RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
CCNB3-206ENST00000487204 INTS3Q68E01 1043 aaKnown RBP9.12□□□□□ -0.95
CCNB3-206ENST00000487204 HYPKQ9NX55 129 aa9.12□□□□□ -0.95
CCNB3-206ENST00000487204 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
CCNB3-206ENST00000487204 WNK3Q9BYP7 1800 aa9.11□□□□□ -0.95
CCNB3-206ENST00000487204 DDX58O95786 925 aaKnown RBP9.11□□□□□ -0.95
CCNB3-206ENST00000487204 RLBP1P12271 317 aa9.11□□□□□ -0.95
CCNB3-206ENST00000487204 FLIIQ13045 1269 aa9.11□□□□□ -0.95
CCNB3-206ENST00000487204 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
CCNB3-206ENST00000487204 CENPQQ7L2Z9 268 aaPredicted RBP9.11□□□□□ -0.95
CCNB3-206ENST00000487204 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
CCNB3-206ENST00000487204 CACNA1FO60840 1977 aa9.11□□□□□ -0.95
CCNB3-206ENST00000487204 KCNQ3O43525 872 aa9.1□□□□□ -0.95
CCNB3-206ENST00000487204 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
CCNB3-206ENST00000487204 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
CCNB3-206ENST00000487204 TMEM57Q8N5G2 664 aa9.1□□□□□ -0.95
CCNB3-206ENST00000487204 ZNF496Q96IT1 587 aaPredicted RBP9.1□□□□□ -0.95
CCNB3-206ENST00000487204 RWDD1Q9H446 243 aaPredicted RBP9.1□□□□□ -0.95
CCNB3-206ENST00000487204 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCNB3-206ENST00000487204 HDAC5Q9UQL6 1122 aa9.1□□□□□ -0.95
CCNB3-206ENST00000487204 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
CCNB3-206ENST00000487204 PXDNLA1KZ92 1463 aa9.09□□□□□ -0.95
CCNB3-206ENST00000487204 AFF2P51816 1311 aa9.09□□□□□ -0.95
CCNB3-206ENST00000487204 SHANK3Q9BYB0 1731 aa9.09□□□□□ -0.95
CCNB3-206ENST00000487204 TCERG1O14776 1098 aaKnown RBP9.09□□□□□ -0.95
CCNB3-206ENST00000487204 SLC39A6Q13433 755 aa9.09□□□□□ -0.95
CCNB3-206ENST00000487204 GJD4Q96KN9 370 aaPredicted RBP9.09□□□□□ -0.95
CCNB3-206ENST00000487204 ZBTB40Q9NUA8 1239 aa9.09□□□□□ -0.95
CCNB3-206ENST00000487204 CHPF2Q9P2E5 772 aa9.09□□□□□ -0.95
CCNB3-206ENST00000487204 BCL9O00512 1426 aa9.08□□□□□ -0.96
CCNB3-206ENST00000487204 ATRNO75882 1429 aa9.08□□□□□ -0.96
CCNB3-206ENST00000487204 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
CCNB3-206ENST00000487204 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
CCNB3-206ENST00000487204 STARD3NLO95772 234 aa9.08□□□□□ -0.96
CCNB3-206ENST00000487204 HMGB2P26583 209 aaKnown RBP9.08□□□□□ -0.96
CCNB3-206ENST00000487204 FAM98CQ17RN3 349 aaKnown RBP9.08□□□□□ -0.96
CCNB3-206ENST00000487204 ZNF772Q68DY9 489 aaPredicted RBP9.08□□□□□ -0.96
CCNB3-206ENST00000487204 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
CCNB3-206ENST00000487204 A0A0G2JS52 829 aa9.07□□□□□ -0.96
CCNB3-206ENST00000487204 GNAI3P08754 354 aa9.07□□□□□ -0.96
CCNB3-206ENST00000487204 MYT1Q01538 1121 aa9.07□□□□□ -0.96
CCNB3-206ENST00000487204 PIGBQ92521 554 aa9.07□□□□□ -0.96
CCNB3-206ENST00000487204 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
CCNB3-206ENST00000487204 IBTKQ9P2D0 1353 aaPredicted RBP9.07□□□□□ -0.96
CCNB3-206ENST00000487204 RGS12O14924 1447 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 PAPPAQ13219 1627 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 PRIM1P49642 420 aaKnown RBP9.06□□□□□ -0.96
CCNB3-206ENST00000487204 HDAC1Q13547 482 aaPredicted RBP9.06□□□□□ -0.96
CCNB3-206ENST00000487204 KSR2Q6VAB6 950 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 G2E3Q7L622 706 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 MARCH10Q8NA82 808 aaPredicted RBP9.06□□□□□ -0.96
CCNB3-206ENST00000487204 DNAAF4Q8WXU2 420 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 SYTL4Q96C24 671 aaPredicted RBP9.06□□□□□ -0.96
CCNB3-206ENST00000487204 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
CCNB3-206ENST00000487204 ATG3Q9NT62 314 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
CCNB3-206ENST00000487204 KDM2BQ8NHM5 1336 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 KCPQ6ZWJ8 1503 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 UBR2Q8IWV8 1755 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 NEXNQ0ZGT2 675 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 RPAP2Q8IXW5 612 aaPredicted RBP9.05□□□□□ -0.96
CCNB3-206ENST00000487204 FBXO41Q8TF61 875 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
CCNB3-206ENST00000487204 PHAXQ9H814 394 aaKnown RBP9.05□□□□□ -0.96
CCNB3-206ENST00000487204 THSD7AQ9UPZ6 1657 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 PI4KAP2A4QPH2 592 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 PTCD1O75127 700 aaKnown RBP9.04□□□□□ -0.96
CCNB3-206ENST00000487204 HMMRO75330 724 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 PDIA6Q15084 440 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
CCNB3-206ENST00000487204 PI4KAP1Q8N8J0 262 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 ASAP1Q9ULH1 1129 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 USP16Q9Y5T5 823 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 TOGARAM1Q9Y4F4 1720 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
CCNB3-206ENST00000487204 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 F6X3S4 739 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 GNAI2P04899 355 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 LINS1Q8NG48 757 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 PLBD2Q8NHP8 589 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
CCNB3-206ENST00000487204 UBTFL1P0CB47 393 aaPredicted RBP9.02□□□□□ -0.97
CCNB3-206ENST00000487204 MYL6BP14649 208 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 RBM6P78332 1123 aaKnown RBP9.02□□□□□ -0.97
CCNB3-206ENST00000487204 BEND3Q5T5X7 828 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 MAP3K2Q9Y2U5 619 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 GLI3P10071 1580 aa9.02□□□□□ -0.97
CCNB3-206ENST00000487204 ADCY9O60503 1353 aa9.01□□□□□ -0.97
CCNB3-206ENST00000487204 ITGB4P16144 1822 aa9.01□□□□□ -0.97
CCNB3-206ENST00000487204 AIMP1Q12904 312 aaKnown RBP9.01□□□□□ -0.97
CCNB3-206ENST00000487204 PROSER3Q2NL68 480 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms