RNA–Protein interactions for RNA: ENST00000484680.1

GTF3C2-211, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-211ENST00000484680 ERVV-2B6SEH9 535 aa8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 CABP4P57796 275 aa8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 ALDH1L2Q3SY69 923 aa8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 IFNL1Q8IU54 200 aa8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 CHMP4AQ9BY43 222 aa8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 MRC1P22897 1456 aa8.37□□□□□ -1.07
GTF3C2-211ENST00000484680 A0A0G2JS52 829 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 VAMP4O75379 141 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 MYT1Q01538 1121 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 FAM98CQ17RN3 349 aaKnown RBP8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 TSPYL6Q8N831 410 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 C8orf58Q8NAV2 365 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
GTF3C2-211ENST00000484680 SIPA1L3O60292 1781 aaPredicted RBP8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 BCAR3O75815 825 aa8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 FKBP8Q14318 412 aa8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 ZNF772Q68DY9 489 aaPredicted RBP8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 TTC5Q8N0Z6 440 aa8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 ATRNO75882 1429 aa8.35□□□□□ -1.07
GTF3C2-211ENST00000484680 KIF16BQ96L93 1317 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 IPO8O15397 1037 aaKnown RBP8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 HOXB7P09629 217 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 MS4A1P11836 297 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 EIF4A1P60842 406 aaKnown RBP8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 ERICH6BQ5W0A0 696 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 FRAT1Q92837 279 aaPredicted RBP8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 TMOD3Q9NYL9 352 aa8.34□□□□□ -1.07
GTF3C2-211ENST00000484680 PLIN1O60240 522 aa8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 GLI3P10071 1580 aa8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 KRT24Q2M2I5 525 aa8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 CCDC30Q5VVM6 783 aa8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 ZKSCAN2Q63HK3 967 aa8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 STK31Q9BXU1 1019 aa8.33□□□□□ -1.08
GTF3C2-211ENST00000484680 KCNQ3O43525 872 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 PDE3AQ14432 1141 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 MRPL50Q8N5N7 158 aaKnown RBP8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 MARCH10Q8NA82 808 aaPredicted RBP8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 SYTL4Q96C24 671 aaPredicted RBP8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 TMEM106CQ9BVX2 250 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 TOGARAM1Q9Y4F4 1720 aa8.32□□□□□ -1.08
GTF3C2-211ENST00000484680 GIGYF1O75420 1035 aaPredicted RBP8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 IRX5P78411 483 aaPredicted RBP8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 ATF7IPQ6VMQ6 1270 aa8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 FTSJ3Q8IY81 847 aaKnown RBP8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 ARHGAP45Q92619 1136 aa8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 NOB1Q9ULX3 412 aaKnown RBP8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 HEG1Q9ULI3 1381 aa8.31□□□□□ -1.08
GTF3C2-211ENST00000484680 BCL9O00512 1426 aa8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 DOT1LQ8TEK3 1739 aa8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 TCERG1O14776 1098 aaKnown RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 SNRPA1P09661 255 aaKnown RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 EIF2S2P20042 333 aaKnown RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 PRIM1P49642 420 aaKnown RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 RBM6P78332 1123 aaKnown RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 SEPT12Q8IYM1 358 aa8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 PIGBQ92521 554 aa8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 ZNF496Q96IT1 587 aaPredicted RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 API5Q9BZZ5 524 aaKnown RBP8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 ITGB4P16144 1822 aa8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 CACNA1FO60840 1977 aa8.3□□□□□ -1.08
GTF3C2-211ENST00000484680 PTPRCP08575 1304 aa8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 PAPPAQ13219 1627 aa8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 TRIM27P14373 513 aa8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 DZIP1LQ8IYY4 767 aaKnown RBP8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 ACSBG1Q96GR2 724 aa8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 DBF4Q9UBU7 674 aaPredicted RBP8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 KAT6BQ8WYB5 2073 aa8.29□□□□□ -1.08
GTF3C2-211ENST00000484680 UBR2Q8IWV8 1755 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 PTCD1O75127 700 aaKnown RBP8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 C20orf194Q5TEA3 1177 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 SLAIN1Q8ND83 568 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 CRBNQ96SW2 442 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 ATG3Q9NT62 314 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 ASAP1Q9ULH1 1129 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 KCPQ6ZWJ8 1503 aa8.28□□□□□ -1.08
GTF3C2-211ENST00000484680 PLCG2P16885 1265 aa8.27□□□□□ -1.09
GTF3C2-211ENST00000484680 RXRBP28702 533 aa8.27□□□□□ -1.09
GTF3C2-211ENST00000484680 FLIIQ13045 1269 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms