RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 STARD3NLO95772 234 aa17.24■□□□□ 0.35
HDAC1-207ENST00000481281 MMP10P09238 476 aa17.24■□□□□ 0.35
HDAC1-207ENST00000481281 TAF7Q15545 349 aaPredicted RBP17.24■□□□□ 0.35
HDAC1-207ENST00000481281 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
HDAC1-207ENST00000481281 LAMB4A4D0S4 1761 aa17.24■□□□□ 0.35
HDAC1-207ENST00000481281 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
HDAC1-207ENST00000481281 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
HDAC1-207ENST00000481281 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
HDAC1-207ENST00000481281 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
HDAC1-207ENST00000481281 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
HDAC1-207ENST00000481281 EIF5P55010 431 aaKnown RBP17.21■□□□□ 0.35
HDAC1-207ENST00000481281 THUMPD2Q9BTF0 503 aaKnown RBP17.21■□□□□ 0.35
HDAC1-207ENST00000481281 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
HDAC1-207ENST00000481281 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
HDAC1-207ENST00000481281 CANXP27824 592 aaKnown RBP17.2■□□□□ 0.34
HDAC1-207ENST00000481281 RIPK4P57078 832 aa17.2■□□□□ 0.34
HDAC1-207ENST00000481281 FKBP8Q14318 412 aa17.2■□□□□ 0.34
HDAC1-207ENST00000481281 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
HDAC1-207ENST00000481281 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
HDAC1-207ENST00000481281 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
HDAC1-207ENST00000481281 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
HDAC1-207ENST00000481281 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
HDAC1-207ENST00000481281 MIS18AQ9NYP9 233 aa17.19■□□□□ 0.34
HDAC1-207ENST00000481281 BCORQ6W2J9 1755 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 CHD4Q14839 1912 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 ZPR1O75312 459 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
HDAC1-207ENST00000481281 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 USPL1Q5W0Q7 1092 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
HDAC1-207ENST00000481281 A1BGP04217 495 aa17.17■□□□□ 0.34
HDAC1-207ENST00000481281 DDR1Q08345 913 aa17.17■□□□□ 0.34
HDAC1-207ENST00000481281 BCL2L12Q9HB09 334 aa17.17■□□□□ 0.34
HDAC1-207ENST00000481281 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
HDAC1-207ENST00000481281 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
HDAC1-207ENST00000481281 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
HDAC1-207ENST00000481281 A0A087WZG4 1122 aa17.16■□□□□ 0.34
HDAC1-207ENST00000481281 TM4SF1P30408 202 aa17.16■□□□□ 0.34
HDAC1-207ENST00000481281 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
HDAC1-207ENST00000481281 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
HDAC1-207ENST00000481281 EIF4A1P60842 406 aaKnown RBP17.15■□□□□ 0.34
HDAC1-207ENST00000481281 GPR162Q16538 588 aa17.15■□□□□ 0.34
HDAC1-207ENST00000481281 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
HDAC1-207ENST00000481281 BRCA1P38398 1863 aaKnown RBP17.14■□□□□ 0.33
HDAC1-207ENST00000481281 POLRMTO00411 1230 aaKnown RBP17.14■□□□□ 0.33
HDAC1-207ENST00000481281 GIGYF1O75420 1035 aaPredicted RBP17.14■□□□□ 0.33
HDAC1-207ENST00000481281 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDAC1-207ENST00000481281 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
HDAC1-207ENST00000481281 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
HDAC1-207ENST00000481281 NFIXQ14938 502 aa17.13■□□□□ 0.33
HDAC1-207ENST00000481281 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
HDAC1-207ENST00000481281 NBPF26B4DH59 902 aa17.12■□□□□ 0.33
HDAC1-207ENST00000481281 ANP32CO43423 234 aa17.12■□□□□ 0.33
HDAC1-207ENST00000481281 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
HDAC1-207ENST00000481281 TGFB2P61812 414 aa17.12■□□□□ 0.33
HDAC1-207ENST00000481281 NBPF10Q6P3W6 841 aaKnown RBP17.12■□□□□ 0.33
HDAC1-207ENST00000481281 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
HDAC1-207ENST00000481281 NBPF15Q8N660 670 aa17.12■□□□□ 0.33
HDAC1-207ENST00000481281 TSPYL4Q9UJ04 414 aa17.12■□□□□ 0.33
HDAC1-207ENST00000481281 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
HDAC1-207ENST00000481281 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
HDAC1-207ENST00000481281 YY1P25490 414 aa17.11■□□□□ 0.33
HDAC1-207ENST00000481281 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
HDAC1-207ENST00000481281 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
HDAC1-207ENST00000481281 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
HDAC1-207ENST00000481281 CHL1O00533 1208 aa17.09■□□□□ 0.33
HDAC1-207ENST00000481281 APAF1O14727 1248 aa17.09■□□□□ 0.33
HDAC1-207ENST00000481281 GRIN3BO60391 1043 aa17.09■□□□□ 0.33
HDAC1-207ENST00000481281 DLEC1Q9Y238 1755 aa17.09■□□□□ 0.33
HDAC1-207ENST00000481281 UTRNP46939 3433 aa17.09■□□□□ 0.33
HDAC1-207ENST00000481281 RGL2O15211 777 aa17.08■□□□□ 0.32
HDAC1-207ENST00000481281 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.32
HDAC1-207ENST00000481281 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
HDAC1-207ENST00000481281 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 ERBB4Q15303 1308 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 A0A0G2JLW4 131 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 SERPINB2P05120 415 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 DPEP1P16444 411 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
HDAC1-207ENST00000481281 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
HDAC1-207ENST00000481281 KCNA3P22001 575 aa17.05■□□□□ 0.32
HDAC1-207ENST00000481281 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
HDAC1-207ENST00000481281 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
HDAC1-207ENST00000481281 WWC3Q9ULE0 1092 aa17.05■□□□□ 0.32
HDAC1-207ENST00000481281 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
HDAC1-207ENST00000481281 NUP98P52948 1817 aa17.04■□□□□ 0.32
HDAC1-207ENST00000481281 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
HDAC1-207ENST00000481281 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.32
HDAC1-207ENST00000481281 CHRNA5P30532 468 aa17.02■□□□□ 0.32
HDAC1-207ENST00000481281 PDIA6Q15084 440 aa17.02■□□□□ 0.32
HDAC1-207ENST00000481281 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
HDAC1-207ENST00000481281 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
HDAC1-207ENST00000481281 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.32
HDAC1-207ENST00000481281 SETDB2Q96T68 719 aa17.02■□□□□ 0.32
HDAC1-207ENST00000481281 LAS1LQ9Y4W2 734 aaKnown RBP17.02■□□□□ 0.32
HDAC1-207ENST00000481281 MYL6BP14649 208 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms