RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	EIF2S2	P20042	333 aa	Known RBP	11.48	□□□□□ -0.57
KIFC1-213	ENST00000486695	ZNF790	Q6PG37	636 aa		11.48	□□□□□ -0.57
KIFC1-213	ENST00000486695	TMEM57	Q8N5G2	664 aa		11.48	□□□□□ -0.57
KIFC1-213	ENST00000486695	SHANK3	Q9BYB0	1731 aa		11.48	□□□□□ -0.57
KIFC1-213	ENST00000486695	ONECUT3	O60422	494 aa	Predicted RBP	11.47	□□□□□ -0.57
KIFC1-213	ENST00000486695	BARGIN	Q6ZT62	677 aa		11.47	□□□□□ -0.57
KIFC1-213	ENST00000486695	NECTIN2	Q92692	538 aa		11.47	□□□□□ -0.57
KIFC1-213	ENST00000486695	HEG1	Q9ULI3	1381 aa		11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	ABCC4	O15439	1325 aa		11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	GIGYF1	O75420	1035 aa	Predicted RBP	11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	SLC39A6	Q13433	755 aa		11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	SF3B2	Q13435	895 aa	Known RBP	11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	DDB1	Q16531	1140 aa		11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	FMNL2	Q96PY5	1086 aa		11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	DBF4	Q9UBU7	674 aa	Predicted RBP	11.46	□□□□□ -0.57
KIFC1-213	ENST00000486695	SNRPA1	P09661	255 aa	Known RBP	11.45	□□□□□ -0.58
KIFC1-213	ENST00000486695	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.45	□□□□□ -0.58
KIFC1-213	ENST00000486695	KRT27	Q7Z3Y8	459 aa		11.45	□□□□□ -0.58
KIFC1-213	ENST00000486695	DEFB132	Q7Z7B7	95 aa		11.45	□□□□□ -0.58
KIFC1-213	ENST00000486695	TMOD3	Q9NYL9	352 aa		11.45	□□□□□ -0.58
KIFC1-213	ENST00000486695	FBXO3	Q9UK99	471 aa		11.45	□□□□□ -0.58
KIFC1-213	ENST00000486695	TNS2	Q63HR2	1409 aa		11.44	□□□□□ -0.58
KIFC1-213	ENST00000486695	FLII	Q13045	1269 aa		11.44	□□□□□ -0.58
KIFC1-213	ENST00000486695	FKBP5	Q13451	457 aa	Predicted RBP	11.44	□□□□□ -0.58
KIFC1-213	ENST00000486695	INTS3	Q68E01	1043 aa	Known RBP	11.44	□□□□□ -0.58
KIFC1-213	ENST00000486695	G2E3	Q7L622	706 aa		11.44	□□□□□ -0.58
KIFC1-213	ENST00000486695	ZNF496	Q96IT1	587 aa	Predicted RBP	11.44	□□□□□ -0.58
KIFC1-213	ENST00000486695	CCT4	P50991	539 aa	Known RBP	11.43	□□□□□ -0.58
KIFC1-213	ENST00000486695	RWDD1	Q9H446	243 aa	Predicted RBP	11.43	□□□□□ -0.58
KIFC1-213	ENST00000486695	HYPK	Q9NX55	129 aa		11.43	□□□□□ -0.58
KIFC1-213	ENST00000486695	CHPF2	Q9P2E5	772 aa		11.43	□□□□□ -0.58
KIFC1-213	ENST00000486695	ZBTB7B	O15156	539 aa	Predicted RBP	11.42	□□□□□ -0.58
KIFC1-213	ENST00000486695	SLC4A10	Q6U841	1118 aa		11.42	□□□□□ -0.58
KIFC1-213	ENST00000486695	ZBTB40	Q9NUA8	1239 aa		11.42	□□□□□ -0.58
KIFC1-213	ENST00000486695	TOGARAM1	Q9Y4F4	1720 aa		11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695		A0A0G2JS52	829 aa		11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695	MYT1	Q01538	1121 aa		11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695	FAM98C	Q17RN3	349 aa	Known RBP	11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695	PHAX	Q9H814	394 aa	Known RBP	11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695	ITGB4	P16144	1822 aa		11.41	□□□□□ -0.58
KIFC1-213	ENST00000486695	KDM2B	Q8NHM5	1336 aa		11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	PAPPA	Q13219	1627 aa		11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	PRAMEF22	A3QJZ6	481 aa		11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	DDX58	O95786	925 aa	Known RBP	11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	PIGB	Q92521	554 aa		11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	SYTL4	Q96C24	671 aa	Predicted RBP	11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	PCDHB15	Q9Y5E8	787 aa		11.4	□□□□□ -0.58
KIFC1-213	ENST00000486695	C5	P01031	1676 aa		11.4	□□□□□ -0.59
KIFC1-213	ENST00000486695	UBR2	Q8IWV8	1755 aa		11.39	□□□□□ -0.59
KIFC1-213	ENST00000486695	SPDYE4	A6NLX3	237 aa		11.39	□□□□□ -0.59
KIFC1-213	ENST00000486695		F6X3S4	739 aa		11.39	□□□□□ -0.59
KIFC1-213	ENST00000486695	BAG6	P46379	1132 aa		11.39	□□□□□ -0.59
KIFC1-213	ENST00000486695	LAMB4	A4D0S4	1761 aa		11.39	□□□□□ -0.59
KIFC1-213	ENST00000486695	ERBB4	Q15303	1308 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	PTCD1	O75127	700 aa	Known RBP	11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	IGHD	P01880	384 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	PRIM1	P49642	420 aa	Known RBP	11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	HDAC1	Q13547	482 aa	Predicted RBP	11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	KSR2	Q6VAB6	950 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	MARCH10	Q8NA82	808 aa	Predicted RBP	11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	ATG3	Q9NT62	314 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	USP16	Q9Y5T5	823 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	KAT6B	Q8WYB5	2073 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	PXDNL	A1KZ92	1463 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	DOT1L	Q8TEK3	1739 aa		11.38	□□□□□ -0.59
KIFC1-213	ENST00000486695	BCL9	O00512	1426 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	KCP	Q6ZWJ8	1503 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	PI4KAP2	A4QPH2	592 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	ANXA1	P04083	346 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	GNAI3	P08754	354 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	MYL6B	P14649	208 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	VSIG10	Q8N0Z9	540 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	PI4KAP1	Q8N8J0	262 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	DNAAF4	Q8WXU2	420 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	RBM42	Q9BTD8	480 aa	Known RBP	11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	SRCIN1	Q9C0H9	1055 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	ASAP1	Q9ULH1	1129 aa		11.37	□□□□□ -0.59
KIFC1-213	ENST00000486695	AIMP1	Q12904	312 aa	Known RBP	11.36	□□□□□ -0.59
KIFC1-213	ENST00000486695	PDIA6	Q15084	440 aa		11.36	□□□□□ -0.59
KIFC1-213	ENST00000486695	PROSER3	Q2NL68	480 aa		11.36	□□□□□ -0.59
KIFC1-213	ENST00000486695	FAM182B	Q5T319	152 aa		11.36	□□□□□ -0.59
KIFC1-213	ENST00000486695	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.36	□□□□□ -0.59
KIFC1-213	ENST00000486695	LRP5	O75197	1615 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	PSD	A5PKW4	1024 aa	Predicted RBP	11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	STARD3NL	O95772	234 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	EN1	Q05925	392 aa	Predicted RBP	11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	COPS6	Q7L5N1	327 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	RIC3	Q7Z5B4	369 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	ACSBG1	Q96GR2	724 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	HDAC5	Q9UQL6	1122 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	MAP3K2	Q9Y2U5	619 aa		11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.35	□□□□□ -0.59
KIFC1-213	ENST00000486695	ADCY9	O60503	1353 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	ALDH1L1	O75891	902 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	GNAI2	P04899	355 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	NEXN	Q0ZGT2	675 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	ANKRD13D	Q6ZTN6	518 aa		11.34	□□□□□ -0.59
KIFC1-213	ENST00000486695	XAGE3	Q8WTP9	111 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms