RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 MCM10Q7L590 875 aa13.58□□□□□ -0.24
RNF220-215ENST00000487332 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
RNF220-215ENST00000487332 WDR43Q15061 677 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNF220-215ENST00000487332 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
RNF220-215ENST00000487332 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
RNF220-215ENST00000487332 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
RNF220-215ENST00000487332 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
RNF220-215ENST00000487332 MMP10P09238 476 aa13.55□□□□□ -0.24
RNF220-215ENST00000487332 IL6STP40189 918 aaPredicted RBP13.55□□□□□ -0.24
RNF220-215ENST00000487332 EIF5P55010 431 aaKnown RBP13.55□□□□□ -0.24
RNF220-215ENST00000487332 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
RNF220-215ENST00000487332 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
RNF220-215ENST00000487332 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
RNF220-215ENST00000487332 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
RNF220-215ENST00000487332 A0A087WZG4 1122 aa13.54□□□□□ -0.24
RNF220-215ENST00000487332 RGL2O15211 777 aa13.54□□□□□ -0.24
RNF220-215ENST00000487332 SNRPA1P09661 255 aaKnown RBP13.54□□□□□ -0.24
RNF220-215ENST00000487332 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
RNF220-215ENST00000487332 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
RNF220-215ENST00000487332 KCNQ3O43525 872 aa13.53□□□□□ -0.24
RNF220-215ENST00000487332 NLGN2Q8NFZ4 835 aa13.53□□□□□ -0.24
RNF220-215ENST00000487332 PXDNLA1KZ92 1463 aa13.53□□□□□ -0.24
RNF220-215ENST00000487332 ZPR1O75312 459 aa13.52□□□□□ -0.25
RNF220-215ENST00000487332 ADAMTS8Q9UP79 889 aa13.52□□□□□ -0.25
RNF220-215ENST00000487332 TM4SF1P30408 202 aa13.51□□□□□ -0.25
RNF220-215ENST00000487332 RIPK4P57078 832 aa13.51□□□□□ -0.25
RNF220-215ENST00000487332 TGFB2P61812 414 aa13.51□□□□□ -0.25
RNF220-215ENST00000487332 FKBP8Q14318 412 aa13.51□□□□□ -0.25
RNF220-215ENST00000487332 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
RNF220-215ENST00000487332 SRP68Q9UHB9 627 aaKnown RBP13.51□□□□□ -0.25
RNF220-215ENST00000487332 PARP3Q9Y6F1 533 aa13.51□□□□□ -0.25
RNF220-215ENST00000487332 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
RNF220-215ENST00000487332 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
RNF220-215ENST00000487332 USPL1Q5W0Q7 1092 aa13.5□□□□□ -0.25
RNF220-215ENST00000487332 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
RNF220-215ENST00000487332 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
RNF220-215ENST00000487332 DDR1Q08345 913 aa13.49□□□□□ -0.25
RNF220-215ENST00000487332 BCL2L12Q9HB09 334 aa13.49□□□□□ -0.25
RNF220-215ENST00000487332 ANP32CO43423 234 aa13.48□□□□□ -0.25
RNF220-215ENST00000487332 GRIN3BO60391 1043 aa13.48□□□□□ -0.25
RNF220-215ENST00000487332 GIGYF1O75420 1035 aaPredicted RBP13.48□□□□□ -0.25
RNF220-215ENST00000487332 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
RNF220-215ENST00000487332 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
RNF220-215ENST00000487332 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
RNF220-215ENST00000487332 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
RNF220-215ENST00000487332 BRCA1P38398 1863 aaKnown RBP13.47□□□□□ -0.25
RNF220-215ENST00000487332 PRAMEF22A3QJZ6 481 aa13.47□□□□□ -0.25
RNF220-215ENST00000487332 CAMTA2O94983 1202 aa13.47□□□□□ -0.25
RNF220-215ENST00000487332 A1BGP04217 495 aa13.47□□□□□ -0.25
RNF220-215ENST00000487332 GPR162Q16538 588 aa13.47□□□□□ -0.25
RNF220-215ENST00000487332 CCDC146Q8IYE0 955 aa13.47□□□□□ -0.25
RNF220-215ENST00000487332 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
RNF220-215ENST00000487332 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
RNF220-215ENST00000487332 NFIXQ14938 502 aa13.46□□□□□ -0.25
RNF220-215ENST00000487332 CLEC4GQ6UXB4 293 aa13.46□□□□□ -0.25
RNF220-215ENST00000487332 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.25
RNF220-215ENST00000487332 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
RNF220-215ENST00000487332 CHL1O00533 1208 aa13.45□□□□□ -0.26
RNF220-215ENST00000487332 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNF220-215ENST00000487332 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
RNF220-215ENST00000487332 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
RNF220-215ENST00000487332 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
RNF220-215ENST00000487332 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
RNF220-215ENST00000487332 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
RNF220-215ENST00000487332 HOXB7P09629 217 aa13.44□□□□□ -0.26
RNF220-215ENST00000487332 YY1P25490 414 aa13.44□□□□□ -0.26
RNF220-215ENST00000487332 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
RNF220-215ENST00000487332 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
RNF220-215ENST00000487332 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
RNF220-215ENST00000487332 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
RNF220-215ENST00000487332 N4BP2Q86UW6 1770 aaPredicted RBP13.43□□□□□ -0.26
RNF220-215ENST00000487332 SERPINB2P05120 415 aa13.43□□□□□ -0.26
RNF220-215ENST00000487332 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
RNF220-215ENST00000487332 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
RNF220-215ENST00000487332 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
RNF220-215ENST00000487332 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
RNF220-215ENST00000487332 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
RNF220-215ENST00000487332 CHD4Q14839 1912 aa13.43□□□□□ -0.26
RNF220-215ENST00000487332 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 APAF1O14727 1248 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 ZNF853P0CG23 659 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
RNF220-215ENST00000487332 RIC1Q4ADV7 1423 aa13.41□□□□□ -0.26
RNF220-215ENST00000487332 ERVV-1B6SEH8 477 aa13.41□□□□□ -0.26
RNF220-215ENST00000487332 KCNA3P22001 575 aa13.41□□□□□ -0.26
RNF220-215ENST00000487332 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
RNF220-215ENST00000487332 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
RNF220-215ENST00000487332 DPEP1P16444 411 aa13.4□□□□□ -0.26
RNF220-215ENST00000487332 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
RNF220-215ENST00000487332 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
RNF220-215ENST00000487332 ADCY9O60503 1353 aa13.4□□□□□ -0.26
RNF220-215ENST00000487332 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
RNF220-215ENST00000487332 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
RNF220-215ENST00000487332 GNAI1P63096 354 aa13.39□□□□□ -0.27
RNF220-215ENST00000487332 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
RNF220-215ENST00000487332 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms