFKFB3-213ENST00000487989 KIF13BQ9NQT8 1826 aa18.41■□□□□ 0.54
PFKFB3-213ENST00000487989 CARMIL3Q8ND23 1372 aa18.41■□□□□ 0.54
PFKFB3-213ENST00000487989 HLFQ16534 295 aa18.4■□□□□ 0.54
PFKFB3-213ENST00000487989 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
PFKFB3-213ENST00000487989 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
PFKFB3-213ENST00000487989 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
PFKFB3-213ENST00000487989 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
PFKFB3-213ENST00000487989 RGL2O15211 777 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms