RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 DPYSL4O14531 572 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 IL2RBP14784 551 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 R3HDM1Q15032 1099 aaKnown RBP5.79□□□□□ -1.48
VPS13D-208ENST00000481484 EZH2Q15910 746 aaKnown RBP5.79□□□□□ -1.48
VPS13D-208ENST00000481484 E2F4Q16254 413 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 FAM182BQ5T319 152 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 DMRTA1Q5VZB9 504 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 ZDHHC16Q969W1 377 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 COG3Q96JB2 828 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 TSHZ2Q9NRE2 1034 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 WDR70Q9NW82 654 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 NCAPD2Q15021 1401 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 ZNF831Q5JPB2 1677 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 ITGB4P16144 1822 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 EXOC5O00471 708 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 NME9Q86XW9 330 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS13D-208ENST00000481484 ANKRD24Q8TF21 1146 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 TOGARAM1Q9Y4F4 1720 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 PCDHGA10Q9Y5H3 936 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 MEGF6O75095 1541 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 NSD2O96028 1365 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 MAP3K5Q99683 1374 aa5.78□□□□□ -1.48
VPS13D-208ENST00000481484 NSD3Q9BZ95 1437 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 ST20-MTHFSA0A0A6YYL1 179 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 PHF14O94880 888 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 ADGRD1Q6QNK2 874 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 MARCH10Q8NA82 808 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-208ENST00000481484 IP6K1Q92551 441 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 SLC4A5Q9BY07 1137 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 ADAM33Q9BZ11 813 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 SPON1Q9HCB6 807 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 NLRP2Q9NX02 1062 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 INSRP06213 1382 aa5.77□□□□□ -1.49
VPS13D-208ENST00000481484 CICQ96RK0 1608 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-208ENST00000481484 GOLGB1Q14789 3259 aaKnown RBP5.77□□□□□ -1.49
VPS13D-208ENST00000481484 MAP3K19Q56UN5 1328 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 SPDYE16A6NNV3 312 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-208ENST00000481484 HRO43593 1189 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 PTPREP23469 700 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 PDIA6Q15084 440 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 RNF166Q96A37 237 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-208ENST00000481484 KCNK17Q96T54 332 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 SLC12A5Q9H2X9 1139 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 STK32BQ9NY57 414 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 PPP1R1BQ9UD71 204 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-208ENST00000481484 UBR3Q6ZT12 1888 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 UTRNP46939 3433 aa5.76□□□□□ -1.49
VPS13D-208ENST00000481484 PCDH11XQ9BZA7 1347 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 PCDH11YQ9BZA8 1340 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 KCNQ2O43526 872 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 HOXC9P31274 260 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 AMPHP49418 695 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 SLC27A3Q5K4L6 730 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 TYW1BQ6NUM6 668 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 FBXW7Q969H0 707 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 EPAS1Q99814 870 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 VPS9D1Q9Y2B5 631 aa5.75□□□□□ -1.49
VPS13D-208ENST00000481484 VIRMAQ69YN4 1812 aaKnown RBP5.75□□□□□ -1.49
VPS13D-208ENST00000481484 C4BP0C0L5 1744 aa5.74□□□□□ -1.49
VPS13D-208ENST00000481484 PLCB2Q00722 1185 aa5.74□□□□□ -1.49
VPS13D-208ENST00000481484 TXNRD1Q16881 649 aa5.74□□□□□ -1.49
VPS13D-208ENST00000481484 MTFR1LQ9H019 292 aa5.74□□□□□ -1.49
VPS13D-208ENST00000481484 COL5A3P25940 1745 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-208ENST00000481484 BHMG1C9JSJ3 638 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-208ENST00000481484 SLC15A2Q16348 729 aa5.73□□□□□ -1.49
VPS13D-208ENST00000481484 SLC16A10Q8TF71 515 aa5.73□□□□□ -1.49
VPS13D-208ENST00000481484 RAPGEF4Q8WZA2 1011 aa5.73□□□□□ -1.49
VPS13D-208ENST00000481484 ZBED2Q9BTP6 218 aa5.73□□□□□ -1.49
VPS13D-208ENST00000481484 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
VPS13D-208ENST00000481484 DDX12PQ92771 950 aa5.72□□□□□ -1.49
VPS13D-208ENST00000481484 SCN11AQ9UI33 1791 aa5.72□□□□□ -1.49
VPS13D-208ENST00000481484 KIF13BQ9NQT8 1826 aa5.71□□□□□ -1.49
VPS13D-208ENST00000481484 PPP1R3GB7ZBB8 358 aa5.71□□□□□ -1.5
VPS13D-208ENST00000481484 FYB1O15117 783 aa5.71□□□□□ -1.5
VPS13D-208ENST00000481484 TATP17735 454 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-208ENST00000481484 C6orf132Q5T0Z8 1188 aa5.71□□□□□ -1.5
VPS13D-208ENST00000481484 C4AP0C0L4 1744 aa5.71□□□□□ -1.5
VPS13D-208ENST00000481484 PALLDQ8WX93 1383 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 COL9A1P20849 921 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 POLD1P28340 1107 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 EIF4G2P78344 907 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS13D-208ENST00000481484 ARHGEF1Q92888 912 aaKnown RBP5.7□□□□□ -1.5
VPS13D-208ENST00000481484 SMARCC1Q92922 1105 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-208ENST00000481484 LTV1Q96GA3 475 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-208ENST00000481484 ACSBG1Q96GR2 724 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 GGNBP2Q9H3C7 697 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 WASHC2AQ641Q2 1341 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 MRC1P22897 1456 aa5.7□□□□□ -1.5
VPS13D-208ENST00000481484 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
VPS13D-208ENST00000481484 RRS1Q15050 365 aaKnown RBP5.69□□□□□ -1.5
VPS13D-208ENST00000481484 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
VPS13D-208ENST00000481484 FLAD1Q8NFF5 587 aa5.69□□□□□ -1.5
VPS13D-208ENST00000481484 BRCA1P38398 1863 aaKnown RBP5.68□□□□□ -1.5
VPS13D-208ENST00000481484 UBR2Q8IWV8 1755 aa5.68□□□□□ -1.5
VPS13D-208ENST00000481484 ZBTB7AO95365 584 aa5.68□□□□□ -1.5
VPS13D-208ENST00000481484 YY1P25490 414 aa5.68□□□□□ -1.5
VPS13D-208ENST00000481484 NBR1Q14596 966 aa5.68□□□□□ -1.5
VPS13D-208ENST00000481484 ZNF827Q17R98 1081 aa5.68□□□□□ -1.5
VPS13D-208ENST00000481484 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms