RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 COL24A1Q17RW2 1714 aa21.36■■□□□ 1.01
DDR1-246ENST00000485023 RFC4P35249 363 aa21.36■■□□□ 1.01
DDR1-246ENST00000485023 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
DDR1-246ENST00000485023 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
DDR1-246ENST00000485023 CANXP27824 592 aaKnown RBP21.35■■□□□ 1.01
DDR1-246ENST00000485023 LMOD3Q0VAK6 560 aa21.35■■□□□ 1.01
DDR1-246ENST00000485023 STARD3NLO95772 234 aa21.34■■□□□ 1.01
DDR1-246ENST00000485023 ADRA2BP18089 450 aa21.34■■□□□ 1.01
DDR1-246ENST00000485023 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
DDR1-246ENST00000485023 KDM3BQ7LBC6 1761 aa21.33■■□□□ 1.01
DDR1-246ENST00000485023 SOS1Q07889 1333 aaPredicted RBP21.33■■□□□ 1.01
DDR1-246ENST00000485023 ZNF330Q9Y3S2 320 aaPredicted RBP21.33■■□□□ 1.01
DDR1-246ENST00000485023 APAF1O14727 1248 aa21.32■■□□□ 1
DDR1-246ENST00000485023 PNISRQ8TF01 805 aaKnown RBP21.32■■□□□ 1
DDR1-246ENST00000485023 COL15A1P39059 1388 aa21.32■■□□□ 1
DDR1-246ENST00000485023 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
DDR1-246ENST00000485023 TEX13AQ9BXU3 409 aaPredicted RBP21.31■■□□□ 1
DDR1-246ENST00000485023 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
DDR1-246ENST00000485023 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
DDR1-246ENST00000485023 A1BGP04217 495 aa21.3■■□□□ 1
DDR1-246ENST00000485023 SNRPA1P09661 255 aaKnown RBP21.3■■□□□ 1
DDR1-246ENST00000485023 SYT17Q9BSW7 474 aa21.3■■□□□ 1
DDR1-246ENST00000485023 USP16Q9Y5T5 823 aa21.3■■□□□ 1
DDR1-246ENST00000485023 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
DDR1-246ENST00000485023 GYS1P13807 737 aa21.29■■□□□ 1
DDR1-246ENST00000485023 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
DDR1-246ENST00000485023 MMP10P09238 476 aa21.28■■□□□ 1
DDR1-246ENST00000485023 EIF4A1P60842 406 aaKnown RBP21.27■■□□□ 1
DDR1-246ENST00000485023 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
DDR1-246ENST00000485023 ZPR1O75312 459 aa21.26■□□□□ 0.99
DDR1-246ENST00000485023 FKBP8Q14318 412 aa21.26■□□□□ 0.99
DDR1-246ENST00000485023 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
DDR1-246ENST00000485023 NLGN2Q8NFZ4 835 aa21.26■□□□□ 0.99
DDR1-246ENST00000485023 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
DDR1-246ENST00000485023 EIF5P55010 431 aaKnown RBP21.24■□□□□ 0.99
DDR1-246ENST00000485023 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
DDR1-246ENST00000485023 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
DDR1-246ENST00000485023 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
DDR1-246ENST00000485023 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
DDR1-246ENST00000485023 NARFQ9UHQ1 456 aa21.23■□□□□ 0.99
DDR1-246ENST00000485023 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
DDR1-246ENST00000485023 PARP3Q9Y6F1 533 aa21.21■□□□□ 0.99
DDR1-246ENST00000485023 A0A087WZG4 1122 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 NBPF26B4DH59 902 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 DDR1Q08345 913 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 KRT24Q2M2I5 525 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 NBPF10Q6P3W6 841 aaKnown RBP21.2■□□□□ 0.98
DDR1-246ENST00000485023 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
DDR1-246ENST00000485023 NBPF15Q8N660 670 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 BCL2L12Q9HB09 334 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 SCN7AQ01118 1682 aa21.2■□□□□ 0.98
DDR1-246ENST00000485023 CHL1O00533 1208 aa21.19■□□□□ 0.98
DDR1-246ENST00000485023 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
DDR1-246ENST00000485023 BABAM1Q9NWV8 329 aa21.19■□□□□ 0.98
DDR1-246ENST00000485023 SALL2Q9Y467 1007 aaPredicted RBP21.19■□□□□ 0.98
DDR1-246ENST00000485023 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
DDR1-246ENST00000485023 EIF2S2P20042 333 aaKnown RBP21.18■□□□□ 0.98
DDR1-246ENST00000485023 DZIP3Q86Y13 1208 aaKnown RBP21.18■□□□□ 0.98
DDR1-246ENST00000485023 NGEFQ8N5V2 710 aa21.18■□□□□ 0.98
DDR1-246ENST00000485023 WWC3Q9ULE0 1092 aa21.18■□□□□ 0.98
DDR1-246ENST00000485023 CD2APQ9Y5K6 639 aa21.18■□□□□ 0.98
DDR1-246ENST00000485023 MYL6BP14649 208 aa21.17■□□□□ 0.98
DDR1-246ENST00000485023 NFIXQ14938 502 aa21.17■□□□□ 0.98
DDR1-246ENST00000485023 NECTIN2Q92692 538 aa21.17■□□□□ 0.98
DDR1-246ENST00000485023 CFAP44Q96MT7 982 aa21.16■□□□□ 0.98
DDR1-246ENST00000485023 MBIPQ9NS73 344 aa21.16■□□□□ 0.98
DDR1-246ENST00000485023 C10orf71Q711Q0 1435 aa21.15■□□□□ 0.98
DDR1-246ENST00000485023 POLRMTO00411 1230 aaKnown RBP21.15■□□□□ 0.98
DDR1-246ENST00000485023 CAMTA2O94983 1202 aa21.15■□□□□ 0.98
DDR1-246ENST00000485023 CALD1Q05682 793 aaKnown RBP21.15■□□□□ 0.98
DDR1-246ENST00000485023 TM4SF1P30408 202 aa21.14■□□□□ 0.97
DDR1-246ENST00000485023 TBC1D9BQ66K14 1250 aa21.14■□□□□ 0.97
DDR1-246ENST00000485023 IFT57Q9NWB7 429 aa21.14■□□□□ 0.97
DDR1-246ENST00000485023 BCORQ6W2J9 1755 aa21.14■□□□□ 0.97
DDR1-246ENST00000485023 ANXA1P04083 346 aa21.13■□□□□ 0.97
DDR1-246ENST00000485023 YY1P25490 414 aa21.13■□□□□ 0.97
DDR1-246ENST00000485023 GNAI1P63096 354 aa21.13■□□□□ 0.97
DDR1-246ENST00000485023 GPR162Q16538 588 aa21.13■□□□□ 0.97
DDR1-246ENST00000485023 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
DDR1-246ENST00000485023 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
DDR1-246ENST00000485023 PXDNLA1KZ92 1463 aa21.11■□□□□ 0.97
DDR1-246ENST00000485023 SERPINB2P05120 415 aa21.1■□□□□ 0.97
DDR1-246ENST00000485023 PROSER3Q2NL68 480 aa21.1■□□□□ 0.97
DDR1-246ENST00000485023 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
DDR1-246ENST00000485023 TSR2Q969E8 191 aaKnown RBP21.1■□□□□ 0.97
DDR1-246ENST00000485023 ELL2O00472 640 aaPredicted RBP21.09■□□□□ 0.97
DDR1-246ENST00000485023 CCDC27Q2M243 656 aa21.09■□□□□ 0.97
DDR1-246ENST00000485023 DIEXFQ68CQ4 756 aaKnown RBP21.09■□□□□ 0.97
DDR1-246ENST00000485023 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
DDR1-246ENST00000485023 KIF13BQ9NQT8 1826 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 ERBB4Q15303 1308 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 A0A0G2JLW4 131 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 YBX3P16989 372 aaKnown RBP eCLIP21.08■□□□□ 0.97
DDR1-246ENST00000485023 HDGFL1Q5TGJ6 251 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 DUSP27Q5VZP5 1158 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 KIF6Q6ZMV9 814 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 CCDC24Q8N4L8 307 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 ZBTB3Q9H5J0 574 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 ZNF652Q9Y2D9 606 aa21.08■□□□□ 0.97
DDR1-246ENST00000485023 CARMIL3Q8ND23 1372 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms