RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 CANXP27824 592 aaKnown RBP27.05■■□□□ 1.92
HDAC4-209ENST00000487617 PRKRIP1Q9H875 184 aaPredicted RBP27.05■■□□□ 1.92
HDAC4-209ENST00000487617 ZPR1O75312 459 aa27.04■■□□□ 1.92
HDAC4-209ENST00000487617 C4AP0C0L4 1744 aa27.03■■□□□ 1.92
HDAC4-209ENST00000487617 FKBP8Q14318 412 aa27.03■■□□□ 1.92
HDAC4-209ENST00000487617 TAF7Q15545 349 aaPredicted RBP27.03■■□□□ 1.92
HDAC4-209ENST00000487617 PARP3Q9Y6F1 533 aa27.03■■□□□ 1.92
HDAC4-209ENST00000487617 COL15A1P39059 1388 aa27.02■■□□□ 1.92
HDAC4-209ENST00000487617 USPL1Q5W0Q7 1092 aa27.01■■□□□ 1.91
HDAC4-209ENST00000487617 WDR43Q15061 677 aaKnown RBP eCLIP26.99■■□□□ 1.91
HDAC4-209ENST00000487617 NARFQ9UHQ1 456 aa26.99■■□□□ 1.91
HDAC4-209ENST00000487617 YBX3P16989 372 aaKnown RBP eCLIP26.98■■□□□ 1.91
HDAC4-209ENST00000487617 THUMPD2Q9BTF0 503 aaKnown RBP26.98■■□□□ 1.91
HDAC4-209ENST00000487617 MIS18AQ9NYP9 233 aa26.98■■□□□ 1.91
HDAC4-209ENST00000487617 A1BGP04217 495 aa26.97■■□□□ 1.91
HDAC4-209ENST00000487617 SNRPA1P09661 255 aaKnown RBP26.97■■□□□ 1.91
HDAC4-209ENST00000487617 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
HDAC4-209ENST00000487617 A0A087WZG4 1122 aa26.96■■□□□ 1.91
HDAC4-209ENST00000487617 PNISRQ8TF01 805 aaKnown RBP26.96■■□□□ 1.91
HDAC4-209ENST00000487617 ZNF330Q9Y3S2 320 aaPredicted RBP26.96■■□□□ 1.91
HDAC4-209ENST00000487617 USP16Q9Y5T5 823 aa26.96■■□□□ 1.91
HDAC4-209ENST00000487617 PRAMEF22A3QJZ6 481 aa26.95■■□□□ 1.9
HDAC4-209ENST00000487617 ZNF316A6NFI3 1004 aaPredicted RBP26.95■■□□□ 1.9
HDAC4-209ENST00000487617 GRIN3BO60391 1043 aa26.95■■□□□ 1.9
HDAC4-209ENST00000487617 RIPK4P57078 832 aa26.95■■□□□ 1.9
HDAC4-209ENST00000487617 DDR1Q08345 913 aa26.95■■□□□ 1.9
HDAC4-209ENST00000487617 CCDC146Q8IYE0 955 aa26.95■■□□□ 1.9
HDAC4-209ENST00000487617 WWC3Q9ULE0 1092 aa26.94■■□□□ 1.9
HDAC4-209ENST00000487617 C10orf71Q711Q0 1435 aa26.93■■□□□ 1.9
HDAC4-209ENST00000487617 DLG5Q8TDM6 1919 aa26.93■■□□□ 1.9
HDAC4-209ENST00000487617 TM4SF1P30408 202 aa26.93■■□□□ 1.9
HDAC4-209ENST00000487617 IL6STP40189 918 aaPredicted RBP26.93■■□□□ 1.9
HDAC4-209ENST00000487617 TMPOP42166 694 aaKnown RBP26.93■■□□□ 1.9
HDAC4-209ENST00000487617 NPM2Q86SE8 214 aaKnown RBP26.93■■□□□ 1.9
HDAC4-209ENST00000487617 POLRMTO00411 1230 aaKnown RBP26.92■■□□□ 1.9
HDAC4-209ENST00000487617 TGFB2P61812 414 aa26.92■■□□□ 1.9
HDAC4-209ENST00000487617 BCL2L12Q9HB09 334 aa26.92■■□□□ 1.9
HDAC4-209ENST00000487617 ADAMTS8Q9UP79 889 aa26.92■■□□□ 1.9
HDAC4-209ENST00000487617 NFIXQ14938 502 aa26.91■■□□□ 1.9
HDAC4-209ENST00000487617 LMOD3Q0VAK6 560 aa26.9■■□□□ 1.9
HDAC4-209ENST00000487617 RUNDC1Q96C34 613 aa26.9■■□□□ 1.9
HDAC4-209ENST00000487617 TBC1D2BQ9UPU7 963 aa26.9■■□□□ 1.9
HDAC4-209ENST00000487617 RRP7AQ9Y3A4 280 aaKnown RBP26.9■■□□□ 1.9
HDAC4-209ENST00000487617 PXDNLA1KZ92 1463 aa26.89■■□□□ 1.9
HDAC4-209ENST00000487617 PIP4K2AP48426 406 aaPredicted RBP26.89■■□□□ 1.9
HDAC4-209ENST00000487617 A0A0G2JLW4 131 aa26.88■■□□□ 1.89
HDAC4-209ENST00000487617 NEUROD2Q15784 382 aa26.88■■□□□ 1.89
HDAC4-209ENST00000487617 DPEP1P16444 411 aa26.86■■□□□ 1.89
HDAC4-209ENST00000487617 EIF4A1P60842 406 aaKnown RBP26.86■■□□□ 1.89
HDAC4-209ENST00000487617 BICDL1Q6ZP65 573 aa26.86■■□□□ 1.89
HDAC4-209ENST00000487617 KIF13BQ9NQT8 1826 aa26.86■■□□□ 1.89
HDAC4-209ENST00000487617 DZIP3Q86Y13 1208 aaKnown RBP26.85■■□□□ 1.89
HDAC4-209ENST00000487617 TSPYL4Q9UJ04 414 aa26.85■■□□□ 1.89
HDAC4-209ENST00000487617 UTRNP46939 3433 aa26.84■■□□□ 1.89
HDAC4-209ENST00000487617 SERPINB2P05120 415 aa26.84■■□□□ 1.89
HDAC4-209ENST00000487617 GIGYF1O75420 1035 aaPredicted RBP26.83■■□□□ 1.89
HDAC4-209ENST00000487617 CAMTA2O94983 1202 aa26.83■■□□□ 1.89
HDAC4-209ENST00000487617 TBC1D9BQ66K14 1250 aa26.83■■□□□ 1.89
HDAC4-209ENST00000487617 KDM3BQ7LBC6 1761 aa26.82■■□□□ 1.88
HDAC4-209ENST00000487617 NBPF26B4DH59 902 aa26.82■■□□□ 1.88
HDAC4-209ENST00000487617 NBPF10Q6P3W6 841 aaKnown RBP26.82■■□□□ 1.88
HDAC4-209ENST00000487617 NBPF15Q8N660 670 aa26.82■■□□□ 1.88
HDAC4-209ENST00000487617 CHD4Q14839 1912 aa26.82■■□□□ 1.88
HDAC4-209ENST00000487617 BCS1LQ9Y276 419 aa26.81■■□□□ 1.88
HDAC4-209ENST00000487617 ZNF784Q8NCA9 323 aaPredicted RBP26.8■■□□□ 1.88
HDAC4-209ENST00000487617 BABAM1Q9NWV8 329 aa26.8■■□□□ 1.88
HDAC4-209ENST00000487617 KIAA1551Q9HCM1 1747 aa26.79■■□□□ 1.88
HDAC4-209ENST00000487617 N4BP2Q86UW6 1770 aaPredicted RBP26.79■■□□□ 1.88
HDAC4-209ENST00000487617 KCNA3P22001 575 aa26.79■■□□□ 1.88
HDAC4-209ENST00000487617 TRIM35Q9UPQ4 493 aa26.79■■□□□ 1.88
HDAC4-209ENST00000487617 CHRNA5P30532 468 aa26.78■■□□□ 1.88
HDAC4-209ENST00000487617 SCN7AQ01118 1682 aa26.78■■□□□ 1.88
HDAC4-209ENST00000487617 GOLGB1Q14789 3259 aaKnown RBP26.78■■□□□ 1.88
HDAC4-209ENST00000487617 SETDB2Q96T68 719 aa26.77■■□□□ 1.88
HDAC4-209ENST00000487617 PIM2Q9P1W9 311 aa26.77■■□□□ 1.88
HDAC4-209ENST00000487617 ANP32CO43423 234 aa26.76■■□□□ 1.87
HDAC4-209ENST00000487617 CCDC184Q52MB2 194 aa26.76■■□□□ 1.87
HDAC4-209ENST00000487617 CARMIL3Q8ND23 1372 aa26.75■■□□□ 1.87
HDAC4-209ENST00000487617 ZNF652Q9Y2D9 606 aa26.75■■□□□ 1.87
HDAC4-209ENST00000487617 LAS1LQ9Y4W2 734 aaKnown RBP26.75■■□□□ 1.87
HDAC4-209ENST00000487617 APAF1O14727 1248 aa26.74■■□□□ 1.87
HDAC4-209ENST00000487617 CLEC4GQ6UXB4 293 aa26.74■■□□□ 1.87
HDAC4-209ENST00000487617 NGEFQ8N5V2 710 aa26.74■■□□□ 1.87
HDAC4-209ENST00000487617 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
HDAC4-209ENST00000487617 DALRD3Q5D0E6 543 aaKnown RBP26.73■■□□□ 1.87
HDAC4-209ENST00000487617 NRXN2Q9P2S2 1712 aa26.73■■□□□ 1.87
HDAC4-209ENST00000487617 AFDNP55196 1824 aaKnown RBP26.72■■□□□ 1.87
HDAC4-209ENST00000487617 CHL1O00533 1208 aa26.72■■□□□ 1.87
HDAC4-209ENST00000487617 NPHP1O15259 732 aa26.72■■□□□ 1.87
HDAC4-209ENST00000487617 MYL6BP14649 208 aa26.71■■□□□ 1.87
HDAC4-209ENST00000487617 PRR5LQ6MZQ0 368 aa26.71■■□□□ 1.87
HDAC4-209ENST00000487617 EIF2S2P20042 333 aaKnown RBP26.7■■□□□ 1.86
HDAC4-209ENST00000487617 ARHGAP27Q6ZUM4 889 aa26.7■■□□□ 1.86
HDAC4-209ENST00000487617 C2CD5Q86YS7 1000 aa26.7■■□□□ 1.86
HDAC4-209ENST00000487617 CCDC24Q8N4L8 307 aa26.7■■□□□ 1.86
HDAC4-209ENST00000487617 CNBD1Q8NA66 436 aa26.7■■□□□ 1.86
HDAC4-209ENST00000487617 BCORQ6W2J9 1755 aa26.7■■□□□ 1.86
HDAC4-209ENST00000487617 ERBB4Q15303 1308 aa26.69■■□□□ 1.86
HDAC4-209ENST00000487617 RGL2O15211 777 aa26.69■■□□□ 1.86
HDAC4-209ENST00000487617 H0YIN7 160 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms