RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
COL9A2-207ENST00000482722 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL9A2-207ENST00000482722 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
COL9A2-207ENST00000482722 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
COL9A2-207ENST00000482722 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
COL9A2-207ENST00000482722 TTC21AQ8NDW8 1320 aa17.29■□□□□ 0.36
COL9A2-207ENST00000482722 USP31Q70CQ4 1352 aa17.29■□□□□ 0.36
COL9A2-207ENST00000482722 ERC2O15083 957 aa17.29■□□□□ 0.36
COL9A2-207ENST00000482722 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
COL9A2-207ENST00000482722 RGS12O14924 1447 aa17.28■□□□□ 0.36
COL9A2-207ENST00000482722 BRD1O95696 1058 aa17.28■□□□□ 0.36
COL9A2-207ENST00000482722 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL9A2-207ENST00000482722 HMGN5P82970 282 aaKnown RBP17.28■□□□□ 0.36
COL9A2-207ENST00000482722 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
COL9A2-207ENST00000482722 EXOC6BQ9Y2D4 811 aa17.28■□□□□ 0.36
COL9A2-207ENST00000482722 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
COL9A2-207ENST00000482722 USP25Q9UHP3 1055 aa17.27■□□□□ 0.36
COL9A2-207ENST00000482722 FLT4P35916 1363 aa17.27■□□□□ 0.35
COL9A2-207ENST00000482722 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
COL9A2-207ENST00000482722 PTPRCP08575 1304 aa17.26■□□□□ 0.35
COL9A2-207ENST00000482722 GADD45BO75293 160 aaPredicted RBP17.26■□□□□ 0.35
COL9A2-207ENST00000482722 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
COL9A2-207ENST00000482722 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
COL9A2-207ENST00000482722 GTPBP4Q9BZE4 634 aaKnown RBP17.26■□□□□ 0.35
COL9A2-207ENST00000482722 KIF3AQ9Y496 699 aa17.26■□□□□ 0.35
COL9A2-207ENST00000482722 XRN1Q8IZH2 1706 aaKnown RBP17.25■□□□□ 0.35
COL9A2-207ENST00000482722 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
COL9A2-207ENST00000482722 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
COL9A2-207ENST00000482722 UPF3BQ9BZI7 483 aaKnown RBP17.25■□□□□ 0.35
COL9A2-207ENST00000482722 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
COL9A2-207ENST00000482722 HMMRO75330 724 aa17.25■□□□□ 0.35
COL9A2-207ENST00000482722 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
COL9A2-207ENST00000482722 SBNO1A3KN83 1393 aa17.24■□□□□ 0.35
COL9A2-207ENST00000482722 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
COL9A2-207ENST00000482722 PDE1AP54750 535 aa17.24■□□□□ 0.35
COL9A2-207ENST00000482722 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
COL9A2-207ENST00000482722 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
COL9A2-207ENST00000482722 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
COL9A2-207ENST00000482722 ADCY5O95622 1261 aa17.23■□□□□ 0.35
COL9A2-207ENST00000482722 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
COL9A2-207ENST00000482722 KIAA0232Q92628 1395 aa17.23■□□□□ 0.35
COL9A2-207ENST00000482722 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
COL9A2-207ENST00000482722 RILPL2Q969X0 211 aa17.23■□□□□ 0.35
COL9A2-207ENST00000482722 ANO2Q9NQ90 1003 aa17.23■□□□□ 0.35
COL9A2-207ENST00000482722 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-207ENST00000482722 CHD2O14647 1828 aaKnown RBP17.22■□□□□ 0.35
COL9A2-207ENST00000482722 PHF14O94880 888 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 SPTLC3Q9NUV7 552 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 CRB1P82279 1406 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 DTNBO60941 627 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
COL9A2-207ENST00000482722 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
COL9A2-207ENST00000482722 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
COL9A2-207ENST00000482722 AXIN2Q9Y2T1 843 aa17.21■□□□□ 0.35
COL9A2-207ENST00000482722 CUL4AQ13619 759 aa17.21■□□□□ 0.35
COL9A2-207ENST00000482722 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
COL9A2-207ENST00000482722 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
COL9A2-207ENST00000482722 KIF20AO95235 890 aa17.2■□□□□ 0.34
COL9A2-207ENST00000482722 GNAI2P04899 355 aa17.2■□□□□ 0.34
COL9A2-207ENST00000482722 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
COL9A2-207ENST00000482722 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
COL9A2-207ENST00000482722 PDCL2Q8N4E4 241 aa17.2■□□□□ 0.34
COL9A2-207ENST00000482722 GCP02774 474 aa17.19■□□□□ 0.34
COL9A2-207ENST00000482722 HCLS1P14317 486 aaPredicted RBP17.19■□□□□ 0.34
COL9A2-207ENST00000482722 LARP6Q9BRS8 491 aaKnown RBP17.19■□□□□ 0.34
COL9A2-207ENST00000482722 TCHHQ07283 1943 aa17.19■□□□□ 0.34
COL9A2-207ENST00000482722 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 LETM1O95202 739 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-207ENST00000482722 FLIIQ13045 1269 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 KRT28Q7Z3Y7 464 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 ESYT1Q9BSJ8 1104 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 FGD1P98174 961 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 MCM2P49736 904 aa17.18■□□□□ 0.34
COL9A2-207ENST00000482722 KCNQ3O43525 872 aa17.17■□□□□ 0.34
COL9A2-207ENST00000482722 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
COL9A2-207ENST00000482722 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
COL9A2-207ENST00000482722 IGSF3O75054 1194 aa17.17■□□□□ 0.34
COL9A2-207ENST00000482722 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.342e-8■■■□□ 16.3
COL9A2-207ENST00000482722 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
COL9A2-207ENST00000482722 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
COL9A2-207ENST00000482722 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
COL9A2-207ENST00000482722 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
COL9A2-207ENST00000482722 INTS4Q96HW7 963 aaKnown RBP17.16■□□□□ 0.34
COL9A2-207ENST00000482722 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
COL9A2-207ENST00000482722 ANXA1P04083 346 aa17.16■□□□□ 0.34
COL9A2-207ENST00000482722 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
COL9A2-207ENST00000482722 CCDC183Q5T5S1 534 aa17.16■□□□□ 0.34
COL9A2-207ENST00000482722 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
COL9A2-207ENST00000482722 IP6K1Q92551 441 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 IL25Q9H293 177 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 ADGRL3Q9HAR2 1447 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 PYCARDQ9ULZ3 195 aa17.15■□□□□ 0.34
COL9A2-207ENST00000482722 KDM4AO75164 1064 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms