RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
ABCA2-218ENST00000487109 SERPINA10Q9UK55 444 aa14.32□□□□□ -0.12
ABCA2-218ENST00000487109 TNNT1P13805 278 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 RAB34Q9BZG1 259 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 EHMT1Q9H9B1 1298 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
ABCA2-218ENST00000487109 RAB3IL1Q8TBN0 382 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 ATF7IPQ6VMQ6 1270 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 ZSCAN31Q96LW9 406 aaPredicted RBP14.31□□□□□ -0.12
ABCA2-218ENST00000487109 POLR3DP05423 398 aaPredicted RBP14.31□□□□□ -0.12
ABCA2-218ENST00000487109 KLHL10Q6JEL2 608 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 GRPEL1Q9HAV7 217 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 CWC27Q6UX04 472 aaKnown RBP14.31□□□□□ -0.12
ABCA2-218ENST00000487109 PDCL2Q8N4E4 241 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 PPP1R14CQ8TAE6 165 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 JAKMIP1Q96N16 626 aaKnown RBP14.31□□□□□ -0.12
ABCA2-218ENST00000487109 FAM107BQ9H098 131 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 MKNK2Q9HBH9 465 aa14.31□□□□□ -0.12
ABCA2-218ENST00000487109 DNA2P51530 1060 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 MAP3K11Q16584 847 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 AIDAQ96BJ3 306 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 TIGD1Q96MW7 591 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
ABCA2-218ENST00000487109 TTC16Q8NEE8 873 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 ABCC11Q96J66 1382 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 CETN1Q12798 172 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 PTPN14Q15678 1187 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 CA8P35219 290 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 NAA15Q9BXJ9 866 aaKnown RBP14.3□□□□□ -0.12
ABCA2-218ENST00000487109 IKBKGQ9Y6K9 419 aa14.3□□□□□ -0.12
ABCA2-218ENST00000487109 TMEM266Q2M3C6 531 aa14.29□□□□□ -0.12
ABCA2-218ENST00000487109 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
ABCA2-218ENST00000487109 RAB11FIP3O75154 756 aa14.29□□□□□ -0.12
ABCA2-218ENST00000487109 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
ABCA2-218ENST00000487109 KIF4BQ2VIQ3 1234 aa14.29□□□□□ -0.12
ABCA2-218ENST00000487109 HLTFQ14527 1009 aaKnown RBP eCLIP14.29□□□□□ -0.124e-7■□□□□ 8.9
ABCA2-218ENST00000487109 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
ABCA2-218ENST00000487109 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
ABCA2-218ENST00000487109 IDH1O75874 414 aaKnown RBP14.28□□□□□ -0.12
ABCA2-218ENST00000487109 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
ABCA2-218ENST00000487109 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 ARL1P40616 181 aaPredicted RBP14.28□□□□□ -0.12
ABCA2-218ENST00000487109 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 SFPQP23246 707 aaKnown RBP eCLIP14.28□□□□□ -0.12
ABCA2-218ENST00000487109 ADGRL1O94910 1474 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 SLF2Q8IX21 1173 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 KIF18AQ8NI77 898 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
ABCA2-218ENST00000487109 ZPR1O75312 459 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 LIG1P18858 919 aa14.28□□□□□ -0.12
ABCA2-218ENST00000487109 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.12
ABCA2-218ENST00000487109 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.12
ABCA2-218ENST00000487109 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.12
ABCA2-218ENST00000487109 CAMK4Q16566 473 aa14.27□□□□□ -0.12
ABCA2-218ENST00000487109 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.12
ABCA2-218ENST00000487109 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.13
ABCA2-218ENST00000487109 TMOD3Q9NYL9 352 aa14.27□□□□□ -0.13
ABCA2-218ENST00000487109 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.13
ABCA2-218ENST00000487109 CCDC96Q2M329 555 aa14.27□□□□□ -0.13
ABCA2-218ENST00000487109 BICDL1Q6ZP65 573 aa14.27□□□□□ -0.13
ABCA2-218ENST00000487109 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.13
ABCA2-218ENST00000487109 PRPF4BQ13523 1007 aaKnown RBP14.26□□□□□ -0.13
ABCA2-218ENST00000487109 MINDY4BA8MYZ0 360 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 CAVIN4Q5BKX8 364 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 AKNAQ7Z591 1439 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 BBXQ8WY36 941 aaPredicted RBP14.26□□□□□ -0.13
ABCA2-218ENST00000487109 NSD3Q9BZ95 1437 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 PUF60Q9UHX1 559 aaKnown RBP14.26□□□□□ -0.13
ABCA2-218ENST00000487109 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
ABCA2-218ENST00000487109 CTR9Q6PD62 1173 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 ANKIB1Q9P2G1 1089 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 RGS22Q8NE09 1264 aa14.26□□□□□ -0.13
ABCA2-218ENST00000487109 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 A0A1W2PRG0 241 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 KIF20AO95235 890 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.13
ABCA2-218ENST00000487109 V9GYY5 206 aaPredicted RBP14.25□□□□□ -0.13
ABCA2-218ENST00000487109 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
ABCA2-218ENST00000487109 ACTN2P35609 894 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 GPATCH11Q8N954 259 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 MAP3K1Q13233 1512 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 NSD2O96028 1365 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 URI1O94763 535 aaPredicted RBP14.25□□□□□ -0.13
ABCA2-218ENST00000487109 NBPF1Q3BBV0 1214 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
ABCA2-218ENST00000487109 BAG4O95429 457 aaKnown RBP14.24□□□□□ -0.13
ABCA2-218ENST00000487109 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
ABCA2-218ENST00000487109 ANO10Q9NW15 660 aa14.24□□□□□ -0.13
ABCA2-218ENST00000487109 DZIP1Q86YF9 867 aaKnown RBP14.24□□□□□ -0.13
ABCA2-218ENST00000487109 SYCP3Q8IZU3 236 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms