RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	NSD3	Q9BZ95	1437 aa		11.92	□□□□□ -0.5
UBE2F-222	ENST00000482096	WASHC2A	Q641Q2	1341 aa		11.91	□□□□□ -0.5
UBE2F-222	ENST00000482096	AMIGO3	Q86WK7	504 aa		11.91	□□□□□ -0.5
UBE2F-222	ENST00000482096	AK7	Q96M32	723 aa		11.91	□□□□□ -0.5
UBE2F-222	ENST00000482096	POTEB2	H3BUK9	544 aa		11.9	□□□□□ -0.5
UBE2F-222	ENST00000482096	PPM1G	O15355	546 aa	Predicted RBP	11.9	□□□□□ -0.5
UBE2F-222	ENST00000482096	EYA1	Q99502	592 aa		11.9	□□□□□ -0.5
UBE2F-222	ENST00000482096	C5	P01031	1676 aa		11.9	□□□□□ -0.5
UBE2F-222	ENST00000482096	KIF20B	Q96Q89	1820 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	LOC102724428	A0A0B4J2F2	783 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	SSFA2	P28290	1259 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	SIK1	P57059	783 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	TRIM26	Q12899	539 aa	Predicted RBP	11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	SMIM5	Q71RC9	77 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	POLK	Q9UBT6	870 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	TIMELESS	Q9UNS1	1208 aa		11.89	□□□□□ -0.51
UBE2F-222	ENST00000482096	PHF14	O94880	888 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	C3orf67	Q6ZVT6	689 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	IFNL2	Q8IZJ0	200 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	LINC00116	Q8NCU8	138 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	CRISPLD2	Q9H0B8	497 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	TMOD3	Q9NYL9	352 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	ASAP1	Q9ULH1	1129 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	C4B	P0C0L5	1744 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	PKD1L3	Q7Z443	1732 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	TOGARAM1	Q9Y4F4	1720 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	TAF1L	Q8IZX4	1826 aa		11.88	□□□□□ -0.51
UBE2F-222	ENST00000482096	GOLGB1	Q14789	3259 aa	Known RBP	11.87	□□□□□ -0.51
UBE2F-222	ENST00000482096	POTEJ	P0CG39	1038 aa		11.87	□□□□□ -0.51
UBE2F-222	ENST00000482096	PHKG2	P15735	406 aa		11.87	□□□□□ -0.51
UBE2F-222	ENST00000482096	LARP6	Q9BRS8	491 aa	Known RBP	11.87	□□□□□ -0.51
UBE2F-222	ENST00000482096	ATP10D	Q9P241	1426 aa		11.86	□□□□□ -0.51
UBE2F-222	ENST00000482096	ITPK1	Q13572	414 aa		11.86	□□□□□ -0.51
UBE2F-222	ENST00000482096	ITGB4	P16144	1822 aa		11.86	□□□□□ -0.51
UBE2F-222	ENST00000482096	IGSF1	Q8N6C5	1336 aa		11.86	□□□□□ -0.51
UBE2F-222	ENST00000482096	ADCY9	O60503	1353 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	PLEKHG2	Q9H7P9	1386 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	PDE4A	P27815	886 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	ATP6V1A	P38606	617 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	EIF4A2	Q14240	407 aa	Known RBP	11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	TMEM92	Q6UXU6	159 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	ATG3	Q9NT62	314 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	WDR70	Q9NW82	654 aa		11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	MAP2	P11137	1827 aa	Known RBP	11.85	□□□□□ -0.51
UBE2F-222	ENST00000482096	ANKRD26	Q9UPS8	1709 aa		11.84	□□□□□ -0.51
UBE2F-222	ENST00000482096	GNPAT	O15228	680 aa		11.84	□□□□□ -0.51
UBE2F-222	ENST00000482096	TMC2	Q8TDI7	906 aa		11.84	□□□□□ -0.51
UBE2F-222	ENST00000482096	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.84	□□□□□ -0.51
UBE2F-222	ENST00000482096	UBR3	Q6ZT12	1888 aa		11.84	□□□□□ -0.51
UBE2F-222	ENST00000482096	C2orf72	A6NCS6	295 aa		11.82	□□□□□ -0.52
UBE2F-222	ENST00000482096	ERVV-2	B6SEH9	535 aa		11.82	□□□□□ -0.52
UBE2F-222	ENST00000482096	TNNT2	P45379	298 aa	Predicted RBP	11.82	□□□□□ -0.52
UBE2F-222	ENST00000482096	SLC4A9	Q96Q91	983 aa		11.82	□□□□□ -0.52
UBE2F-222	ENST00000482096	GPHN	Q9NQX3	736 aa	Predicted RBP	11.82	□□□□□ -0.52
UBE2F-222	ENST00000482096	WWC3	Q9ULE0	1092 aa		11.82	□□□□□ -0.52
UBE2F-222	ENST00000482096	KDR	P35968	1356 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	HSP90AB1	P08238	724 aa	Known RBP	11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	MMP10	P09238	476 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	TRAPPC3L	Q5T215	181 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	RC3H1	Q5TC82	1133 aa	Known RBP	11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	NLGN1	Q8N2Q7	840 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	DDX27	Q96GQ7	796 aa	Known RBP	11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	DCAF5	Q96JK2	942 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	POLR3GL	Q9BT43	218 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	RTCB	Q9Y3I0	505 aa	Known RBP	11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	CLSPN	Q9HAW4	1339 aa		11.81	□□□□□ -0.52
UBE2F-222	ENST00000482096	TGFB2	P61812	414 aa		11.8	□□□□□ -0.52
UBE2F-222	ENST00000482096	MFSD10	Q14728	455 aa		11.8	□□□□□ -0.52
UBE2F-222	ENST00000482096	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.8	□□□□□ -0.52
UBE2F-222	ENST00000482096	ZNF526	Q8TF50	670 aa	Predicted RBP	11.8	□□□□□ -0.52
UBE2F-222	ENST00000482096	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.8	□□□□□ -0.52
UBE2F-222	ENST00000482096	RPS6KA4	O75676	772 aa		11.79	□□□□□ -0.52
UBE2F-222	ENST00000482096	HSPA6	P17066	643 aa		11.79	□□□□□ -0.52
UBE2F-222	ENST00000482096	AMOT	Q4VCS5	1084 aa		11.79	□□□□□ -0.52
UBE2F-222	ENST00000482096	ARHGEF1	Q92888	912 aa	Known RBP	11.79	□□□□□ -0.52
UBE2F-222	ENST00000482096	PANK3	Q9H999	370 aa		11.79	□□□□□ -0.52
UBE2F-222	ENST00000482096	CNTNAP4	Q9C0A0	1308 aa		11.79	□□□□□ -0.52
UBE2F-222	ENST00000482096	PXDNL	A1KZ92	1463 aa		11.78	□□□□□ -0.52
UBE2F-222	ENST00000482096	KIF3C	O14782	793 aa		11.78	□□□□□ -0.52
UBE2F-222	ENST00000482096	CABP4	P57796	275 aa		11.78	□□□□□ -0.52
UBE2F-222	ENST00000482096	DSG2	Q14126	1118 aa		11.78	□□□□□ -0.52
UBE2F-222	ENST00000482096	PPP1R15B	Q5SWA1	713 aa		11.78	□□□□□ -0.52
UBE2F-222	ENST00000482096	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.78	□□□□□ -0.52
UBE2F-222	ENST00000482096	GYS1	P13807	737 aa		11.77	□□□□□ -0.53
UBE2F-222	ENST00000482096	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
UBE2F-222	ENST00000482096	KDM6A	O15550	1401 aa	Predicted RBP	11.77	□□□□□ -0.53
UBE2F-222	ENST00000482096	ZNF831	Q5JPB2	1677 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096		A0A0G2JLW4	131 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	HSPA5	P11021	654 aa	Known RBP	11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	RFC4	P35249	363 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	MTHFS	P49914	203 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	CCDC87	Q9NVE4	849 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	BCS1L	Q9Y276	419 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	C10orf71	Q711Q0	1435 aa		11.76	□□□□□ -0.53
UBE2F-222	ENST00000482096	CIC	Q96RK0	1608 aa	Predicted RBP	11.75	□□□□□ -0.53
UBE2F-222	ENST00000482096	DPEP1	P16444	411 aa		11.75	□□□□□ -0.53
UBE2F-222	ENST00000482096	C1orf141	Q5JVX7	400 aa		11.75	□□□□□ -0.53
UBE2F-222	ENST00000482096	IFFO2	Q5TF58	517 aa		11.75	□□□□□ -0.53
UBE2F-222	ENST00000482096	MORC1	Q86VD1	984 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms