RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 KRT32Q14532 448 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ARHGAP29Q52LW3 1261 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 GTF3C6Q969F1 213 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CCDC69A6NI79 296 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CALRP27797 417 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ARFGAP3Q9NP61 516 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 TRIM29Q14134 588 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 SKIDA1Q1XH10 827 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 TMC6Q7Z403 805 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 WDR7Q9Y4E6 1490 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CFAP100Q494V2 611 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CDK19Q9BWU1 502 aa17.9■□□□□ 0.46
HLA-DQB1-209ENST00000487676 IVLP07476 585 aa17.89■□□□□ 0.46
HLA-DQB1-209ENST00000487676 SYCP1Q15431 976 aa17.89■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CASQ1P31415 396 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 CCDC191Q8NCU4 936 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 PYCARDQ9ULZ3 195 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 AXDND1Q5T1B0 1012 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 IPO4Q8TEX9 1081 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 F6X3S4 739 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 ELF2Q15723 593 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 JAKMIP3Q5VZ66 844 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
HLA-DQB1-209ENST00000487676 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 CHMLP26374 656 aa17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 DDX54Q8TDD1 881 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 LRRFIP2Q9Y608 721 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 ZNF75DP51815 510 aa17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
HLA-DQB1-209ENST00000487676 AK2P54819 239 aa17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 DNAI1Q9UI46 699 aa17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 C10orf67Q8IYJ2 551 aa17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 DDX11Q96FC9 970 aa17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 FAM107BQ9H098 131 aa17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 JMYQ8N9B5 988 aa17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-209ENST00000487676 TAF7LQ5H9L4 462 aa17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 TEFQ10587 303 aa17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 LRRFIP1Q32MZ4 808 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 ADGBQ8N7X0 1667 aa17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 GOLGA6L9A6NEM1 432 aa17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 LTV1Q96GA3 475 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 TTLL5Q6EMB2 1281 aa17.86■□□□□ 0.45
HLA-DQB1-209ENST00000487676 DDIT3P35638 169 aa17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 KIAA0754O94854 1291 aa17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 SMARCE1Q969G3 411 aa17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 POTEB2H3BUK9 544 aa17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 CBX8Q9HC52 389 aa17.85■□□□□ 0.45
HLA-DQB1-209ENST00000487676 HDGFL1Q5TGJ6 251 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 GPATCH11Q8N954 259 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 CLASP1Q7Z460 1538 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 DHX16O60231 1041 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 SYT10Q6XYQ8 523 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 KRBA2Q6ZNG9 492 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 PPFIBP1Q86W92 1011 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 FILIP1LQ4L180 1135 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 MCM10Q7L590 875 aa17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 CCAR1Q8IX12 1150 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 ZNF215Q9UL58 517 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQB1-209ENST00000487676 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ZSCAN16Q9H4T2 348 aaPredicted RBP17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 PPIP5K1Q6PFW1 1433 aa17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 FYB1O15117 783 aa17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 KIF2CQ99661 725 aa17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 SPTLC3Q9NUV7 552 aa17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CAGE1Q8TC20 777 aa17.83■□□□□ 0.44
HLA-DQB1-209ENST00000487676 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 NUTM2FA1L443 756 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 SYNMO15061 1565 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 AACSQ86V21 672 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 GNG11P61952 73 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 LRMPQ12912 555 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 KLHL34Q8N239 644 aa17.82■□□□□ 0.44
HLA-DQB1-209ENST00000487676 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 DACH1Q9UI36 760 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 NOS1P29475 1434 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 PRDM15P57071 1507 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CUL4AQ13619 759 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 DUOX2Q9NRD8 1548 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 TRDNQ13061 729 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 EMILIN1Q9Y6C2 1016 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 FAM83GA6ND36 823 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 TERF2Q15554 542 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CAPN2P17655 700 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms