RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 GDF2Q9UK05 429 aaPredicted RBP9.3□□□□□ -0.92
GCFC2-209ENST00000486016 HCN2Q9UL51 889 aa9.3□□□□□ -0.92
GCFC2-209ENST00000486016 A6NJY4 79 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 C2CD2LO14523 706 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 BNIP3LO60238 219 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 CSB-PGBD3P0DP91 1061 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 SKIP12755 728 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 FLIIQ13045 1269 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 NIFKQ9BYG3 293 aaKnown RBP9.29□□□□□ -0.92
GCFC2-209ENST00000486016 SERTAD1Q9UHV2 236 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
GCFC2-209ENST00000486016 EML3Q32P44 896 aa9.28□□□□□ -0.92
GCFC2-209ENST00000486016 EDARADDQ8WWZ3 215 aa9.28□□□□□ -0.92
GCFC2-209ENST00000486016 SUV39H2Q9H5I1 410 aa9.28□□□□□ -0.92
GCFC2-209ENST00000486016 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
GCFC2-209ENST00000486016 NCOA4Q13772 614 aa9.27□□□□□ -0.93
GCFC2-209ENST00000486016 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
GCFC2-209ENST00000486016 TBC1D9Q6ZT07 1266 aa9.27□□□□□ -0.93
GCFC2-209ENST00000486016 NOD1Q9Y239 953 aa9.27□□□□□ -0.93
GCFC2-209ENST00000486016 C1QTNF9BB2RNN3 333 aa9.26□□□□□ -0.93
GCFC2-209ENST00000486016 PIK3R2O00459 728 aa9.26□□□□□ -0.93
GCFC2-209ENST00000486016 GTF2IP78347 998 aa9.26□□□□□ -0.93
GCFC2-209ENST00000486016 GOLGA6L1Q8N7Z2 621 aa9.26□□□□□ -0.93
GCFC2-209ENST00000486016 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
GCFC2-209ENST00000486016 ZCCHC2Q9C0B9 1178 aaKnown RBP9.26□□□□□ -0.93
GCFC2-209ENST00000486016 USP17L5A8MUK1 530 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 RAD21O60216 631 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 AMPD1P23109 780 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 EPHA4P54764 986 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 CTBSQ01459 385 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 NLRP8Q86W28 1048 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 UCN2Q96RP3 112 aa9.25□□□□□ -0.93
GCFC2-209ENST00000486016 ZBTB7BO15156 539 aaPredicted RBP9.24□□□□□ -0.93
GCFC2-209ENST00000486016 UBTFP17480 764 aaKnown RBP9.24□□□□□ -0.93
GCFC2-209ENST00000486016 FGFR3P22607 806 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
GCFC2-209ENST00000486016 ZNF358Q9NW07 568 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
GCFC2-209ENST00000486016 PCDHGC4Q9Y5F7 938 aa9.24□□□□□ -0.93
GCFC2-209ENST00000486016 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
GCFC2-209ENST00000486016 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
GCFC2-209ENST00000486016 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
GCFC2-209ENST00000486016 ZDHHC1Q8WTX9 485 aa9.23□□□□□ -0.93
GCFC2-209ENST00000486016 A0A1W2PNR3 127 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 BACH1O14867 736 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 ITGB7P26010 798 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 FIGNL1Q6PIW4 674 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 KRTAP1-3Q8IUG1 177 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
GCFC2-209ENST00000486016 C7orf43Q8WVR3 580 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 AIDAQ96BJ3 306 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 ZIC5Q96T25 663 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 SEMA6BQ9H3T3 888 aa9.22□□□□□ -0.93
GCFC2-209ENST00000486016 GNB5O14775 395 aa9.21□□□□□ -0.94
GCFC2-209ENST00000486016 TNP2Q05952 138 aa9.21□□□□□ -0.94
GCFC2-209ENST00000486016 SLCO4C1Q6ZQN7 724 aa9.21□□□□□ -0.94
GCFC2-209ENST00000486016 KIAA1024Q9UPX6 916 aa9.21□□□□□ -0.94
GCFC2-209ENST00000486016 ATXN7O15265 892 aaPredicted RBP9.2□□□□□ -0.94
GCFC2-209ENST00000486016 BMP4P12644 408 aa9.2□□□□□ -0.94
GCFC2-209ENST00000486016 CHRNA4P43681 627 aa9.2□□□□□ -0.94
GCFC2-209ENST00000486016 CABP1Q9NZU7 370 aa9.2□□□□□ -0.94
GCFC2-209ENST00000486016 USP17L3A6NCW0 530 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 USP17L4A6NCW7 530 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 TXLNAP40222 546 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 CLDN10P78369 228 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 DOC2BQ14184 412 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 TEAD4Q15561 434 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 NBPF1Q3BBV0 1214 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 ZMYM1Q5SVZ6 1142 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 FAM182BQ5T319 152 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 USP17L2Q6R6M4 530 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 USP17L1Q7RTZ2 530 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 NOP53Q9NZM5 478 aaKnown RBP9.19□□□□□ -0.94
GCFC2-209ENST00000486016 GGA1Q9UJY5 639 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 PARP3Q9Y6F1 533 aa9.19□□□□□ -0.94
GCFC2-209ENST00000486016 ATP9BO43861 1147 aa9.18□□□□□ -0.94
GCFC2-209ENST00000486016 DKK1O94907 266 aa9.18□□□□□ -0.94
GCFC2-209ENST00000486016 ARAFP10398 606 aa9.18□□□□□ -0.94
GCFC2-209ENST00000486016 MAPTP10636 758 aaKnown RBP9.18□□□□□ -0.94
GCFC2-209ENST00000486016 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
GCFC2-209ENST00000486016 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
GCFC2-209ENST00000486016 TNS4Q8IZW8 715 aa9.18□□□□□ -0.94
GCFC2-209ENST00000486016 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
GCFC2-209ENST00000486016 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
GCFC2-209ENST00000486016 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
GCFC2-209ENST00000486016 SLC9A9Q8IVB4 645 aa9.17□□□□□ -0.94
GCFC2-209ENST00000486016 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
GCFC2-209ENST00000486016 EML1O00423 815 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 EFSO43281 561 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 FAM157BP0CG42 384 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms