RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 ATXN7O15265 892 aaPredicted RBP7.92□□□□□ -1.14
CCNL1-223ENST00000481173 CD33P20138 364 aa7.92□□□□□ -1.14
CCNL1-223ENST00000481173 DGKGP49619 791 aa7.92□□□□□ -1.14
CCNL1-223ENST00000481173 SIRT1Q96EB6 747 aa7.92□□□□□ -1.14
CCNL1-223ENST00000481173 NIFKQ9BYG3 293 aaKnown RBP7.92□□□□□ -1.14
CCNL1-223ENST00000481173 CHIC2Q9UKJ5 165 aa7.92□□□□□ -1.14
CCNL1-223ENST00000481173 A0A1W2PNR3 127 aa7.91□□□□□ -1.14
CCNL1-223ENST00000481173 CHRNA4P43681 627 aa7.91□□□□□ -1.14
CCNL1-223ENST00000481173 ARSJQ5FYB0 599 aaPredicted RBP7.91□□□□□ -1.14
CCNL1-223ENST00000481173 CD163Q86VB7 1156 aa7.91□□□□□ -1.14
CCNL1-223ENST00000481173 KLF15Q9UIH9 416 aa7.91□□□□□ -1.14
CCNL1-223ENST00000481173 KHNYNO15037 678 aaKnown RBP7.9□□□□□ -1.14
CCNL1-223ENST00000481173 MAPTP10636 758 aaKnown RBP7.9□□□□□ -1.14
CCNL1-223ENST00000481173 SMTNP53814 917 aa7.9□□□□□ -1.14
CCNL1-223ENST00000481173 CHSY3Q70JA7 882 aa7.9□□□□□ -1.14
CCNL1-223ENST00000481173 NLRP8Q86W28 1048 aa7.9□□□□□ -1.14
CCNL1-223ENST00000481173 C1orf216Q8TAB5 229 aa7.9□□□□□ -1.14
CCNL1-223ENST00000481173 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
CCNL1-223ENST00000481173 USP3Q9Y6I4 520 aa7.9□□□□□ -1.14
CCNL1-223ENST00000481173 PIK3R2O00459 728 aa7.89□□□□□ -1.15
CCNL1-223ENST00000481173 TNP2Q05952 138 aa7.89□□□□□ -1.15
CCNL1-223ENST00000481173 FCHSD1Q86WN1 690 aa7.89□□□□□ -1.15
CCNL1-223ENST00000481173 Q8N3U1 123 aa7.89□□□□□ -1.15
CCNL1-223ENST00000481173 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
CCNL1-223ENST00000481173 GDPD2Q9HCC8 539 aa7.89□□□□□ -1.15
CCNL1-223ENST00000481173 ADH6P28332 368 aa7.88□□□□□ -1.15
CCNL1-223ENST00000481173 ABL2P42684 1182 aa7.88□□□□□ -1.15
CCNL1-223ENST00000481173 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
CCNL1-223ENST00000481173 TPRNQ4KMQ1 711 aa7.88□□□□□ -1.15
CCNL1-223ENST00000481173 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
CCNL1-223ENST00000481173 NOP53Q9NZM5 478 aaKnown RBP7.88□□□□□ -1.15
CCNL1-223ENST00000481173 TMEM229AB2RXF0 380 aa7.87□□□□□ -1.15
CCNL1-223ENST00000481173 NBPF1Q3BBV0 1214 aa7.87□□□□□ -1.15
CCNL1-223ENST00000481173 CABP1Q9NZU7 370 aa7.87□□□□□ -1.15
CCNL1-223ENST00000481173 A6NJY4 79 aa7.86□□□□□ -1.15
CCNL1-223ENST00000481173 TATP17735 454 aaPredicted RBP7.86□□□□□ -1.15
CCNL1-223ENST00000481173 MAP7D1Q3KQU3 841 aa7.86□□□□□ -1.15
CCNL1-223ENST00000481173 ZIC5Q96T25 663 aa7.86□□□□□ -1.15
CCNL1-223ENST00000481173 IQSEC3Q9UPP2 1182 aaPredicted RBP7.86□□□□□ -1.15
CCNL1-223ENST00000481173 PARP3Q9Y6F1 533 aa7.86□□□□□ -1.15
CCNL1-223ENST00000481173 GJA3Q9Y6H8 435 aa7.86□□□□□ -1.15
CCNL1-223ENST00000481173 DOC2BQ14184 412 aa7.85□□□□□ -1.15
CCNL1-223ENST00000481173 FAM182BQ5T319 152 aa7.85□□□□□ -1.15
CCNL1-223ENST00000481173 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
CCNL1-223ENST00000481173 STRN4Q9NRL3 753 aa7.85□□□□□ -1.15
CCNL1-223ENST00000481173 PRR12Q9ULL5 1215 aa7.85□□□□□ -1.15
CCNL1-223ENST00000481173 PIK3CDO00329 1044 aa7.84□□□□□ -1.15
CCNL1-223ENST00000481173 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
CCNL1-223ENST00000481173 MTFR1Q15390 333 aa7.84□□□□□ -1.15
CCNL1-223ENST00000481173 SLC4A9Q96Q91 983 aa7.84□□□□□ -1.15
CCNL1-223ENST00000481173 ZDHHC3Q9NYG2 299 aa7.84□□□□□ -1.15
CCNL1-223ENST00000481173 CDK2AP1O14519 115 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 FAM157BP0CG42 384 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 ITGB7P26010 798 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 TXLNAP40222 546 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 ZNF468Q5VIY5 522 aaPredicted RBP7.83□□□□□ -1.16
CCNL1-223ENST00000481173 BICDL1Q6ZP65 573 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
CCNL1-223ENST00000481173 AVENQ9NQS1 362 aaPredicted RBP7.83□□□□□ -1.16
CCNL1-223ENST00000481173 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
CCNL1-223ENST00000481173 WASHC4Q2M389 1173 aa7.81□□□□□ -1.16
CCNL1-223ENST00000481173 MARK1Q9P0L2 795 aa7.81□□□□□ -1.16
CCNL1-223ENST00000481173 EFSO43281 561 aa7.8□□□□□ -1.16
CCNL1-223ENST00000481173 ZDHHC1Q8WTX9 485 aa7.8□□□□□ -1.16
CCNL1-223ENST00000481173 GATA4P43694 442 aa7.79□□□□□ -1.16
CCNL1-223ENST00000481173 PSME1Q06323 249 aa7.79□□□□□ -1.16
CCNL1-223ENST00000481173 SAMD5Q5TGI4 173 aa7.79□□□□□ -1.16
CCNL1-223ENST00000481173 LRRC69Q6ZNQ3 347 aa7.79□□□□□ -1.16
CCNL1-223ENST00000481173 SYT9Q86SS6 491 aa7.79□□□□□ -1.16
CCNL1-223ENST00000481173 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCNL1-223ENST00000481173 ELOA3CA0A087WX78 387 aaPredicted RBP7.78□□□□□ -1.16
CCNL1-223ENST00000481173 ELOA3DA6NLF2 546 aaPredicted RBP7.78□□□□□ -1.16
CCNL1-223ENST00000481173 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 SKIP12755 728 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 SOX11P35716 441 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 GTF2IP78347 998 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 EML3Q32P44 896 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 ELOA3BQ3SY89 546 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 ELOA3Q8NG57 546 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 ZNF358Q9NW07 568 aa7.78□□□□□ -1.16
CCNL1-223ENST00000481173 SCHIP1Q9P0W5 487 aaPredicted RBP7.78□□□□□ -1.16
CCNL1-223ENST00000481173 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
CCNL1-223ENST00000481173 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
CCNL1-223ENST00000481173 BACH1O14867 736 aa7.76□□□□□ -1.17
CCNL1-223ENST00000481173 PRKCSHP14314 528 aaPredicted RBP7.76□□□□□ -1.17
CCNL1-223ENST00000481173 ALAS2P22557 587 aa7.76□□□□□ -1.17
CCNL1-223ENST00000481173 LAMC2Q13753 1193 aa7.76□□□□□ -1.17
CCNL1-223ENST00000481173 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
CCNL1-223ENST00000481173 NOS2P35228 1153 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 SFSWAPQ12872 951 aaKnown RBP7.75□□□□□ -1.17
CCNL1-223ENST00000481173 NCOA4Q13772 614 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 MCM6Q14566 821 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 ZMYM1Q5SVZ6 1142 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 SH3PXD2AQ5TCZ1 1133 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 SLC9A9Q8IVB4 645 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
CCNL1-223ENST00000481173 SLC30A3Q99726 388 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms