RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 GPR162Q16538 588 aa16.15■□□□□ 0.18
HDLBP-239ENST00000483086 RFC4P35249 363 aa16.14■□□□□ 0.17
HDLBP-239ENST00000483086 TEFQ10587 303 aa16.14■□□□□ 0.17
HDLBP-239ENST00000483086 VSIG10Q8N0Z9 540 aa16.14■□□□□ 0.17
HDLBP-239ENST00000483086 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
HDLBP-239ENST00000483086 COL15A1P39059 1388 aa16.13■□□□□ 0.17
HDLBP-239ENST00000483086 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
HDLBP-239ENST00000483086 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
HDLBP-239ENST00000483086 USPL1Q5W0Q7 1092 aa16.12■□□□□ 0.17
HDLBP-239ENST00000483086 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
HDLBP-239ENST00000483086 LAMB4A4D0S4 1761 aa16.12■□□□□ 0.17
HDLBP-239ENST00000483086 TM4SF1P30408 202 aa16.11■□□□□ 0.17
HDLBP-239ENST00000483086 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
HDLBP-239ENST00000483086 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
HDLBP-239ENST00000483086 ANKRD31Q8N7Z5 1873 aa16.11■□□□□ 0.17
HDLBP-239ENST00000483086 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
HDLBP-239ENST00000483086 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
HDLBP-239ENST00000483086 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-239ENST00000483086 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
HDLBP-239ENST00000483086 RALBP1Q15311 655 aa16.1■□□□□ 0.17
HDLBP-239ENST00000483086 ZNF784Q8NCA9 323 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-239ENST00000483086 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
HDLBP-239ENST00000483086 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
HDLBP-239ENST00000483086 DLEC1Q9Y238 1755 aa16.09■□□□□ 0.17
HDLBP-239ENST00000483086 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
HDLBP-239ENST00000483086 A1BGP04217 495 aa16.09■□□□□ 0.17
HDLBP-239ENST00000483086 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
HDLBP-239ENST00000483086 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
HDLBP-239ENST00000483086 KCNA3P22001 575 aa16.08■□□□□ 0.16
HDLBP-239ENST00000483086 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
HDLBP-239ENST00000483086 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
HDLBP-239ENST00000483086 NFIXQ14938 502 aa16.07■□□□□ 0.16
HDLBP-239ENST00000483086 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
HDLBP-239ENST00000483086 MYBBP1AQ9BQG0 1328 aaKnown RBP16.07■□□□□ 0.16
HDLBP-239ENST00000483086 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
HDLBP-239ENST00000483086 COL11A2P13942 1736 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-239ENST00000483086 DPEP1P16444 411 aa16.06■□□□□ 0.16
HDLBP-239ENST00000483086 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
HDLBP-239ENST00000483086 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
HDLBP-239ENST00000483086 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
HDLBP-239ENST00000483086 STARD3NLO95772 234 aa16.05■□□□□ 0.16
HDLBP-239ENST00000483086 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
HDLBP-239ENST00000483086 NBPF26B4DH59 902 aa16.04■□□□□ 0.16
HDLBP-239ENST00000483086 ZPR1O75312 459 aa16.04■□□□□ 0.16
HDLBP-239ENST00000483086 NBPF10Q6P3W6 841 aaKnown RBP16.04■□□□□ 0.16
HDLBP-239ENST00000483086 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
HDLBP-239ENST00000483086 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
HDLBP-239ENST00000483086 GRIN3BO60391 1043 aa16.03■□□□□ 0.16
HDLBP-239ENST00000483086 CHRNA5P30532 468 aa16.03■□□□□ 0.16
HDLBP-239ENST00000483086 TGFB2P61812 414 aa16.03■□□□□ 0.16
HDLBP-239ENST00000483086 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-239ENST00000483086 TBC1D9BQ66K14 1250 aa16.03■□□□□ 0.16
HDLBP-239ENST00000483086 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
HDLBP-239ENST00000483086 SBF1O95248 1867 aa16.03■□□□□ 0.16
HDLBP-239ENST00000483086 ADCY9O60503 1353 aa16.02■□□□□ 0.16
HDLBP-239ENST00000483086 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
HDLBP-239ENST00000483086 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
HDLBP-239ENST00000483086 IL6STP40189 918 aaPredicted RBP16.02■□□□□ 0.16
HDLBP-239ENST00000483086 ZNF330Q9Y3S2 320 aaPredicted RBP16.02■□□□□ 0.16
HDLBP-239ENST00000483086 NUP98P52948 1817 aa16.01■□□□□ 0.15
HDLBP-239ENST00000483086 CCDC184Q52MB2 194 aa16.01■□□□□ 0.15
HDLBP-239ENST00000483086 BICDL1Q6ZP65 573 aa16.01■□□□□ 0.15
HDLBP-239ENST00000483086 TEX13AQ9BXU3 409 aaPredicted RBP16.01■□□□□ 0.15
HDLBP-239ENST00000483086 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
HDLBP-239ENST00000483086 SERPINB2P05120 415 aa16■□□□□ 0.15
HDLBP-239ENST00000483086 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
HDLBP-239ENST00000483086 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
HDLBP-239ENST00000483086 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
HDLBP-239ENST00000483086 CCDC24Q8N4L8 307 aa16■□□□□ 0.15
HDLBP-239ENST00000483086 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
HDLBP-239ENST00000483086 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
HDLBP-239ENST00000483086 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
HDLBP-239ENST00000483086 BCS1LQ9Y276 419 aa15.99■□□□□ 0.15
HDLBP-239ENST00000483086 ATP10DQ9P241 1426 aa15.99■□□□□ 0.15
HDLBP-239ENST00000483086 GIGYF1O75420 1035 aaPredicted RBP15.98■□□□□ 0.15
HDLBP-239ENST00000483086 RIPK4P57078 832 aa15.98■□□□□ 0.15
HDLBP-239ENST00000483086 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
HDLBP-239ENST00000483086 A0A087WZG4 1122 aa15.97■□□□□ 0.15
HDLBP-239ENST00000483086 DZIP3Q86Y13 1208 aaKnown RBP15.97■□□□□ 0.15
HDLBP-239ENST00000483086 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
HDLBP-239ENST00000483086 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
HDLBP-239ENST00000483086 NEFMP07197 916 aa15.95■□□□□ 0.14
HDLBP-239ENST00000483086 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
HDLBP-239ENST00000483086 HLFQ16534 295 aa15.95■□□□□ 0.14
HDLBP-239ENST00000483086 PRR5LQ6MZQ0 368 aa15.95■□□□□ 0.14
HDLBP-239ENST00000483086 SLX4Q8IY92 1834 aa15.95■□□□□ 0.14
HDLBP-239ENST00000483086 ARFGEF2Q9Y6D5 1785 aa15.95■□□□□ 0.14
HDLBP-239ENST00000483086 KRT24Q2M2I5 525 aa15.94■□□□□ 0.14
HDLBP-239ENST00000483086 LRP10Q7Z4F1 713 aa15.94■□□□□ 0.14
HDLBP-239ENST00000483086 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
HDLBP-239ENST00000483086 PRELPP51888 382 aa15.93■□□□□ 0.14
HDLBP-239ENST00000483086 TTLL7Q6ZT98 887 aa15.93■□□□□ 0.14
HDLBP-239ENST00000483086 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
HDLBP-239ENST00000483086 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
HDLBP-239ENST00000483086 PIM2Q9P1W9 311 aa15.93■□□□□ 0.14
HDLBP-239ENST00000483086 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
HDLBP-239ENST00000483086 PDIA6Q15084 440 aa15.92■□□□□ 0.14
HDLBP-239ENST00000483086 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
HDLBP-239ENST00000483086 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
HDLBP-239ENST00000483086 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms