RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 RNF8O76064 485 aa11.01□□□□□ -0.65
ALMS1-204ENST00000484298 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
ALMS1-204ENST00000484298 UBTFL1P0CB47 393 aaPredicted RBP11.01□□□□□ -0.65
ALMS1-204ENST00000484298 SNW1Q13573 536 aaKnown RBP11.01□□□□□ -0.65
ALMS1-204ENST00000484298 PCK1P35558 622 aa11.01□□□□□ -0.65
ALMS1-204ENST00000484298 PRPHP41219 470 aa11.01□□□□□ -0.65
ALMS1-204ENST00000484298 MIER3Q7Z3K6 550 aa11.01□□□□□ -0.65
ALMS1-204ENST00000484298 CCDC172P0C7W6 258 aa11.01□□□□□ -0.65
ALMS1-204ENST00000484298 PPP4R3AQ6IN85 833 aa11□□□□□ -0.65
ALMS1-204ENST00000484298 SCAND2PQ9GZW5 306 aaPredicted RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 MRPS9P82933 396 aaKnown RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 CLNS1AP54105 237 aaKnown RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
ALMS1-204ENST00000484298 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
ALMS1-204ENST00000484298 GNL3LQ9NVN8 582 aaKnown RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 ZSCAN31Q96LW9 406 aaPredicted RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 NCAPGQ9BPX3 1015 aa11□□□□□ -0.65
ALMS1-204ENST00000484298 BUB1BO60566 1050 aaPredicted RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 JAKMIP2Q96AA8 810 aa11□□□□□ -0.65
ALMS1-204ENST00000484298 RAB3IPQ96QF0 476 aaPredicted RBP11□□□□□ -0.65
ALMS1-204ENST00000484298 FLIIQ13045 1269 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 LRCH2Q5VUJ6 765 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 DNAJC8O75937 253 aaPredicted RBP10.99□□□□□ -0.65
ALMS1-204ENST00000484298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.65
ALMS1-204ENST00000484298 ERCC6LQ2NKX8 1250 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 MTUS1Q9ULD2 1270 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 PDE1CQ14123 709 aaPredicted RBP10.99□□□□□ -0.65
ALMS1-204ENST00000484298 COG3Q96JB2 828 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 KRT32Q14532 448 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 CCDC38Q502W7 563 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 ATRIPQ8WXE1 791 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 CCDC94Q9BW85 323 aaPredicted RBP10.99□□□□□ -0.65
ALMS1-204ENST00000484298 TRIM7Q9C029 511 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 PKD2Q13563 968 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 GNAI1P63096 354 aa10.99□□□□□ -0.65
ALMS1-204ENST00000484298 SATB1Q01826 763 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 RAB34Q9BZG1 259 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 ARFGAP2Q8N6H7 521 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 CHMP2AO43633 222 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 TNIP1Q15025 636 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 RBBP5Q15291 538 aaKnown RBP10.98□□□□□ -0.65
ALMS1-204ENST00000484298 CPLX4Q7Z7G2 160 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 NDC80O14777 642 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 CTCFLQ8NI51 663 aaPredicted RBP10.98□□□□□ -0.65
ALMS1-204ENST00000484298 GNAI3P08754 354 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 CCDC129Q6ZRS4 1044 aa10.98□□□□□ -0.65
ALMS1-204ENST00000484298 DDX27Q96GQ7 796 aaKnown RBP10.98□□□□□ -0.65
ALMS1-204ENST00000484298 GON4LQ3T8J9 2241 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ATP2A2P16615 1042 aaKnown RBP10.97□□□□□ -0.65
ALMS1-204ENST00000484298 NEDD9Q14511 834 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ELL2O00472 640 aaPredicted RBP10.97□□□□□ -0.65
ALMS1-204ENST00000484298 TRPC3Q13507 836 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 SRCIN1Q9C0H9 1055 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ARL1P40616 181 aaPredicted RBP10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ARHGAP24Q8N264 748 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ATP5DP30049 168 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 CFAP157Q5JU67 520 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ATP2C2O75185 946 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 MYCBPQ99417 103 aaPredicted RBP10.97□□□□□ -0.65
ALMS1-204ENST00000484298 EID1Q9Y6B2 187 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 ARHGAP25P42331 645 aa10.97□□□□□ -0.65
ALMS1-204ENST00000484298 TDRD12Q587J7 1177 aaKnown RBP10.97□□□□□ -0.65
ALMS1-204ENST00000484298 MCM4P33991 863 aa10.96□□□□□ -0.65
ALMS1-204ENST00000484298 CHMP4BP1P59074 171 aa10.96□□□□□ -0.65
ALMS1-204ENST00000484298 PDCD7Q8N8D1 485 aaKnown RBP10.96□□□□□ -0.65
ALMS1-204ENST00000484298 MAP2K2P36507 400 aa10.96□□□□□ -0.65
ALMS1-204ENST00000484298 MCM6Q14566 821 aa10.96□□□□□ -0.65
ALMS1-204ENST00000484298 SELENOOQ9BVL4 669 aa10.96□□□□□ -0.65
ALMS1-204ENST00000484298 PYM1Q9BRP8 204 aaKnown RBP10.96□□□□□ -0.65
ALMS1-204ENST00000484298 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 NUP155O75694 1391 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 SSBP05455 408 aaKnown RBP eCLIP10.96□□□□□ -0.66
ALMS1-204ENST00000484298 SNX16P57768 344 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 STX1AQ16623 288 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 BICDL2A1A5D9 508 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 CTAGE9A4FU28 777 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 DBN1Q16643 649 aa10.96□□□□□ -0.66
ALMS1-204ENST00000484298 ERCC3P19447 782 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 IRX4P78413 519 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 PRPF4BQ13523 1007 aaKnown RBP10.95□□□□□ -0.66
ALMS1-204ENST00000484298 RUFY3Q7L099 469 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 LUC7L3O95232 432 aaKnown RBP10.95□□□□□ -0.66
ALMS1-204ENST00000484298 NAA16Q6N069 864 aaPredicted RBP10.95□□□□□ -0.66
ALMS1-204ENST00000484298 FAM76AQ8TAV0 307 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC12Q8WUD4 166 aaPredicted RBP10.95□□□□□ -0.66
ALMS1-204ENST00000484298 FERMT2Q96AC1 680 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 PSMD1Q99460 953 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
ALMS1-204ENST00000484298 XPCQ01831 940 aaPredicted RBP10.95□□□□□ -0.66
ALMS1-204ENST00000484298 INTS8Q75QN2 995 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms