RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.54
LDLRAP1-205ENST00000484476 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
LDLRAP1-205ENST00000484476 WDR43Q15061 677 aaKnown RBP eCLIP18.4■□□□□ 0.54
LDLRAP1-205ENST00000484476 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
LDLRAP1-205ENST00000484476 COL15A1P39059 1388 aa18.4■□□□□ 0.54
LDLRAP1-205ENST00000484476 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
LDLRAP1-205ENST00000484476 DCTN1Q14203 1278 aa18.39■□□□□ 0.53
LDLRAP1-205ENST00000484476 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
LDLRAP1-205ENST00000484476 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 NPHP1O15259 732 aa18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 ZNF784Q8NCA9 323 aaPredicted RBP18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 WWC3Q9ULE0 1092 aa18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
LDLRAP1-205ENST00000484476 TM4SF1P30408 202 aa18.37■□□□□ 0.53
LDLRAP1-205ENST00000484476 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
LDLRAP1-205ENST00000484476 ADAMTS7Q9UKP4 1686 aa18.37■□□□□ 0.53
LDLRAP1-205ENST00000484476 KCNQ3O43525 872 aa18.36■□□□□ 0.53
LDLRAP1-205ENST00000484476 PLEKHF1Q96S99 279 aa18.36■□□□□ 0.53
LDLRAP1-205ENST00000484476 PIM2Q9P1W9 311 aa18.36■□□□□ 0.53
LDLRAP1-205ENST00000484476 A1BGP04217 495 aa18.35■□□□□ 0.53
LDLRAP1-205ENST00000484476 DPEP1P16444 411 aa18.35■□□□□ 0.53
LDLRAP1-205ENST00000484476 RIPK4P57078 832 aa18.35■□□□□ 0.53
LDLRAP1-205ENST00000484476 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
LDLRAP1-205ENST00000484476 TJP1Q07157 1748 aa18.35■□□□□ 0.53
LDLRAP1-205ENST00000484476 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 POLRMTO00411 1230 aaKnown RBP18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 DDR1Q08345 913 aa18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 NFIXQ14938 502 aa18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 ZNF652Q9Y2D9 606 aa18.34■□□□□ 0.53
LDLRAP1-205ENST00000484476 SERPINB2P05120 415 aa18.33■□□□□ 0.52
LDLRAP1-205ENST00000484476 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
LDLRAP1-205ENST00000484476 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
LDLRAP1-205ENST00000484476 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
LDLRAP1-205ENST00000484476 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
LDLRAP1-205ENST00000484476 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
LDLRAP1-205ENST00000484476 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
LDLRAP1-205ENST00000484476 C4AP0C0L4 1744 aa18.31■□□□□ 0.52
LDLRAP1-205ENST00000484476 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 CHD4Q14839 1912 aa18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 H0YIN7 160 aa18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 NEUROD2Q15784 382 aa18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
LDLRAP1-205ENST00000484476 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
LDLRAP1-205ENST00000484476 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
LDLRAP1-205ENST00000484476 UTRNP46939 3433 aa18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 UBR2Q8IWV8 1755 aa18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 PDE6BP35913 854 aa18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 CLEC4GQ6UXB4 293 aa18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 THUMPD2Q9BTF0 503 aaKnown RBP18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 BABAM1Q9NWV8 329 aa18.28■□□□□ 0.52
LDLRAP1-205ENST00000484476 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 CHRNA5P30532 468 aa18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 ST5P78524 1137 aa18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 TBC1D9BQ66K14 1250 aa18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
LDLRAP1-205ENST00000484476 CARMIL3Q8ND23 1372 aa18.27■□□□□ 0.51
LDLRAP1-205ENST00000484476 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
LDLRAP1-205ENST00000484476 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
LDLRAP1-205ENST00000484476 CNBD1Q8NA66 436 aa18.26■□□□□ 0.51
LDLRAP1-205ENST00000484476 ADAMTS8Q9UP79 889 aa18.26■□□□□ 0.51
LDLRAP1-205ENST00000484476 CAMTA2O94983 1202 aa18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 PIP4K2AP48426 406 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 NBPF5PQ86XG9 351 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 BRIP1Q9BX63 1249 aa18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-205ENST00000484476 RGL2O15211 777 aa18.24■□□□□ 0.51
LDLRAP1-205ENST00000484476 KCNA3P22001 575 aa18.24■□□□□ 0.51
LDLRAP1-205ENST00000484476 TPTE2Q6XPS3 522 aa18.24■□□□□ 0.51
LDLRAP1-205ENST00000484476 TTLL6Q8N841 843 aa18.24■□□□□ 0.51
LDLRAP1-205ENST00000484476 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
LDLRAP1-205ENST00000484476 ZNF622Q969S3 477 aaKnown RBP eCLIP18.23■□□□□ 0.51
LDLRAP1-205ENST00000484476 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-205ENST00000484476 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
LDLRAP1-205ENST00000484476 ZNF526Q8TF50 670 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-205ENST00000484476 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
LDLRAP1-205ENST00000484476 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
LDLRAP1-205ENST00000484476 MYL6BP14649 208 aa18.21■□□□□ 0.51
LDLRAP1-205ENST00000484476 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
LDLRAP1-205ENST00000484476 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
LDLRAP1-205ENST00000484476 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
LDLRAP1-205ENST00000484476 ANP32CO43423 234 aa18.2■□□□□ 0.5
LDLRAP1-205ENST00000484476 PRR5LQ6MZQ0 368 aa18.2■□□□□ 0.5
LDLRAP1-205ENST00000484476 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
LDLRAP1-205ENST00000484476 ERBB4Q15303 1308 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms