RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
UBR3-211ENST00000487689 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
UBR3-211ENST00000487689 CEP126Q9P2H0 1117 aa8.79□□□□□ -1
UBR3-211ENST00000487689 KLF15Q9UIH9 416 aa8.79□□□□□ -1
UBR3-211ENST00000487689 TBC1D2BQ9UPU7 963 aa8.79□□□□□ -1
UBR3-211ENST00000487689 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
UBR3-211ENST00000487689 SPATA31C1P0DKV0 1188 aa8.78□□□□□ -1
UBR3-211ENST00000487689 ADH6P28332 368 aa8.78□□□□□ -1
UBR3-211ENST00000487689 NKAPLQ5M9Q1 402 aa8.78□□□□□ -1
UBR3-211ENST00000487689 FCHSD1Q86WN1 690 aa8.78□□□□□ -1
UBR3-211ENST00000487689 WWC1Q8IX03 1113 aa8.78□□□□□ -1
UBR3-211ENST00000487689 WASHC4Q2M389 1173 aa8.77□□□□□ -1.01
UBR3-211ENST00000487689 ESCO1Q5FWF5 840 aa8.77□□□□□ -1.01
UBR3-211ENST00000487689 DOLKQ9UPQ8 538 aa8.77□□□□□ -1.01
UBR3-211ENST00000487689 ABL2P42684 1182 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 PLA2G4AP47712 749 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 USP4Q13107 963 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 ARTNQ5T4W7 220 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 TBC1D9Q6ZT07 1266 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 PPARGC1BQ86YN6 1023 aaKnown RBP8.76□□□□□ -1.01
UBR3-211ENST00000487689 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
UBR3-211ENST00000487689 ZFP64Q9NPA5 681 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 TPSG1Q9NRR2 321 aa8.76□□□□□ -1.01
UBR3-211ENST00000487689 ATXN7O15265 892 aaPredicted RBP8.75□□□□□ -1.01
UBR3-211ENST00000487689 STAU1O95793 577 aaKnown RBP8.75□□□□□ -1.01
UBR3-211ENST00000487689 CD33P20138 364 aa8.75□□□□□ -1.01
UBR3-211ENST00000487689 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
UBR3-211ENST00000487689 DCDC2BA2VCK2 349 aa8.74□□□□□ -1.01
UBR3-211ENST00000487689 DYRK3O43781 588 aa8.74□□□□□ -1.01
UBR3-211ENST00000487689 SEMA3FQ13275 785 aa8.74□□□□□ -1.01
UBR3-211ENST00000487689 TLR1Q15399 786 aa8.74□□□□□ -1.01
UBR3-211ENST00000487689 NLRP8Q86W28 1048 aa8.74□□□□□ -1.01
UBR3-211ENST00000487689 MAPTP10636 758 aaKnown RBP8.73□□□□□ -1.01
UBR3-211ENST00000487689 ATP4AP20648 1035 aa8.73□□□□□ -1.01
UBR3-211ENST00000487689 TNP2Q05952 138 aa8.73□□□□□ -1.01
UBR3-211ENST00000487689 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
UBR3-211ENST00000487689 ETNK1Q9HBU6 452 aa8.73□□□□□ -1.01
UBR3-211ENST00000487689 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
UBR3-211ENST00000487689 AVENQ9NQS1 362 aaPredicted RBP8.73□□□□□ -1.01
UBR3-211ENST00000487689 GPR37L1O60883 481 aa8.72□□□□□ -1.01
UBR3-211ENST00000487689 SOX11P35716 441 aa8.72□□□□□ -1.01
UBR3-211ENST00000487689 PCBP4P57723 403 aaKnown RBP8.72□□□□□ -1.01
UBR3-211ENST00000487689 VAC14Q08AM6 782 aa8.72□□□□□ -1.01
UBR3-211ENST00000487689 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
UBR3-211ENST00000487689 NBPF11Q86T75 865 aa8.72□□□□□ -1.01
UBR3-211ENST00000487689 KHNYNO15037 678 aaKnown RBP8.71□□□□□ -1.02
UBR3-211ENST00000487689 APBA3O96018 575 aa8.7□□□□□ -1.02
UBR3-211ENST00000487689 PRRT3Q5FWE3 981 aa8.7□□□□□ -1.02
UBR3-211ENST00000487689 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
UBR3-211ENST00000487689 AIDAQ96BJ3 306 aa8.7□□□□□ -1.02
UBR3-211ENST00000487689 PRR12Q9ULL5 1215 aa8.7□□□□□ -1.02
UBR3-211ENST00000487689 A0A1W2PNR3 127 aa8.69□□□□□ -1.02
UBR3-211ENST00000487689 SPDYE3A6NKU9 549 aa8.69□□□□□ -1.02
UBR3-211ENST00000487689 MAP7D1Q3KQU3 841 aa8.69□□□□□ -1.02
UBR3-211ENST00000487689 PRSS36Q5K4E3 855 aa8.69□□□□□ -1.02
UBR3-211ENST00000487689 ZNF468Q5VIY5 522 aaPredicted RBP8.69□□□□□ -1.02
UBR3-211ENST00000487689 RAD21O60216 631 aa8.68□□□□□ -1.02
UBR3-211ENST00000487689 IRF5Q13568 498 aa8.68□□□□□ -1.02
UBR3-211ENST00000487689 KRTAP9-9Q9BYP9 154 aa8.68□□□□□ -1.02
UBR3-211ENST00000487689 KRTAP9-4Q9BYQ2 154 aa8.68□□□□□ -1.02
UBR3-211ENST00000487689 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
UBR3-211ENST00000487689 ARSJQ5FYB0 599 aaPredicted RBP8.67□□□□□ -1.02
UBR3-211ENST00000487689 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
UBR3-211ENST00000487689 ELOA3DA6NLF2 546 aaPredicted RBP8.66□□□□□ -1.02
UBR3-211ENST00000487689 BTBD11A6QL63 1104 aa8.66□□□□□ -1.02
UBR3-211ENST00000487689 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
UBR3-211ENST00000487689 MCM6Q14566 821 aa8.66□□□□□ -1.02
UBR3-211ENST00000487689 ELOA3BQ3SY89 546 aa8.66□□□□□ -1.02
UBR3-211ENST00000487689 ELOA3Q8NG57 546 aa8.66□□□□□ -1.02
UBR3-211ENST00000487689 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
UBR3-211ENST00000487689 FAM157BP0CG42 384 aa8.65□□□□□ -1.02
UBR3-211ENST00000487689 PRKCSHP14314 528 aaPredicted RBP8.65□□□□□ -1.02
UBR3-211ENST00000487689 ALAS2P22557 587 aa8.64□□□□□ -1.03
UBR3-211ENST00000487689 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
UBR3-211ENST00000487689 STRN4Q9NRL3 753 aa8.64□□□□□ -1.03
UBR3-211ENST00000487689 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
UBR3-211ENST00000487689 PHTF2Q8N3S3 785 aa8.63□□□□□ -1.03
UBR3-211ENST00000487689 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
UBR3-211ENST00000487689 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
UBR3-211ENST00000487689 SCNN1DP51172 638 aa8.62□□□□□ -1.03
UBR3-211ENST00000487689 GDF10P55107 478 aa8.62□□□□□ -1.03
UBR3-211ENST00000487689 FLIIQ13045 1269 aa8.62□□□□□ -1.03
UBR3-211ENST00000487689 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
UBR3-211ENST00000487689 NACC1Q96RE7 527 aa8.62□□□□□ -1.03
UBR3-211ENST00000487689 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
UBR3-211ENST00000487689 M0R082 166 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 INHAP05111 366 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
UBR3-211ENST00000487689 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
UBR3-211ENST00000487689 LRP8Q14114 963 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 EML3Q32P44 896 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 SYT9Q86SS6 491 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 ZNF417Q8TAU3 575 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 ZNF587Q96SQ5 575 aaPredicted RBP8.61□□□□□ -1.03
UBR3-211ENST00000487689 MDFIQ99750 246 aa8.61□□□□□ -1.03
UBR3-211ENST00000487689 UBTFP17480 764 aaKnown RBP8.6□□□□□ -1.03
UBR3-211ENST00000487689 SMTNP53814 917 aa8.6□□□□□ -1.03
UBR3-211ENST00000487689 COL9A3Q14050 684 aaPredicted RBP8.6□□□□□ -1.03
UBR3-211ENST00000487689 GRIK4Q16099 956 aa8.6□□□□□ -1.03
UBR3-211ENST00000487689 EFSO43281 561 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms