RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 INTS5Q6P9B9 1019 aaKnown RBP12.1□□□□□ -0.47
NEB-213ENST00000484968 G2E3Q7L622 706 aa12.1□□□□□ -0.47
NEB-213ENST00000484968 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
NEB-213ENST00000484968 BCL2L13Q9BXK5 485 aa12.1□□□□□ -0.47
NEB-213ENST00000484968 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
NEB-213ENST00000484968 HOXB7P09629 217 aa12.09□□□□□ -0.47
NEB-213ENST00000484968 EZH2Q15910 746 aaKnown RBP12.09□□□□□ -0.47
NEB-213ENST00000484968 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
NEB-213ENST00000484968 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
NEB-213ENST00000484968 CCNL1Q9UK58 526 aaPredicted RBP12.09□□□□□ -0.47
NEB-213ENST00000484968 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
NEB-213ENST00000484968 HDGFL1Q5TGJ6 251 aa12.08□□□□□ -0.48
NEB-213ENST00000484968 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
NEB-213ENST00000484968 ZNF831Q5JPB2 1677 aa12.07□□□□□ -0.48
NEB-213ENST00000484968 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
NEB-213ENST00000484968 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
NEB-213ENST00000484968 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
NEB-213ENST00000484968 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
NEB-213ENST00000484968 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
NEB-213ENST00000484968 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
NEB-213ENST00000484968 CRKLP46109 303 aaKnown RBP12.06□□□□□ -0.48
NEB-213ENST00000484968 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
NEB-213ENST00000484968 PLIN1O60240 522 aa12.05□□□□□ -0.48
NEB-213ENST00000484968 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
NEB-213ENST00000484968 ALDH1L2Q3SY69 923 aa12.05□□□□□ -0.48
NEB-213ENST00000484968 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
NEB-213ENST00000484968 RREB1Q92766 1687 aa12.05□□□□□ -0.48
NEB-213ENST00000484968 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
NEB-213ENST00000484968 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
NEB-213ENST00000484968 MYL6BP14649 208 aa12.04□□□□□ -0.48
NEB-213ENST00000484968 CANXP27824 592 aaKnown RBP12.04□□□□□ -0.48
NEB-213ENST00000484968 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
NEB-213ENST00000484968 CCDC30Q5VVM6 783 aa12.04□□□□□ -0.48
NEB-213ENST00000484968 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
NEB-213ENST00000484968 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
NEB-213ENST00000484968 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
NEB-213ENST00000484968 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
NEB-213ENST00000484968 RNF123Q5XPI4 1314 aa12.04□□□□□ -0.48
NEB-213ENST00000484968 TAF1LQ8IZX4 1826 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 STARD3NLO95772 234 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
NEB-213ENST00000484968 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
NEB-213ENST00000484968 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
NEB-213ENST00000484968 NOB1Q9ULX3 412 aaKnown RBP12.03□□□□□ -0.48
NEB-213ENST00000484968 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
NEB-213ENST00000484968 CNTNAP4Q9C0A0 1308 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
NEB-213ENST00000484968 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.48
NEB-213ENST00000484968 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.48
NEB-213ENST00000484968 BAG6P46379 1132 aa12.02□□□□□ -0.49
NEB-213ENST00000484968 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
NEB-213ENST00000484968 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
NEB-213ENST00000484968 COPS6Q7L5N1 327 aa12.02□□□□□ -0.49
NEB-213ENST00000484968 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
NEB-213ENST00000484968 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
NEB-213ENST00000484968 RLBP1P12271 317 aa12.01□□□□□ -0.49
NEB-213ENST00000484968 FLIIQ13045 1269 aa12.01□□□□□ -0.49
NEB-213ENST00000484968 ERBB4Q15303 1308 aa12.01□□□□□ -0.49
NEB-213ENST00000484968 ADCY9O60503 1353 aa12.01□□□□□ -0.49
NEB-213ENST00000484968 F6X3S4 739 aa12□□□□□ -0.49
NEB-213ENST00000484968 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
NEB-213ENST00000484968 AIMP1Q12904 312 aaKnown RBP12□□□□□ -0.49
NEB-213ENST00000484968 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
NEB-213ENST00000484968 STK31Q9BXU1 1019 aa12□□□□□ -0.49
NEB-213ENST00000484968 HYPKQ9NX55 129 aa12□□□□□ -0.49
NEB-213ENST00000484968 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
NEB-213ENST00000484968 GNPATO15228 680 aa11.99□□□□□ -0.49
NEB-213ENST00000484968 CENPBP07199 599 aaPredicted RBP11.99□□□□□ -0.49
NEB-213ENST00000484968 TRIM27P14373 513 aa11.99□□□□□ -0.49
NEB-213ENST00000484968 RRP1P56182 461 aaKnown RBP11.99□□□□□ -0.49
NEB-213ENST00000484968 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
NEB-213ENST00000484968 PDGFDQ9GZP0 370 aaPredicted RBP11.99□□□□□ -0.49
NEB-213ENST00000484968 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
NEB-213ENST00000484968 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
NEB-213ENST00000484968 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
NEB-213ENST00000484968 HLFQ16534 295 aa11.98□□□□□ -0.49
NEB-213ENST00000484968 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
NEB-213ENST00000484968 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
NEB-213ENST00000484968 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
NEB-213ENST00000484968 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
NEB-213ENST00000484968 COL15A1P39059 1388 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
NEB-213ENST00000484968 PHF14O94880 888 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 SLC15A2Q16348 729 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 ATF7IPQ6VMQ6 1270 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
NEB-213ENST00000484968 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
NEB-213ENST00000484968 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.49
NEB-213ENST00000484968 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
NEB-213ENST00000484968 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
NEB-213ENST00000484968 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
NEB-213ENST00000484968 KSR2Q6VAB6 950 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms