RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 TJP1Q07157 1748 aa20.45■□□□□ 0.86
SEMA4D-219ENST00000486935 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
SEMA4D-219ENST00000486935 DPEP1P16444 411 aa20.45■□□□□ 0.86
SEMA4D-219ENST00000486935 CHD4Q14839 1912 aa20.45■□□□□ 0.86
SEMA4D-219ENST00000486935 BTBD11A6QL63 1104 aa20.44■□□□□ 0.86
SEMA4D-219ENST00000486935 TM4SF1P30408 202 aa20.44■□□□□ 0.86
SEMA4D-219ENST00000486935 DDR1Q08345 913 aa20.44■□□□□ 0.86
SEMA4D-219ENST00000486935 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
SEMA4D-219ENST00000486935 ADAMTS7Q9UKP4 1686 aa20.43■□□□□ 0.86
SEMA4D-219ENST00000486935 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
SEMA4D-219ENST00000486935 BCS1LQ9Y276 419 aa20.43■□□□□ 0.86
SEMA4D-219ENST00000486935 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
SEMA4D-219ENST00000486935 KCNQ3O43525 872 aa20.42■□□□□ 0.86
SEMA4D-219ENST00000486935 MCM10Q7L590 875 aa20.42■□□□□ 0.86
SEMA4D-219ENST00000486935 FMNL2Q96PY5 1086 aa20.42■□□□□ 0.86
SEMA4D-219ENST00000486935 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
SEMA4D-219ENST00000486935 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
SEMA4D-219ENST00000486935 C10orf71Q711Q0 1435 aa20.42■□□□□ 0.86
SEMA4D-219ENST00000486935 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
SEMA4D-219ENST00000486935 COL15A1P39059 1388 aa20.41■□□□□ 0.86
SEMA4D-219ENST00000486935 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
SEMA4D-219ENST00000486935 DCTN1Q14203 1278 aa20.4■□□□□ 0.86
SEMA4D-219ENST00000486935 C4AP0C0L4 1744 aa20.39■□□□□ 0.86
SEMA4D-219ENST00000486935 GIGYF1O75420 1035 aaPredicted RBP20.39■□□□□ 0.85
SEMA4D-219ENST00000486935 KCNA3P22001 575 aa20.39■□□□□ 0.85
SEMA4D-219ENST00000486935 EIF5P55010 431 aaKnown RBP20.39■□□□□ 0.85
SEMA4D-219ENST00000486935 C1QTNF8P60827 252 aa20.39■□□□□ 0.85
SEMA4D-219ENST00000486935 NFIXQ14938 502 aa20.39■□□□□ 0.85
SEMA4D-219ENST00000486935 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
SEMA4D-219ENST00000486935 A0A087WZG4 1122 aa20.38■□□□□ 0.85
SEMA4D-219ENST00000486935 NEFMP07197 916 aa20.38■□□□□ 0.85
SEMA4D-219ENST00000486935 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
SEMA4D-219ENST00000486935 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
SEMA4D-219ENST00000486935 BCL2L12Q9HB09 334 aa20.38■□□□□ 0.85
SEMA4D-219ENST00000486935 A1BGP04217 495 aa20.37■□□□□ 0.85
SEMA4D-219ENST00000486935 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
SEMA4D-219ENST00000486935 ZNF526Q8TF50 670 aaPredicted RBP20.37■□□□□ 0.85
SEMA4D-219ENST00000486935 PIM2Q9P1W9 311 aa20.37■□□□□ 0.85
SEMA4D-219ENST00000486935 ATP10DQ9P241 1426 aa20.36■□□□□ 0.85
SEMA4D-219ENST00000486935 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
SEMA4D-219ENST00000486935 CHRNA5P30532 468 aa20.36■□□□□ 0.85
SEMA4D-219ENST00000486935 BICDL1Q6ZP65 573 aa20.36■□□□□ 0.85
SEMA4D-219ENST00000486935 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
SEMA4D-219ENST00000486935 TBC1D2BQ9UPU7 963 aa20.36■□□□□ 0.85
SEMA4D-219ENST00000486935 SERPINB2P05120 415 aa20.35■□□□□ 0.85
SEMA4D-219ENST00000486935 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
SEMA4D-219ENST00000486935 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
SEMA4D-219ENST00000486935 IL6STP40189 918 aaPredicted RBP20.34■□□□□ 0.85
SEMA4D-219ENST00000486935 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
SEMA4D-219ENST00000486935 GPBP1L1Q9HC44 474 aaPredicted RBP20.34■□□□□ 0.85
SEMA4D-219ENST00000486935 VIRMAQ69YN4 1812 aaKnown RBP20.33■□□□□ 0.85
SEMA4D-219ENST00000486935 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
SEMA4D-219ENST00000486935 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.85
SEMA4D-219ENST00000486935 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
SEMA4D-219ENST00000486935 N4BP2Q86UW6 1770 aaPredicted RBP20.32■□□□□ 0.84
SEMA4D-219ENST00000486935 UBR2Q8IWV8 1755 aa20.32■□□□□ 0.84
SEMA4D-219ENST00000486935 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
SEMA4D-219ENST00000486935 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
SEMA4D-219ENST00000486935 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
SEMA4D-219ENST00000486935 PIP4K2AP48426 406 aaPredicted RBP20.31■□□□□ 0.84
SEMA4D-219ENST00000486935 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
SEMA4D-219ENST00000486935 PNNQ9H307 717 aaKnown RBP20.31■□□□□ 0.84
SEMA4D-219ENST00000486935 ADCY9O60503 1353 aa20.31■□□□□ 0.84
SEMA4D-219ENST00000486935 KIAA1551Q9HCM1 1747 aa20.3■□□□□ 0.84
SEMA4D-219ENST00000486935 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
SEMA4D-219ENST00000486935 NFE2L2Q16236 605 aa20.29■□□□□ 0.84
SEMA4D-219ENST00000486935 ADAMTS8Q9UP79 889 aa20.29■□□□□ 0.84
SEMA4D-219ENST00000486935 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
SEMA4D-219ENST00000486935 DZIP3Q86Y13 1208 aaKnown RBP20.28■□□□□ 0.84
SEMA4D-219ENST00000486935 MAPK8IP3Q9UPT6 1336 aa20.27■□□□□ 0.84
SEMA4D-219ENST00000486935 CAMTA2O94983 1202 aa20.27■□□□□ 0.84
SEMA4D-219ENST00000486935 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
SEMA4D-219ENST00000486935 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
SEMA4D-219ENST00000486935 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
SEMA4D-219ENST00000486935 H0YIN7 160 aa20.26■□□□□ 0.83
SEMA4D-219ENST00000486935 CCDC24Q8N4L8 307 aa20.26■□□□□ 0.83
SEMA4D-219ENST00000486935 C9orf131Q5VYM1 1079 aa20.25■□□□□ 0.83
SEMA4D-219ENST00000486935 CCDC146Q8IYE0 955 aa20.25■□□□□ 0.83
SEMA4D-219ENST00000486935 NPHP1O15259 732 aa20.24■□□□□ 0.83
SEMA4D-219ENST00000486935 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
SEMA4D-219ENST00000486935 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
SEMA4D-219ENST00000486935 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
SEMA4D-219ENST00000486935 TTLL6Q8N841 843 aa20.23■□□□□ 0.83
SEMA4D-219ENST00000486935 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
SEMA4D-219ENST00000486935 BRIP1Q9BX63 1249 aa20.23■□□□□ 0.83
SEMA4D-219ENST00000486935 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
SEMA4D-219ENST00000486935 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
SEMA4D-219ENST00000486935 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
SEMA4D-219ENST00000486935 PDE6BP35913 854 aa20.21■□□□□ 0.83
SEMA4D-219ENST00000486935 RIPK4P57078 832 aa20.21■□□□□ 0.83
SEMA4D-219ENST00000486935 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
SEMA4D-219ENST00000486935 ZNF622Q969S3 477 aaKnown RBP eCLIP20.21■□□□□ 0.83
SEMA4D-219ENST00000486935 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
SEMA4D-219ENST00000486935 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
SEMA4D-219ENST00000486935 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
SEMA4D-219ENST00000486935 RNF181Q9P0P0 153 aa20.2■□□□□ 0.82
SEMA4D-219ENST00000486935 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
SEMA4D-219ENST00000486935 KIF3CO14782 793 aa20.19■□□□□ 0.82
SEMA4D-219ENST00000486935 PDZRN3Q9UPQ7 1066 aa20.19■□□□□ 0.82
SEMA4D-219ENST00000486935 ST5P78524 1137 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms