RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
DDR1-244ENST00000482873 NBPF7P0C2Y1 421 aaPredicted RBP18.54■□□□□ 0.56
DDR1-244ENST00000482873 UBTFL1P0CB47 393 aaPredicted RBP18.54■□□□□ 0.56
DDR1-244ENST00000482873 SLIT1O75093 1534 aa18.54■□□□□ 0.56
DDR1-244ENST00000482873 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
DDR1-244ENST00000482873 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
DDR1-244ENST00000482873 FER1L4A9Z1Z3 1794 aa18.53■□□□□ 0.56
DDR1-244ENST00000482873 SYCE3A1L190 88 aa18.53■□□□□ 0.56
DDR1-244ENST00000482873 MX1P20591 662 aa18.53■□□□□ 0.56
DDR1-244ENST00000482873 ST18O60284 1047 aa18.53■□□□□ 0.56
DDR1-244ENST00000482873 UQCRHLA0A096LP55 91 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 PI4KAP2A4QPH2 592 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 ERC2O15083 957 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.56
DDR1-244ENST00000482873 UQCRHP07919 91 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 GNAI3P08754 354 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 ATP8B2P98198 1209 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 PI4KAP1Q8N8J0 262 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 PALD1Q9ULE6 856 aa18.52■□□□□ 0.56
DDR1-244ENST00000482873 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.55
DDR1-244ENST00000482873 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.55
DDR1-244ENST00000482873 IL25Q9H293 177 aa18.52■□□□□ 0.55
DDR1-244ENST00000482873 DTNBO60941 627 aa18.51■□□□□ 0.55
DDR1-244ENST00000482873 NEK4P51957 841 aa18.51■□□□□ 0.55
DDR1-244ENST00000482873 PPP1R42Q7Z4L9 355 aa18.51■□□□□ 0.55
DDR1-244ENST00000482873 FOXD4L6Q3SYB3 417 aaPredicted RBP18.51■□□□□ 0.55
DDR1-244ENST00000482873 FOXD4L3Q6VB84 417 aaPredicted RBP18.51■□□□□ 0.55
DDR1-244ENST00000482873 IP6K1Q92551 441 aa18.51■□□□□ 0.55
DDR1-244ENST00000482873 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
DDR1-244ENST00000482873 TEFQ10587 303 aa18.5■□□□□ 0.55
DDR1-244ENST00000482873 BTBD11A6QL63 1104 aa18.5■□□□□ 0.55
DDR1-244ENST00000482873 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
DDR1-244ENST00000482873 PRDM4Q9UKN5 801 aa18.5■□□□□ 0.55
DDR1-244ENST00000482873 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
DDR1-244ENST00000482873 REC8O95072 547 aa18.49■□□□□ 0.55
DDR1-244ENST00000482873 UPF3BQ9BZI7 483 aaKnown RBP18.49■□□□□ 0.55
DDR1-244ENST00000482873 EIF4A1P60842 406 aaKnown RBP18.49■□□□□ 0.55
DDR1-244ENST00000482873 RNF214Q8ND24 703 aa18.49■□□□□ 0.55
DDR1-244ENST00000482873 DDX17Q92841 729 aaKnown RBP18.49■□□□□ 0.55
DDR1-244ENST00000482873 NWD1Q149M9 1564 aa18.48■□□□□ 0.55
DDR1-244ENST00000482873 ZC3H6P61129 1189 aaKnown RBP18.48■□□□□ 0.55
DDR1-244ENST00000482873 PROSER3Q2NL68 480 aa18.48■□□□□ 0.55
DDR1-244ENST00000482873 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
DDR1-244ENST00000482873 SRCIN1Q9C0H9 1055 aa18.48■□□□□ 0.55
DDR1-244ENST00000482873 TPRNQ4KMQ1 711 aa18.47■□□□□ 0.55
DDR1-244ENST00000482873 AXIN2Q9Y2T1 843 aa18.47■□□□□ 0.55
DDR1-244ENST00000482873 AIMP1Q12904 312 aaKnown RBP18.47■□□□□ 0.55
DDR1-244ENST00000482873 GCP02774 474 aa18.46■□□□□ 0.55
DDR1-244ENST00000482873 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.55
DDR1-244ENST00000482873 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
DDR1-244ENST00000482873 MAP7D2Q96T17 732 aa18.46■□□□□ 0.55
DDR1-244ENST00000482873 MCM5P33992 734 aa18.46■□□□□ 0.54
DDR1-244ENST00000482873 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.54
DDR1-244ENST00000482873 CHMLP26374 656 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 CWF19L2Q2TBE0 894 aaKnown RBP18.45■□□□□ 0.54
DDR1-244ENST00000482873 OSBPL3Q9H4L5 887 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 CCDC39Q9UFE4 941 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 SALL3Q9BXA9 1300 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 ARID3AQ99856 593 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
DDR1-244ENST00000482873 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
DDR1-244ENST00000482873 PIP4K2AP48426 406 aaPredicted RBP18.44■□□□□ 0.54
DDR1-244ENST00000482873 OS9Q13438 667 aaPredicted RBP18.44■□□□□ 0.54
DDR1-244ENST00000482873 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
DDR1-244ENST00000482873 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
DDR1-244ENST00000482873 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
DDR1-244ENST00000482873 SLC39A6Q13433 755 aa18.43■□□□□ 0.54
DDR1-244ENST00000482873 ANKRD24Q8TF21 1146 aa18.43■□□□□ 0.54
DDR1-244ENST00000482873 DYNC1I1O14576 645 aa18.43■□□□□ 0.54
DDR1-244ENST00000482873 RHPN1Q8TCX5 695 aa18.43■□□□□ 0.54
DDR1-244ENST00000482873 C1orf141Q5JVX7 400 aa18.42■□□□□ 0.54
DDR1-244ENST00000482873 MBD3O95983 291 aa18.42■□□□□ 0.54
DDR1-244ENST00000482873 BRD1O95696 1058 aa18.41■□□□□ 0.54
DDR1-244ENST00000482873 BEND3Q5T5X7 828 aa18.41■□□□□ 0.54
DDR1-244ENST00000482873 MAP3K2Q9Y2U5 619 aa18.41■□□□□ 0.54
DDR1-244ENST00000482873 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
DDR1-244ENST00000482873 SASS6Q6UVJ0 657 aa18.41■□□□□ 0.54
DDR1-244ENST00000482873 SSH3Q8TE77 659 aa18.41■□□□□ 0.54
DDR1-244ENST00000482873 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
DDR1-244ENST00000482873 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
DDR1-244ENST00000482873 DDX54Q8TDD1 881 aaKnown RBP18.4■□□□□ 0.54
DDR1-244ENST00000482873 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
DDR1-244ENST00000482873 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
DDR1-244ENST00000482873 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.54
DDR1-244ENST00000482873 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.54
DDR1-244ENST00000482873 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.54
DDR1-244ENST00000482873 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.54
DDR1-244ENST00000482873 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
DDR1-244ENST00000482873 MARF1Q9Y4F3 1742 aaKnown RBP18.39■□□□□ 0.53
DDR1-244ENST00000482873 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
DDR1-244ENST00000482873 MYL6BP14649 208 aa18.38■□□□□ 0.53
DDR1-244ENST00000482873 CPA1P15085 419 aa18.38■□□□□ 0.53
DDR1-244ENST00000482873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-244ENST00000482873 PXDNQ92626 1479 aa18.38■□□□□ 0.53
DDR1-244ENST00000482873 PTMAP06454 111 aaKnown RBP18.38■□□□□ 0.53
DDR1-244ENST00000482873 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
DDR1-244ENST00000482873 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms