RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 GDF2Q9UK05 429 aaPredicted RBP7.88□□□□□ -1.15
VPS13A-211ENST00000484581 ATXN7L1Q9ULK2 861 aaPredicted RBP7.88□□□□□ -1.15
VPS13A-211ENST00000484581 STAU1O95793 577 aaKnown RBP7.87□□□□□ -1.15
VPS13A-211ENST00000484581 Q8N3U1 123 aa7.87□□□□□ -1.15
VPS13A-211ENST00000484581 RRAGCQ9HB90 399 aa7.87□□□□□ -1.15
VPS13A-211ENST00000484581 POM121CA8CG34 1229 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 INHAP05111 366 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 PLA2G4AP47712 749 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 GDF10P55107 478 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 PDE4CQ08493 712 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 GOLGA6L1Q8N7Z2 621 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 AIDAQ96BJ3 306 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
VPS13A-211ENST00000484581 CHIC2Q9UKJ5 165 aa7.86□□□□□ -1.15
VPS13A-211ENST00000484581 SOX11P35716 441 aa7.85□□□□□ -1.15
VPS13A-211ENST00000484581 FIGNL1Q6PIW4 674 aa7.85□□□□□ -1.15
VPS13A-211ENST00000484581 AEBP1Q8IUX7 1158 aa7.85□□□□□ -1.15
VPS13A-211ENST00000484581 PLPP7Q8NBV4 271 aa7.85□□□□□ -1.15
VPS13A-211ENST00000484581 ABHD17AQ96GS6 310 aa7.85□□□□□ -1.15
VPS13A-211ENST00000484581 MKL2Q9ULH7 1088 aa7.85□□□□□ -1.15
VPS13A-211ENST00000484581 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-211ENST00000484581 FGFR3P22607 806 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 AMPD1P23109 780 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 SCNN1DP51172 638 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 SMTNP53814 917 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 SNRPNP63162 240 aaKnown RBP7.84□□□□□ -1.15
VPS13A-211ENST00000484581 UBAP2LQ14157 1087 aaKnown RBP7.84□□□□□ -1.15
VPS13A-211ENST00000484581 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
VPS13A-211ENST00000484581 SHISA8B8ZZ34 492 aa7.83□□□□□ -1.16
VPS13A-211ENST00000484581 BNIP3LO60238 219 aa7.83□□□□□ -1.16
VPS13A-211ENST00000484581 BAG6P46379 1132 aa7.83□□□□□ -1.16
VPS13A-211ENST00000484581 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
VPS13A-211ENST00000484581 SERTAD1Q9UHV2 236 aa7.83□□□□□ -1.16
VPS13A-211ENST00000484581 PCDHGC4Q9Y5F7 938 aa7.83□□□□□ -1.16
VPS13A-211ENST00000484581 ACIN1Q9UKV3 1341 aaKnown RBP7.82□□□□□ -1.16
VPS13A-211ENST00000484581 C2CD2LO14523 706 aa7.82□□□□□ -1.16
VPS13A-211ENST00000484581 CTBSQ01459 385 aa7.82□□□□□ -1.16
VPS13A-211ENST00000484581 ARSJQ5FYB0 599 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-211ENST00000484581 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-211ENST00000484581 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
VPS13A-211ENST00000484581 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
VPS13A-211ENST00000484581 KRBA1A5PL33 1030 aa7.81□□□□□ -1.16
VPS13A-211ENST00000484581 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
VPS13A-211ENST00000484581 NLRP8Q86W28 1048 aa7.81□□□□□ -1.16
VPS13A-211ENST00000484581 NDFIP2Q9NV92 336 aa7.81□□□□□ -1.16
VPS13A-211ENST00000484581 GGA1Q9UJY5 639 aa7.81□□□□□ -1.16
VPS13A-211ENST00000484581 PATL2C9JE40 543 aaKnown RBP7.8□□□□□ -1.16
VPS13A-211ENST00000484581 PIK3R2O00459 728 aa7.8□□□□□ -1.16
VPS13A-211ENST00000484581 CDK2AP1O14519 115 aa7.8□□□□□ -1.16
VPS13A-211ENST00000484581 ATXN7O15265 892 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-211ENST00000484581 TATP17735 454 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-211ENST00000484581 ALYREFQ86V81 257 aaKnown RBP7.8□□□□□ -1.16
VPS13A-211ENST00000484581 GJA3Q9Y6H8 435 aa7.8□□□□□ -1.16
VPS13A-211ENST00000484581 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 FURINP09958 794 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 TMCO4Q5TGY1 634 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 SLCO4C1Q6ZQN7 724 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 ADAMTS19Q8TE59 1207 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 SLC4A9Q96Q91 983 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 CABP1Q9NZU7 370 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 USTQ9Y2C2 406 aa7.79□□□□□ -1.16
VPS13A-211ENST00000484581 A6NJY4 79 aa7.78□□□□□ -1.16
VPS13A-211ENST00000484581 ARAFP10398 606 aa7.78□□□□□ -1.16
VPS13A-211ENST00000484581 EML3Q32P44 896 aa7.78□□□□□ -1.16
VPS13A-211ENST00000484581 HDGFL1Q5TGJ6 251 aa7.78□□□□□ -1.16
VPS13A-211ENST00000484581 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
VPS13A-211ENST00000484581 NEURL1BA8MQ27 555 aa7.77□□□□□ -1.17
VPS13A-211ENST00000484581 BACH1O14867 736 aa7.77□□□□□ -1.17
VPS13A-211ENST00000484581 SKIP12755 728 aa7.77□□□□□ -1.17
VPS13A-211ENST00000484581 ATP4AP20648 1035 aa7.77□□□□□ -1.17
VPS13A-211ENST00000484581 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
VPS13A-211ENST00000484581 NOD1Q9Y239 953 aa7.77□□□□□ -1.17
VPS13A-211ENST00000484581 DCDC2BA2VCK2 349 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 KHNYNO15037 678 aaKnown RBP7.76□□□□□ -1.17
VPS13A-211ENST00000484581 LZTS3O60299 673 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-211ENST00000484581 MAPTP10636 758 aaKnown RBP7.76□□□□□ -1.17
VPS13A-211ENST00000484581 EPXP11678 715 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 PSME1Q06323 249 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 CFAP70Q5T0N1 1121 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 BICDL1Q6ZP65 573 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 ZDHHC3Q9NYG2 299 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
VPS13A-211ENST00000484581 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 GNB5O14775 395 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 COL8A1P27658 744 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 ADH6P28332 368 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 TNP2Q05952 138 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 KCNA1Q09470 495 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 MTFR1Q15390 333 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 PRR12Q9ULL5 1215 aa7.75□□□□□ -1.17
VPS13A-211ENST00000484581 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-211ENST00000484581 CD33P20138 364 aa7.74□□□□□ -1.17
VPS13A-211ENST00000484581 GTF2IP78347 998 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms