RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CABP4P57796 275 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 ZNF790Q6PG37 636 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 NFATC2IPQ8NCF5 419 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 STK31Q9BXU1 1019 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 USP35Q9P2H5 1018 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
NUDCD3-209ENST00000487118 UBR2Q8IWV8 1755 aa10.93□□□□□ -0.66
NUDCD3-209ENST00000487118 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
NUDCD3-209ENST00000487118 PRELPP51888 382 aa10.93□□□□□ -0.66
NUDCD3-209ENST00000487118 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
NUDCD3-209ENST00000487118 C5P01031 1676 aa10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 INTS3Q68E01 1043 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 G2E3Q7L622 706 aa10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 ITPRIPQ8IWB1 547 aa10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 CEP350Q5VT06 3117 aa10.92□□□□□ -0.66
NUDCD3-209ENST00000487118 N4BP2Q86UW6 1770 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 KCPQ6ZWJ8 1503 aa10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 EXOC5O00471 708 aa10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 FLIIQ13045 1269 aa10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 SLC39A6Q13433 755 aa10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 CENPQQ7L2Z9 268 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 CHMP4BQ9H444 224 aaKnown RBP10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 ZBTB40Q9NUA8 1239 aa10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 PXDNLA1KZ92 1463 aa10.91□□□□□ -0.66
NUDCD3-209ENST00000487118 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.66
NUDCD3-209ENST00000487118 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
NUDCD3-209ENST00000487118 TTC5Q8N0Z6 440 aa10.9□□□□□ -0.66
NUDCD3-209ENST00000487118 ZNF496Q96IT1 587 aaPredicted RBP10.9□□□□□ -0.66
NUDCD3-209ENST00000487118 FMNL2Q96PY5 1086 aa10.9□□□□□ -0.66
NUDCD3-209ENST00000487118 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.66
NUDCD3-209ENST00000487118 KCNQ2O43526 872 aa10.89□□□□□ -0.67
NUDCD3-209ENST00000487118 SNRPA1P09661 255 aaKnown RBP10.89□□□□□ -0.67
NUDCD3-209ENST00000487118 EIF2S2P20042 333 aaKnown RBP10.89□□□□□ -0.67
NUDCD3-209ENST00000487118 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
NUDCD3-209ENST00000487118 CHPF2Q9P2E5 772 aa10.89□□□□□ -0.67
NUDCD3-209ENST00000487118 DBF4Q9UBU7 674 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-209ENST00000487118 ITGB4P16144 1822 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 PRAMEF22A3QJZ6 481 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 BCL9O00512 1426 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 TRIM37O94972 964 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 CCT4P50991 539 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 DDB1Q16531 1140 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 NUP188Q5SRE5 1749 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 DDX21Q9NR30 783 aaKnown RBP eCLIP10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 TMOD3Q9NYL9 352 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 THSD7AQ9UPZ6 1657 aa10.88□□□□□ -0.67
NUDCD3-209ENST00000487118 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 IGHDP01880 384 aa10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 FKBP5Q13451 457 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 PDIA6Q15084 440 aa10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 CAMKK2Q96RR4 588 aa10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 PHAXQ9H814 394 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 HYPKQ9NX55 129 aa10.87□□□□□ -0.67
NUDCD3-209ENST00000487118 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 RREB1Q92766 1687 aa10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 F6X3S4 739 aa10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 HDAC1Q13547 482 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 PROSER3Q2NL68 480 aa10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 MARCH10Q8NA82 808 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 PIGBQ92521 554 aa10.86□□□□□ -0.67
NUDCD3-209ENST00000487118 ATP10DQ9P241 1426 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 APBA3O96018 575 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 HSPA6P17066 643 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 LRP10Q7Z4F1 713 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 RWDD1Q9H446 243 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 ATG3Q9NT62 314 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 ADCY9O60503 1353 aa10.85□□□□□ -0.67
NUDCD3-209ENST00000487118 ANXA1P04083 346 aa10.84□□□□□ -0.67
NUDCD3-209ENST00000487118 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
NUDCD3-209ENST00000487118 IBTKQ9P2D0 1353 aaPredicted RBP10.84□□□□□ -0.67
NUDCD3-209ENST00000487118 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 SLC4A10Q6U841 1118 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 KSR2Q6VAB6 950 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 MEIS3Q99687 375 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 ASAP1Q9ULH1 1129 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 SBF2Q86WG5 1849 aa10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 CICQ96RK0 1608 aaPredicted RBP10.83□□□□□ -0.68
NUDCD3-209ENST00000487118 PI4KAP2A4QPH2 592 aa10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 DDX58O95786 925 aaKnown RBP10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 BEND3Q5T5X7 828 aa10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 SMC5Q8IY18 1101 aa10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 PI4KAP1Q8N8J0 262 aa10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 TEX13AQ9BXU3 409 aaPredicted RBP10.82□□□□□ -0.68
NUDCD3-209ENST00000487118 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 PTCD1O75127 700 aaKnown RBP10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 NBPF10Q6P3W6 841 aaKnown RBP10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 NBPF15Q8N660 670 aa10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 ANKRD44Q8N8A2 993 aa10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 SRCIN1Q9C0H9 1055 aa10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 C1orf115Q9H7X2 142 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms