RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 POLA2Q14181 598 aa31.95■■■□□ 2.71
HLA-C-208ENST00000487245 BEND3Q5T5X7 828 aa31.95■■■□□ 2.71
HLA-C-208ENST00000487245 PXDNQ92626 1479 aa31.95■■■□□ 2.71
HLA-C-208ENST00000487245 GOLGA6L22H0YM25 854 aa31.95■■■□□ 2.7
HLA-C-208ENST00000487245 CYP2E1P05181 493 aaPredicted RBP31.95■■■□□ 2.7
HLA-C-208ENST00000487245 AXIN2Q9Y2T1 843 aa31.95■■■□□ 2.7
HLA-C-208ENST00000487245 HEG1Q9ULI3 1381 aa31.94■■■□□ 2.7
HLA-C-208ENST00000487245 GRPEL1Q9HAV7 217 aa31.94■■■□□ 2.7
HLA-C-208ENST00000487245 ADAMTS7Q9UKP4 1686 aa31.93■■■□□ 2.7
HLA-C-208ENST00000487245 PI4KAP2A4QPH2 592 aa31.93■■■□□ 2.7
HLA-C-208ENST00000487245 PI4KAP1Q8N8J0 262 aa31.93■■■□□ 2.7
HLA-C-208ENST00000487245 HDAC5Q9UQL6 1122 aa31.93■■■□□ 2.7
HLA-C-208ENST00000487245 ERBB3P21860 1342 aa31.92■■■□□ 2.7
HLA-C-208ENST00000487245 GIGYF1O75420 1035 aaPredicted RBP31.91■■■□□ 2.7
HLA-C-208ENST00000487245 BAG4O95429 457 aaKnown RBP31.91■■■□□ 2.7
HLA-C-208ENST00000487245 PPP1R42Q7Z4L9 355 aa31.91■■■□□ 2.7
HLA-C-208ENST00000487245 SIPA1L3O60292 1781 aaPredicted RBP31.9■■■□□ 2.7
HLA-C-208ENST00000487245 ALDH1L1O75891 902 aa31.89■■■□□ 2.7
HLA-C-208ENST00000487245 HSP90AB4PQ58FF6 505 aa31.89■■■□□ 2.7
HLA-C-208ENST00000487245 PLEKHG2Q9H7P9 1386 aa31.89■■■□□ 2.7
HLA-C-208ENST00000487245 PLEKHG5O94827 1062 aa31.89■■■□□ 2.69
HLA-C-208ENST00000487245 IL17RAQ96F46 866 aa31.89■■■□□ 2.69
HLA-C-208ENST00000487245 ADCY9O60503 1353 aa31.88■■■□□ 2.69
HLA-C-208ENST00000487245 RAPGEF4Q8WZA2 1011 aa31.87■■■□□ 2.69
HLA-C-208ENST00000487245 PANK2Q9BZ23 570 aa31.87■■■□□ 2.69
HLA-C-208ENST00000487245 HYPKQ9NX55 129 aa31.87■■■□□ 2.69
HLA-C-208ENST00000487245 ABCC6O95255 1503 aa31.87■■■□□ 2.69
HLA-C-208ENST00000487245 RGPD5Q99666 1765 aa31.87■■■□□ 2.69
HLA-C-208ENST00000487245 KLHL40Q2TBA0 621 aa31.86■■■□□ 2.69
HLA-C-208ENST00000487245 ESYT1Q9BSJ8 1104 aa31.86■■■□□ 2.69
HLA-C-208ENST00000487245 TMEM94Q12767 1356 aa31.86■■■□□ 2.69
HLA-C-208ENST00000487245 EPB41L2O43491 1005 aaKnown RBP31.86■■■□□ 2.69
HLA-C-208ENST00000487245 SURF6O75683 361 aaKnown RBP31.86■■■□□ 2.69
HLA-C-208ENST00000487245 ZC3H6P61129 1189 aaKnown RBP31.86■■■□□ 2.69
HLA-C-208ENST00000487245 KIF1BPQ96EK5 621 aa31.86■■■□□ 2.69
HLA-C-208ENST00000487245 KSR2Q6VAB6 950 aa31.85■■■□□ 2.69
HLA-C-208ENST00000487245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.85■■■□□ 2.69
HLA-C-208ENST00000487245 AK9Q5TCS8 1911 aa31.84■■■□□ 2.69
HLA-C-208ENST00000487245 SRGAP3O43295 1099 aa31.84■■■□□ 2.69
HLA-C-208ENST00000487245 MCM2P49736 904 aa31.84■■■□□ 2.69
HLA-C-208ENST00000487245 ANAPC15P60006 121 aa31.84■■■□□ 2.69
HLA-C-208ENST00000487245 NBPF7P0C2Y1 421 aaPredicted RBP31.83■■■□□ 2.69
HLA-C-208ENST00000487245 TATP17735 454 aaPredicted RBP31.83■■■□□ 2.69
HLA-C-208ENST00000487245 RHPN1Q8TCX5 695 aa31.83■■■□□ 2.69
HLA-C-208ENST00000487245 SPG7Q9UQ90 795 aa31.83■■■□□ 2.69
HLA-C-208ENST00000487245 MCCP23508 829 aa31.82■■■□□ 2.69
HLA-C-208ENST00000487245 MTX1Q13505 466 aa31.82■■■□□ 2.69
HLA-C-208ENST00000487245 CADPS2Q86UW7 1296 aa31.82■■■□□ 2.69
HLA-C-208ENST00000487245 NPHP3Q7Z494 1330 aa31.82■■■□□ 2.68
HLA-C-208ENST00000487245 TRIM6-TRIM34B2RNG4 842 aa31.82■■■□□ 2.68
HLA-C-208ENST00000487245 CHMLP26374 656 aa31.82■■■□□ 2.68
HLA-C-208ENST00000487245 RRAGDQ9NQL2 400 aaPredicted RBP31.82■■■□□ 2.68
HLA-C-208ENST00000487245 DDX58O95786 925 aaKnown RBP31.81■■■□□ 2.68
HLA-C-208ENST00000487245 ANXA1P04083 346 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 RILPL2Q969X0 211 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 NLRP2Q9NX02 1062 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 MAP3K2Q9Y2U5 619 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 TSHZ3Q63HK5 1081 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 GAS2L3Q86XJ1 694 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 ARXQ96QS3 562 aa31.8■■■□□ 2.68
HLA-C-208ENST00000487245 DDX21Q9NR30 783 aaKnown RBP eCLIP31.8■■■□□ 2.68
HLA-C-208ENST00000487245 KDM4FA0A1W2PPD8 638 aa31.79■■■□□ 2.68
HLA-C-208ENST00000487245 COL18A1P39060 1754 aa31.78■■■□□ 2.68
HLA-C-208ENST00000487245 IL1RAPL2Q9NP60 686 aa31.78■■■□□ 2.68
HLA-C-208ENST00000487245 C9orf78Q9NZ63 289 aaPredicted RBP31.78■■■□□ 2.68
HLA-C-208ENST00000487245 SLC52A2Q9HAB3 445 aa31.77■■■□□ 2.68
HLA-C-208ENST00000487245 SCN11AQ9UI33 1791 aa31.77■■■□□ 2.68
HLA-C-208ENST00000487245 TNS3Q68CZ2 1445 aa31.77■■■□□ 2.68
HLA-C-208ENST00000487245 STRCP1A6NGW2 1772 aa31.75■■■□□ 2.67
HLA-C-208ENST00000487245 PHKG2P15735 406 aa31.75■■■□□ 2.67
HLA-C-208ENST00000487245 LINS1Q8NG48 757 aa31.75■■■□□ 2.67
HLA-C-208ENST00000487245 DDX49Q9Y6V7 483 aaKnown RBP31.75■■■□□ 2.67
HLA-C-208ENST00000487245 PROSER3Q2NL68 480 aa31.74■■■□□ 2.67
HLA-C-208ENST00000487245 ZNF790Q6PG37 636 aa31.74■■■□□ 2.67
HLA-C-208ENST00000487245 IFNL2Q8IZJ0 200 aa31.74■■■□□ 2.67
HLA-C-208ENST00000487245 LMBRD1Q9NUN5 540 aa31.74■■■□□ 2.67
HLA-C-208ENST00000487245 CUL4AQ13619 759 aa31.74■■■□□ 2.67
HLA-C-208ENST00000487245 NUTM1Q86Y26 1132 aa31.74■■■□□ 2.67
HLA-C-208ENST00000487245 USP42Q9H9J4 1324 aaKnown RBP31.74■■■□□ 2.67
HLA-C-208ENST00000487245 CRYBG1Q9Y4K1 1723 aa31.73■■■□□ 2.67
HLA-C-208ENST00000487245 ERC1Q8IUD2 1116 aa31.73■■■□□ 2.67
HLA-C-208ENST00000487245 ZGPATQ8N5A5 531 aaKnown RBP31.73■■■□□ 2.67
HLA-C-208ENST00000487245 UTYO14607 1347 aa31.72■■■□□ 2.67
HLA-C-208ENST00000487245 CSB-PGBD3P0DP91 1061 aa31.72■■■□□ 2.67
HLA-C-208ENST00000487245 NEK4P51957 841 aa31.72■■■□□ 2.67
HLA-C-208ENST00000487245 ZNF445P59923 1031 aa31.72■■■□□ 2.67
HLA-C-208ENST00000487245 PI4K2BQ8TCG2 481 aa31.72■■■□□ 2.67
HLA-C-208ENST00000487245 ZDHHC9Q9Y397 364 aa31.72■■■□□ 2.67
HLA-C-208ENST00000487245 KDM6AO15550 1401 aaPredicted RBP31.71■■■□□ 2.67
HLA-C-208ENST00000487245 TTC41PQ6P2S7 1318 aa31.71■■■□□ 2.67
HLA-C-208ENST00000487245 MCTP1Q6DN14 999 aa31.71■■■□□ 2.67
HLA-C-208ENST00000487245 TMX3Q96JJ7 454 aa31.7■■■□□ 2.67
HLA-C-208ENST00000487245 OS9Q13438 667 aaPredicted RBP31.69■■■□□ 2.66
HLA-C-208ENST00000487245 PKP1Q13835 747 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 INTS4Q96HW7 963 aaKnown RBP31.69■■■□□ 2.66
HLA-C-208ENST00000487245 ANO2Q9NQ90 1003 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 CPDO75976 1380 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 SPATA31A3Q5VYP0 1347 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 PRAMEF22A3QJZ6 481 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 PDIA6Q15084 440 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms