RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 TJP1Q07157 1748 aa18.29■□□□□ 0.52
HDLBP-240ENST00000484412 GNPATO15228 680 aa18.28■□□□□ 0.52
HDLBP-240ENST00000484412 EIF5P55010 431 aaKnown RBP18.28■□□□□ 0.52
HDLBP-240ENST00000484412 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
HDLBP-240ENST00000484412 AMIGO3Q86WK7 504 aa18.28■□□□□ 0.52
HDLBP-240ENST00000484412 THUMPD2Q9BTF0 503 aaKnown RBP18.28■□□□□ 0.52
HDLBP-240ENST00000484412 RRP7AQ9Y3A4 280 aaKnown RBP18.28■□□□□ 0.52
HDLBP-240ENST00000484412 RGL2O15211 777 aa18.27■□□□□ 0.52
HDLBP-240ENST00000484412 IL6STP40189 918 aaPredicted RBP18.27■□□□□ 0.52
HDLBP-240ENST00000484412 NLGN1Q8N2Q7 840 aa18.27■□□□□ 0.52
HDLBP-240ENST00000484412 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.52
HDLBP-240ENST00000484412 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
HDLBP-240ENST00000484412 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
HDLBP-240ENST00000484412 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
HDLBP-240ENST00000484412 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
HDLBP-240ENST00000484412 SOS1Q07889 1333 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-240ENST00000484412 IL16Q14005 1332 aa18.25■□□□□ 0.51
HDLBP-240ENST00000484412 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
HDLBP-240ENST00000484412 GNAI1P63096 354 aa18.25■□□□□ 0.51
HDLBP-240ENST00000484412 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
HDLBP-240ENST00000484412 A0A087WZG4 1122 aa18.24■□□□□ 0.51
HDLBP-240ENST00000484412 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
HDLBP-240ENST00000484412 HOXB7P09629 217 aa18.24■□□□□ 0.51
HDLBP-240ENST00000484412 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
HDLBP-240ENST00000484412 RFC4P35249 363 aa18.23■□□□□ 0.51
HDLBP-240ENST00000484412 NARFQ9UHQ1 456 aa18.23■□□□□ 0.51
HDLBP-240ENST00000484412 ATF5Q9Y2D1 282 aaPredicted RBP18.23■□□□□ 0.51
HDLBP-240ENST00000484412 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
HDLBP-240ENST00000484412 FAM9BQ8IZU0 186 aa18.22■□□□□ 0.51
HDLBP-240ENST00000484412 A1BGP04217 495 aa18.21■□□□□ 0.51
HDLBP-240ENST00000484412 GYS1P13807 737 aa18.21■□□□□ 0.51
HDLBP-240ENST00000484412 POLD1P28340 1107 aa18.21■□□□□ 0.51
HDLBP-240ENST00000484412 CHMP4AQ9BY43 222 aa18.21■□□□□ 0.51
HDLBP-240ENST00000484412 TM4SF1P30408 202 aa18.2■□□□□ 0.5
HDLBP-240ENST00000484412 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
HDLBP-240ENST00000484412 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
HDLBP-240ENST00000484412 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
HDLBP-240ENST00000484412 ARXQ96QS3 562 aa18.19■□□□□ 0.5
HDLBP-240ENST00000484412 NBPF26B4DH59 902 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 PHF14O94880 888 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
HDLBP-240ENST00000484412 NBPF10Q6P3W6 841 aaKnown RBP18.18■□□□□ 0.5
HDLBP-240ENST00000484412 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 MIER1Q8N108 512 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 NBPF15Q8N660 670 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
HDLBP-240ENST00000484412 MSH5O43196 834 aa18.17■□□□□ 0.5
HDLBP-240ENST00000484412 ZPR1O75312 459 aa18.17■□□□□ 0.5
HDLBP-240ENST00000484412 COL15A1P39059 1388 aa18.17■□□□□ 0.5
HDLBP-240ENST00000484412 PDIA6Q15084 440 aa18.16■□□□□ 0.5
HDLBP-240ENST00000484412 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
HDLBP-240ENST00000484412 BCL2L12Q9HB09 334 aa18.16■□□□□ 0.5
HDLBP-240ENST00000484412 ERVV-1B6SEH8 477 aa18.15■□□□□ 0.5
HDLBP-240ENST00000484412 SYT17Q9BSW7 474 aa18.15■□□□□ 0.5
HDLBP-240ENST00000484412 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
HDLBP-240ENST00000484412 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
HDLBP-240ENST00000484412 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
HDLBP-240ENST00000484412 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
HDLBP-240ENST00000484412 PPP1R1BQ9UD71 204 aaPredicted RBP18.13■□□□□ 0.49
HDLBP-240ENST00000484412 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
HDLBP-240ENST00000484412 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
HDLBP-240ENST00000484412 FKBP8Q14318 412 aa18.12■□□□□ 0.49
HDLBP-240ENST00000484412 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
HDLBP-240ENST00000484412 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
HDLBP-240ENST00000484412 SRP68Q9UHB9 627 aaKnown RBP18.11■□□□□ 0.49
HDLBP-240ENST00000484412 C4AP0C0L4 1744 aa18.11■□□□□ 0.49
HDLBP-240ENST00000484412 LAMB4A4D0S4 1761 aa18.11■□□□□ 0.49
HDLBP-240ENST00000484412 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
HDLBP-240ENST00000484412 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
HDLBP-240ENST00000484412 MMP10P09238 476 aa18.09■□□□□ 0.49
HDLBP-240ENST00000484412 TGFB2P61812 414 aa18.09■□□□□ 0.49
HDLBP-240ENST00000484412 FHDC1Q9C0D6 1143 aaPredicted RBP18.09■□□□□ 0.49
HDLBP-240ENST00000484412 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
HDLBP-240ENST00000484412 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
HDLBP-240ENST00000484412 EIF2S2P20042 333 aaKnown RBP18.08■□□□□ 0.48
HDLBP-240ENST00000484412 NFIXQ14938 502 aa18.08■□□□□ 0.48
HDLBP-240ENST00000484412 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
HDLBP-240ENST00000484412 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
HDLBP-240ENST00000484412 TRMT2AQ8IZ69 625 aaKnown RBP18.08■□□□□ 0.48
HDLBP-240ENST00000484412 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
HDLBP-240ENST00000484412 HYPKQ9NX55 129 aa18.08■□□□□ 0.48
HDLBP-240ENST00000484412 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
HDLBP-240ENST00000484412 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
HDLBP-240ENST00000484412 ZNF652Q9Y2D9 606 aa18.07■□□□□ 0.48
HDLBP-240ENST00000484412 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
HDLBP-240ENST00000484412 VAMP4O75379 141 aa18.06■□□□□ 0.48
HDLBP-240ENST00000484412 CCDC30Q5VVM6 783 aa18.06■□□□□ 0.48
HDLBP-240ENST00000484412 GIGYF2Q6Y7W6 1299 aaKnown RBP18.06■□□□□ 0.48
HDLBP-240ENST00000484412 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
HDLBP-240ENST00000484412 DDR1Q08345 913 aa18.05■□□□□ 0.48
HDLBP-240ENST00000484412 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
HDLBP-240ENST00000484412 E9PSI1 815 aa18.04■□□□□ 0.48
HDLBP-240ENST00000484412 SERPINB2P05120 415 aa18.04■□□□□ 0.48
HDLBP-240ENST00000484412 PIP4K2AP48426 406 aaPredicted RBP18.04■□□□□ 0.48
HDLBP-240ENST00000484412 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
HDLBP-240ENST00000484412 TBC1D9BQ66K14 1250 aa18.04■□□□□ 0.48
HDLBP-240ENST00000484412 TSPYL6Q8N831 410 aa18.04■□□□□ 0.48
HDLBP-240ENST00000484412 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
HDLBP-240ENST00000484412 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms