RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 PHKG2P15735 406 aa17.45■□□□□ 0.38
SGIP1-212ENST00000487507 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
SGIP1-212ENST00000487507 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
SGIP1-212ENST00000487507 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
SGIP1-212ENST00000487507 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
SGIP1-212ENST00000487507 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
SGIP1-212ENST00000487507 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
SGIP1-212ENST00000487507 GRM1Q13255 1194 aa17.43■□□□□ 0.38
SGIP1-212ENST00000487507 EAPPQ56P03 285 aaPredicted RBP17.43■□□□□ 0.38
SGIP1-212ENST00000487507 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
SGIP1-212ENST00000487507 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
SGIP1-212ENST00000487507 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
SGIP1-212ENST00000487507 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
SGIP1-212ENST00000487507 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
SGIP1-212ENST00000487507 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
SGIP1-212ENST00000487507 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
SGIP1-212ENST00000487507 TM4SF1P30408 202 aa17.41■□□□□ 0.38
SGIP1-212ENST00000487507 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
SGIP1-212ENST00000487507 LDHDQ86WU2 507 aa17.41■□□□□ 0.38
SGIP1-212ENST00000487507 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
SGIP1-212ENST00000487507 CLEC11AQ9Y240 323 aa17.41■□□□□ 0.38
SGIP1-212ENST00000487507 EMILIN1Q9Y6C2 1016 aa17.41■□□□□ 0.38
SGIP1-212ENST00000487507 FYB1O15117 783 aa17.4■□□□□ 0.38
SGIP1-212ENST00000487507 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
SGIP1-212ENST00000487507 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
SGIP1-212ENST00000487507 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
SGIP1-212ENST00000487507 C21orf2O43822 256 aa17.39■□□□□ 0.37
SGIP1-212ENST00000487507 ZPR1O75312 459 aa17.39■□□□□ 0.37
SGIP1-212ENST00000487507 ITGBL1O95965 494 aaPredicted RBP17.39■□□□□ 0.37
SGIP1-212ENST00000487507 CARMIL3Q8ND23 1372 aa17.39■□□□□ 0.37
SGIP1-212ENST00000487507 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
SGIP1-212ENST00000487507 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
SGIP1-212ENST00000487507 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
SGIP1-212ENST00000487507 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
SGIP1-212ENST00000487507 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
SGIP1-212ENST00000487507 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
SGIP1-212ENST00000487507 THSD7BQ9C0I4 1608 aa17.37■□□□□ 0.37
SGIP1-212ENST00000487507 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
SGIP1-212ENST00000487507 H0YIN7 160 aa17.37■□□□□ 0.37
SGIP1-212ENST00000487507 NFIXQ14938 502 aa17.37■□□□□ 0.37
SGIP1-212ENST00000487507 MCOLN1Q9GZU1 580 aa17.37■□□□□ 0.37
SGIP1-212ENST00000487507 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
SGIP1-212ENST00000487507 ADAMTSL1Q8N6G6 1762 aa17.36■□□□□ 0.37
SGIP1-212ENST00000487507 TRPM7Q96QT4 1865 aa17.36■□□□□ 0.37
SGIP1-212ENST00000487507 SERPINB2P05120 415 aa17.36■□□□□ 0.37
SGIP1-212ENST00000487507 EYA1Q99502 592 aa17.36■□□□□ 0.37
SGIP1-212ENST00000487507 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
SGIP1-212ENST00000487507 IQCA1LA6NCM1 817 aa17.35■□□□□ 0.37
SGIP1-212ENST00000487507 CABP4P57796 275 aa17.35■□□□□ 0.37
SGIP1-212ENST00000487507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.37
SGIP1-212ENST00000487507 MAP1SQ66K74 1059 aaPredicted RBP17.34■□□□□ 0.37
SGIP1-212ENST00000487507 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
SGIP1-212ENST00000487507 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
SGIP1-212ENST00000487507 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
SGIP1-212ENST00000487507 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
SGIP1-212ENST00000487507 BICDL1Q6ZP65 573 aa17.33■□□□□ 0.36
SGIP1-212ENST00000487507 TAOK3Q9H2K8 898 aa17.33■□□□□ 0.36
SGIP1-212ENST00000487507 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
SGIP1-212ENST00000487507 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
SGIP1-212ENST00000487507 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
SGIP1-212ENST00000487507 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
SGIP1-212ENST00000487507 CAPNS2Q96L46 248 aa17.31■□□□□ 0.36
SGIP1-212ENST00000487507 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
SGIP1-212ENST00000487507 DGKZQ13574 1117 aa17.3■□□□□ 0.36
SGIP1-212ENST00000487507 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
SGIP1-212ENST00000487507 EPHX2P34913 555 aa17.29■□□□□ 0.36
SGIP1-212ENST00000487507 SOX10P56693 466 aa17.29■□□□□ 0.36
SGIP1-212ENST00000487507 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
SGIP1-212ENST00000487507 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
SGIP1-212ENST00000487507 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
SGIP1-212ENST00000487507 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
SGIP1-212ENST00000487507 AOC2O75106 756 aa17.28■□□□□ 0.36
SGIP1-212ENST00000487507 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
SGIP1-212ENST00000487507 L3MBTL3Q96JM7 780 aaPredicted RBP17.28■□□□□ 0.36
SGIP1-212ENST00000487507 COL15A1P39059 1388 aa17.28■□□□□ 0.36
SGIP1-212ENST00000487507 SOS1Q07889 1333 aaPredicted RBP17.27■□□□□ 0.36
SGIP1-212ENST00000487507 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
SGIP1-212ENST00000487507 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
SGIP1-212ENST00000487507 BCL2L12Q9HB09 334 aa17.27■□□□□ 0.36
SGIP1-212ENST00000487507 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
SGIP1-212ENST00000487507 LTBP3Q9NS15 1303 aa17.26■□□□□ 0.35
SGIP1-212ENST00000487507 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
SGIP1-212ENST00000487507 ECE1P42892 770 aa17.26■□□□□ 0.35
SGIP1-212ENST00000487507 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
SGIP1-212ENST00000487507 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
SGIP1-212ENST00000487507 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
SGIP1-212ENST00000487507 MTHFSP49914 203 aa17.24■□□□□ 0.35
SGIP1-212ENST00000487507 TESK2Q96S53 571 aa17.24■□□□□ 0.35
SGIP1-212ENST00000487507 WASHC2AQ641Q2 1341 aa17.23■□□□□ 0.35
SGIP1-212ENST00000487507 PDE6BP35913 854 aa17.23■□□□□ 0.35
SGIP1-212ENST00000487507 PRPF38BQ5VTL8 546 aaKnown RBP17.23■□□□□ 0.35
SGIP1-212ENST00000487507 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
SGIP1-212ENST00000487507 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
SGIP1-212ENST00000487507 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
SGIP1-212ENST00000487507 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
SGIP1-212ENST00000487507 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
SGIP1-212ENST00000487507 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
SGIP1-212ENST00000487507 SCN7AQ01118 1682 aa17.2■□□□□ 0.34
SGIP1-212ENST00000487507 TRAF5O00463 557 aa17.2■□□□□ 0.34
SGIP1-212ENST00000487507 NPHP1O15259 732 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms