RNA–Protein interactions for RNA: ENST00000486879.2

TTC13-206, Transcript of tetratricopeptide repeat domain 13, humanhuman

TSL 5

Gene TTC13, Length 492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-206ENST00000486879 SIRT1Q96EB6 747 aa9.61□□□□□ -0.87
TTC13-206ENST00000486879 NOP53Q9NZM5 478 aaKnown RBP9.61□□□□□ -0.87
TTC13-206ENST00000486879 CHRNA4P43681 627 aa9.6□□□□□ -0.87
TTC13-206ENST00000486879 EIF4G2P78344 907 aaKnown RBP eCLIP9.6□□□□□ -0.87
TTC13-206ENST00000486879 TNP2Q05952 138 aa9.6□□□□□ -0.87
TTC13-206ENST00000486879 IRF5Q13568 498 aa9.6□□□□□ -0.87
TTC13-206ENST00000486879 NEURL1BA8MQ27 555 aa9.59□□□□□ -0.87
TTC13-206ENST00000486879 CHSY3Q70JA7 882 aa9.59□□□□□ -0.87
TTC13-206ENST00000486879 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
TTC13-206ENST00000486879 ADH6P28332 368 aa9.58□□□□□ -0.88
TTC13-206ENST00000486879 PLA2G4AP47712 749 aa9.58□□□□□ -0.88
TTC13-206ENST00000486879 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
TTC13-206ENST00000486879 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
TTC13-206ENST00000486879 SLC4A9Q96Q91 983 aa9.58□□□□□ -0.88
TTC13-206ENST00000486879 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
TTC13-206ENST00000486879 IQSEC3Q9UPP2 1182 aaPredicted RBP9.58□□□□□ -0.88
TTC13-206ENST00000486879 TBC1D2BQ9UPU7 963 aa9.58□□□□□ -0.88
TTC13-206ENST00000486879 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
TTC13-206ENST00000486879 SMTNP53814 917 aa9.57□□□□□ -0.88
TTC13-206ENST00000486879 GDF10P55107 478 aa9.57□□□□□ -0.88
TTC13-206ENST00000486879 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
TTC13-206ENST00000486879 MTFR1Q15390 333 aa9.57□□□□□ -0.88
TTC13-206ENST00000486879 ZDHHC3Q9NYG2 299 aa9.56□□□□□ -0.88
TTC13-206ENST00000486879 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
TTC13-206ENST00000486879 FAM157BP0CG42 384 aa9.55□□□□□ -0.88
TTC13-206ENST00000486879 MAP7D1Q3KQU3 841 aa9.55□□□□□ -0.88
TTC13-206ENST00000486879 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
TTC13-206ENST00000486879 MDFIQ99750 246 aa9.55□□□□□ -0.88
TTC13-206ENST00000486879 CDK2AP1O14519 115 aa9.54□□□□□ -0.88
TTC13-206ENST00000486879 TRIM11Q96F44 468 aa9.54□□□□□ -0.88
TTC13-206ENST00000486879 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
TTC13-206ENST00000486879 EFSO43281 561 aa9.53□□□□□ -0.88
TTC13-206ENST00000486879 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
TTC13-206ENST00000486879 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
TTC13-206ENST00000486879 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
TTC13-206ENST00000486879 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
TTC13-206ENST00000486879 CD33P20138 364 aa9.51□□□□□ -0.89
TTC13-206ENST00000486879 LAMC2Q13753 1193 aa9.51□□□□□ -0.89
TTC13-206ENST00000486879 DCDC2BA2VCK2 349 aa9.5□□□□□ -0.89
TTC13-206ENST00000486879 A6NJY4 79 aa9.5□□□□□ -0.89
TTC13-206ENST00000486879 NBPF1Q3BBV0 1214 aa9.5□□□□□ -0.89
TTC13-206ENST00000486879 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
TTC13-206ENST00000486879 PRM3Q9NNZ6 103 aa9.5□□□□□ -0.89
TTC13-206ENST00000486879 SPATA31C1P0DKV0 1188 aa9.49□□□□□ -0.89
TTC13-206ENST00000486879 PLPP7Q8NBV4 271 aa9.49□□□□□ -0.89
TTC13-206ENST00000486879 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
TTC13-206ENST00000486879 KRTAP9-2Q9BYQ4 174 aa9.49□□□□□ -0.89
TTC13-206ENST00000486879 USP3Q9Y6I4 520 aa9.49□□□□□ -0.89
TTC13-206ENST00000486879 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
TTC13-206ENST00000486879 DOC2BQ14184 412 aa9.48□□□□□ -0.89
TTC13-206ENST00000486879 ARSJQ5FYB0 599 aaPredicted RBP9.48□□□□□ -0.89
TTC13-206ENST00000486879 PLVAPQ9BX97 442 aa9.48□□□□□ -0.89
TTC13-206ENST00000486879 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
TTC13-206ENST00000486879 PCDHGA11Q9Y5H2 935 aa9.48□□□□□ -0.89
TTC13-206ENST00000486879 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
TTC13-206ENST00000486879 SEMA6BQ9H3T3 888 aa9.47□□□□□ -0.89
TTC13-206ENST00000486879 MARK1Q9P0L2 795 aa9.47□□□□□ -0.89
TTC13-206ENST00000486879 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
TTC13-206ENST00000486879 ELOA3DA6NLF2 546 aaPredicted RBP9.46□□□□□ -0.9
TTC13-206ENST00000486879 GATA4P43694 442 aa9.46□□□□□ -0.9
TTC13-206ENST00000486879 PCBP4P57723 403 aaKnown RBP9.46□□□□□ -0.9
TTC13-206ENST00000486879 VAC14Q08AM6 782 aa9.46□□□□□ -0.9
TTC13-206ENST00000486879 COL9A3Q14050 684 aaPredicted RBP9.46□□□□□ -0.9
TTC13-206ENST00000486879 ELOA3BQ3SY89 546 aa9.46□□□□□ -0.9
TTC13-206ENST00000486879 ELOA3Q8NG57 546 aa9.46□□□□□ -0.9
TTC13-206ENST00000486879 C7orf43Q8WVR3 580 aa9.46□□□□□ -0.9
TTC13-206ENST00000486879 KRTAP9-6A0A140TA67 174 aa9.45□□□□□ -0.9
TTC13-206ENST00000486879 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
TTC13-206ENST00000486879 RSPO4Q2I0M5 234 aaPredicted RBP9.45□□□□□ -0.9
TTC13-206ENST00000486879 NKAPLQ5M9Q1 402 aa9.45□□□□□ -0.9
TTC13-206ENST00000486879 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
TTC13-206ENST00000486879 SERTAD1Q9UHV2 236 aa9.45□□□□□ -0.9
TTC13-206ENST00000486879 SOX11P35716 441 aa9.44□□□□□ -0.9
TTC13-206ENST00000486879 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
TTC13-206ENST00000486879 SIN3BO75182 1162 aa9.43□□□□□ -0.9
TTC13-206ENST00000486879 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
TTC13-206ENST00000486879 PRR12Q9ULL5 1215 aa9.43□□□□□ -0.9
TTC13-206ENST00000486879 GPC6Q9Y625 555 aaPredicted RBP9.43□□□□□ -0.9
TTC13-206ENST00000486879 EML1O00423 815 aa9.42□□□□□ -0.9
TTC13-206ENST00000486879 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
TTC13-206ENST00000486879 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
TTC13-206ENST00000486879 EPHA4P54764 986 aa9.41□□□□□ -0.9
TTC13-206ENST00000486879 TEAD4Q15561 434 aa9.41□□□□□ -0.9
TTC13-206ENST00000486879 SYT9Q86SS6 491 aa9.41□□□□□ -0.9
TTC13-206ENST00000486879 TNFRSF25Q93038 417 aa9.41□□□□□ -0.9
TTC13-206ENST00000486879 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
TTC13-206ENST00000486879 BACH1O14867 736 aa9.4□□□□□ -0.9
TTC13-206ENST00000486879 LZTS3O60299 673 aaPredicted RBP9.4□□□□□ -0.9
TTC13-206ENST00000486879 TXLNAP40222 546 aa9.4□□□□□ -0.9
TTC13-206ENST00000486879 ZMYM1Q5SVZ6 1142 aa9.4□□□□□ -0.9
TTC13-206ENST00000486879 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.9
TTC13-206ENST00000486879 ALAS2P22557 587 aa9.39□□□□□ -0.91
TTC13-206ENST00000486879 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
TTC13-206ENST00000486879 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
TTC13-206ENST00000486879 STARD13Q9Y3M8 1113 aa9.39□□□□□ -0.91
TTC13-206ENST00000486879 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
TTC13-206ENST00000486879 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
TTC13-206ENST00000486879 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
TTC13-206ENST00000486879 L3MBTL2Q969R5 705 aa9.38□□□□□ -0.91
TTC13-206ENST00000486879 TPSG1Q9NRR2 321 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms