RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
NCL-209ENST00000484328 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
NCL-209ENST00000484328 BAG6P46379 1132 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 EXOSC9Q06265 439 aaKnown RBP8.33□□□□□ -1.08
NCL-209ENST00000484328 TXNRD1Q16881 649 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 COL24A1Q17RW2 1714 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 LRRC4BQ9NT99 713 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
NCL-209ENST00000484328 ANKRD36CQ5JPF3 1778 aa8.33□□□□□ -1.08
NCL-209ENST00000484328 ERBB4Q15303 1308 aa8.32□□□□□ -1.08
NCL-209ENST00000484328 PRAMEF22A3QJZ6 481 aa8.32□□□□□ -1.08
NCL-209ENST00000484328 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
NCL-209ENST00000484328 ATP6V1AP38606 617 aa8.32□□□□□ -1.08
NCL-209ENST00000484328 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
NCL-209ENST00000484328 TWISTNBQ3B726 338 aaPredicted RBP8.32□□□□□ -1.08
NCL-209ENST00000484328 TSPYL6Q8N831 410 aa8.32□□□□□ -1.08
NCL-209ENST00000484328 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
NCL-209ENST00000484328 RBM42Q9BTD8 480 aaKnown RBP8.32□□□□□ -1.08
NCL-209ENST00000484328 TEX13AQ9BXU3 409 aaPredicted RBP8.32□□□□□ -1.08
NCL-209ENST00000484328 VAMP4O75379 141 aa8.31□□□□□ -1.08
NCL-209ENST00000484328 EN1Q05925 392 aaPredicted RBP8.31□□□□□ -1.08
NCL-209ENST00000484328 C1QBPQ07021 282 aaKnown RBP8.31□□□□□ -1.08
NCL-209ENST00000484328 EZH2Q15910 746 aaKnown RBP8.31□□□□□ -1.08
NCL-209ENST00000484328 LRP10Q7Z4F1 713 aa8.31□□□□□ -1.08
NCL-209ENST00000484328 DEFB132Q7Z7B7 95 aa8.31□□□□□ -1.08
NCL-209ENST00000484328 DNAJC10Q8IXB1 793 aa8.31□□□□□ -1.08
NCL-209ENST00000484328 ZNF428Q96B54 188 aa8.31□□□□□ -1.08
NCL-209ENST00000484328 HMGB2P26583 209 aaKnown RBP8.3□□□□□ -1.08
NCL-209ENST00000484328 CRKLP46109 303 aaKnown RBP8.3□□□□□ -1.08
NCL-209ENST00000484328 KCNQ4P56696 695 aa8.3□□□□□ -1.08
NCL-209ENST00000484328 PDIA6Q15084 440 aa8.3□□□□□ -1.08
NCL-209ENST00000484328 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
NCL-209ENST00000484328 INTS5Q6P9B9 1019 aaKnown RBP8.3□□□□□ -1.08
NCL-209ENST00000484328 AKT1S1Q96B36 256 aa8.3□□□□□ -1.08
NCL-209ENST00000484328 USP16Q9Y5T5 823 aa8.3□□□□□ -1.08
NCL-209ENST00000484328 NBPF26B4DH59 902 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 STARD3NLO95772 234 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 HDGFL1Q5TGJ6 251 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 NBPF14Q5TI25 921 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
NCL-209ENST00000484328 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 CHMP4AQ9BY43 222 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
NCL-209ENST00000484328 CCDC87Q9NVE4 849 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 ZBTB1Q9Y2K1 713 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 NUP98P52948 1817 aa8.29□□□□□ -1.08
NCL-209ENST00000484328 PXDNLA1KZ92 1463 aa8.28□□□□□ -1.08
NCL-209ENST00000484328 COL15A1P39059 1388 aa8.28□□□□□ -1.08
NCL-209ENST00000484328 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
NCL-209ENST00000484328 IL6STP40189 918 aaPredicted RBP8.28□□□□□ -1.08
NCL-209ENST00000484328 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
NCL-209ENST00000484328 ZNF827Q17R98 1081 aa8.28□□□□□ -1.08
NCL-209ENST00000484328 ALDH1L2Q3SY69 923 aa8.28□□□□□ -1.08
NCL-209ENST00000484328 AMIGO3Q86WK7 504 aa8.28□□□□□ -1.08
NCL-209ENST00000484328 DDX21Q9NR30 783 aaKnown RBP eCLIP8.28□□□□□ -1.08
NCL-209ENST00000484328 CHPF2Q9P2E5 772 aa8.28□□□□□ -1.08
NCL-209ENST00000484328 DBF4Q9UBU7 674 aaPredicted RBP8.28□□□□□ -1.08
NCL-209ENST00000484328 NRXN2Q9P2S2 1712 aa8.27□□□□□ -1.09
NCL-209ENST00000484328 RPS6KA4O75676 772 aa8.27□□□□□ -1.09
NCL-209ENST00000484328 A1BGP04217 495 aa8.27□□□□□ -1.09
NCL-209ENST00000484328 RARSP54136 660 aaKnown RBP8.27□□□□□ -1.09
NCL-209ENST00000484328 EIF5P55010 431 aaKnown RBP8.27□□□□□ -1.09
NCL-209ENST00000484328 PROSER3Q2NL68 480 aa8.27□□□□□ -1.09
NCL-209ENST00000484328 CCDC30Q5VVM6 783 aa8.27□□□□□ -1.09
NCL-209ENST00000484328 LAMB2P55268 1798 aa8.27□□□□□ -1.09
NCL-209ENST00000484328 AFDNP55196 1824 aaKnown RBP8.26□□□□□ -1.09
NCL-209ENST00000484328 SOCS7O14512 581 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 RGL2O15211 777 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 GNPATO15228 680 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 EIF2S2P20042 333 aaKnown RBP8.26□□□□□ -1.09
NCL-209ENST00000484328 SSFA2P28290 1259 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 AK7Q96M32 723 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 HYPKQ9NX55 129 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 KIF16BQ96L93 1317 aa8.26□□□□□ -1.09
NCL-209ENST00000484328 PIP4K2AP48426 406 aaPredicted RBP8.25□□□□□ -1.09
NCL-209ENST00000484328 SLC15A2Q16348 729 aa8.25□□□□□ -1.09
NCL-209ENST00000484328 MRPL50Q8N5N7 158 aaKnown RBP8.25□□□□□ -1.09
NCL-209ENST00000484328 NECTIN2Q92692 538 aa8.25□□□□□ -1.09
NCL-209ENST00000484328 STK31Q9BXU1 1019 aa8.25□□□□□ -1.09
NCL-209ENST00000484328 RTCBQ9Y3I0 505 aaKnown RBP8.25□□□□□ -1.09
NCL-209ENST00000484328 ATP10DQ9P241 1426 aa8.25□□□□□ -1.09
NCL-209ENST00000484328 ADCY9O60503 1353 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 IBTKQ9P2D0 1353 aaPredicted RBP8.24□□□□□ -1.09
NCL-209ENST00000484328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
NCL-209ENST00000484328 ANXA1P04083 346 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 SLC4A2P04920 1241 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 MYL6BP14649 208 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 CANXP27824 592 aaKnown RBP8.24□□□□□ -1.09
NCL-209ENST00000484328 HOXD11P31277 338 aaPredicted RBP8.24□□□□□ -1.09
NCL-209ENST00000484328 FLIIQ13045 1269 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 PPP4R3CPQ6ZMV5 832 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 PHAXQ9H814 394 aaKnown RBP8.24□□□□□ -1.09
NCL-209ENST00000484328 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 STK32BQ9NY57 414 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 RCAN3Q9UKA8 241 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 PTPRCP08575 1304 aa8.24□□□□□ -1.09
NCL-209ENST00000484328 USP42Q9H9J4 1324 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms